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Items: 8

1.

Long-read sequencing of nascent RNA reveals coupling among RNA processing events.

Herzel L, Straube K, Neugebauer KM.

Genome Res. 2018 Jul;28(7):1008-1019. doi: 10.1101/gr.232025.117. Epub 2018 Jun 14.

2.

Evolutionary Convergence of Pathway-Specific Enzyme Expression Stoichiometry.

Lalanne JB, Taggart JC, Guo MS, Herzel L, Schieler A, Li GW.

Cell. 2018 Apr 19;173(3):749-761.e38. doi: 10.1016/j.cell.2018.03.007. Epub 2018 Mar 29.

3.

Splicing and transcription touch base: co-transcriptional spliceosome assembly and function.

Herzel L, Ottoz DSM, Alpert T, Neugebauer KM.

Nat Rev Mol Cell Biol. 2017 Oct;18(10):637-650. doi: 10.1038/nrm.2017.63. Epub 2017 Aug 9. Review.

4.

Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition.

Despic V, Dejung M, Gu M, Krishnan J, Zhang J, Herzel L, Straube K, Gerstein MB, Butter F, Neugebauer KM.

Genome Res. 2017 Jul;27(7):1184-1194. doi: 10.1101/gr.215954.116. Epub 2017 Apr 5.

5.

Perfect timing: splicing and transcription rates in living cells.

Alpert T, Herzel L, Neugebauer KM.

Wiley Interdiscip Rev RNA. 2017 Mar;8(2). doi: 10.1002/wrna.1401. Epub 2016 Nov 21. Review.

6.

Splicing of Nascent RNA Coincides with Intron Exit from RNA Polymerase II.

Oesterreich FC, Herzel L, Straube K, Hujer K, Howard J, Neugebauer KM.

Cell. 2016 Apr 7;165(2):372-381. doi: 10.1016/j.cell.2016.02.045. Epub 2016 Mar 24.

7.

Quantification of co-transcriptional splicing from RNA-Seq data.

Herzel L, Neugebauer KM.

Methods. 2015 Sep 1;85:36-43. doi: 10.1016/j.ymeth.2015.04.024. Epub 2015 Apr 27.

PMID:
25929182
8.

Counting on co-transcriptional splicing.

Brugiolo M, Herzel L, Neugebauer KM.

F1000Prime Rep. 2013 Apr 2;5:9. doi: 10.12703/P5-9. Print 2013.

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