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Items: 42

1.

A microfluidic device for inferring metabolic landscapes in yeast monolayer colonies.

Marinkovic ZS, Vulin C, Acman M, Song X, Di Meglio JM, Lindner AB, Hersen P.

Elife. 2019 Jul 1;8. pii: e47951. doi: 10.7554/eLife.47951.

2.

Hyperosmotic Stress Response Memory is Modulated by Gene Positioning in Yeast.

Meriem ZB, Khalil Y, Hersen P, Fabre E.

Cells. 2019 Jun 13;8(6). pii: E582. doi: 10.3390/cells8060582.

3.

Identification of individual cells from z-stacks of bright-field microscopy images.

Lugagne JB, Jain S, Ivanovitch P, Ben Meriem Z, Vulin C, Fracassi C, Batt G, Hersen P.

Sci Rep. 2018 Jul 30;8(1):11455. doi: 10.1038/s41598-018-29647-5.

4.

Balancing a genetic toggle switch by real-time feedback control and periodic forcing.

Lugagne JB, Sosa Carrillo S, Kirch M, Köhler A, Batt G, Hersen P.

Nat Commun. 2017 Nov 17;8(1):1671. doi: 10.1038/s41467-017-01498-0.

5.

Erratum: Long-range self-organization of cytoskeletal myosin II filament stacks.

Hu S, Dasbiswas K, Guo Z, Tee YH, Thiagarajan V, Hersen P, Chew TL, Safran SA, Zaidel-Bar R, Bershadsky AD.

Nat Cell Biol. 2017 Mar 1;19(3):258. doi: 10.1038/ncb3479. No abstract available.

PMID:
28248306
6.

Long-term tracking of budding yeast cells in brightfield microscopy: CellStar and the Evaluation Platform.

Versari C, Stoma S, Batmanov K, Llamosi A, Mroz F, Kaczmarek A, Deyell M, Lhoussaine C, Hersen P, Batt G.

J R Soc Interface. 2017 Feb;14(127). pii: 20160705. doi: 10.1098/rsif.2016.0705.

7.

Long-range self-organization of cytoskeletal myosin II filament stacks.

Hu S, Dasbiswas K, Guo Z, Tee YH, Thiagarajan V, Hersen P, Chew TL, Safran SA, Zaidel-Bar R, Bershadsky AD.

Nat Cell Biol. 2017 Feb;19(2):133-141. doi: 10.1038/ncb3466. Epub 2017 Jan 23. Erratum in: Nat Cell Biol. 2017 Mar 1;19(3):258.

PMID:
28114270
8.

Out-of-equilibrium stationary states, percolation, and subcritical instabilities in a fully nonconservative system.

Génois M, Hersen P, Bertin E, Courrech du Pont S, Grégoire G.

Phys Rev E. 2016 Oct;94(4-1):042101. Epub 2016 Oct 3.

PMID:
27841529
9.

Age-Related Changes in Locomotor Performance Reveal a Similar Pattern for Caenorhabditis elegans, Mus domesticus, Canis familiaris, Equus caballus, and Homo sapiens.

Marck A, Berthelot G, Foulonneau V, Marc A, Antero-Jacquemin J, Noirez P, Bronikowski AM, Morgan TJ, Garland T Jr, Carter PA, Hersen P, Di Meglio JM, Toussaint JF.

J Gerontol A Biol Sci Med Sci. 2017 Apr 1;72(4):455-463. doi: 10.1093/gerona/glw136.

10.

What Population Reveals about Individual Cell Identity: Single-Cell Parameter Estimation of Models of Gene Expression in Yeast.

Llamosi A, Gonzalez-Vargas AM, Versari C, Cinquemani E, Ferrari-Trecate G, Hersen P, Batt G.

PLoS Comput Biol. 2016 Feb 9;12(2):e1004706. doi: 10.1371/journal.pcbi.1004706. eCollection 2016 Feb.

11.

Combining Spinach-tagged RNA and gene localization to image gene expression in live yeast.

Guet D, Burns LT, Maji S, Boulanger J, Hersen P, Wente SR, Salamero J, Dargemont C.

Nat Commun. 2015 Nov 19;6:8882. doi: 10.1038/ncomms9882.

12.

Structured illumination microscopy reveals focal adhesions are composed of linear subunits.

Hu S, Tee YH, Kabla A, Zaidel-Bar R, Bershadsky A, Hersen P.

Cytoskeleton (Hoboken). 2015 May;72(5):235-45. doi: 10.1002/cm.21223.

PMID:
26012525
13.

In silico control of biomolecular processes.

Uhlendorf J, Miermont A, Delaveau T, Charvin G, Fages F, Bottani S, Hersen P, Batt G.

Methods Mol Biol. 2015;1244:277-85. doi: 10.1007/978-1-4939-1878-2_13.

PMID:
25487102
14.

High transcript levels of heat-shock genes are associated with shorter lifespan of Caenorhabditis elegans.

Manière X, Krisko A, Pellay FX, Di Meglio JM, Hersen P, Matic I.

Exp Gerontol. 2014 Dec;60:12-7. doi: 10.1016/j.exger.2014.09.005. Epub 2014 Sep 16.

15.

Microfluidic platforms for generating dynamic environmental perturbations to study the responses of single yeast cells.

Bisaria A, Hersen P, McClean MN.

Methods Mol Biol. 2014;1205:111-29. doi: 10.1007/978-1-4939-1363-3_8.

PMID:
25213242
16.

Growing yeast into cylindrical colonies.

Vulin C, Di Meglio JM, Lindner AB, Daerr A, Murray A, Hersen P.

Biophys J. 2014 May 20;106(10):2214-21. doi: 10.1016/j.bpj.2014.02.040.

17.

Micropatterned porous membranes for combinatorial cell-based assays.

Vulin C, Evenou F, Di Meglio JM, Hersen P.

Methods Cell Biol. 2014;121:155-69. doi: 10.1016/B978-0-12-800281-0.00011-7.

PMID:
24560509
18.

Severe osmotic compression triggers a slowdown of intracellular signaling, which can be explained by molecular crowding.

Miermont A, Waharte F, Hu S, McClean MN, Bottani S, Léon S, Hersen P.

Proc Natl Acad Sci U S A. 2013 Apr 2;110(14):5725-30. doi: 10.1073/pnas.1215367110. Epub 2013 Mar 14.

19.

Long-term model predictive control of gene expression at the population and single-cell levels.

Uhlendorf J, Miermont A, Delaveau T, Charvin G, Fages F, Bottani S, Batt G, Hersen P.

Proc Natl Acad Sci U S A. 2012 Aug 28;109(35):14271-6. doi: 10.1073/pnas.1206810109. Epub 2012 Aug 14.

20.

Emerging modes of collective cell migration induced by geometrical constraints.

Vedula SR, Leong MC, Lai TL, Hersen P, Kabla AJ, Lim CT, Ladoux B.

Proc Natl Acad Sci U S A. 2012 Aug 7;109(32):12974-9. doi: 10.1073/pnas.1119313109. Epub 2012 Jul 19.

21.

Locomotion control of Caenorhabditis elegans through confinement.

Lebois F, Sauvage P, Py C, Cardoso O, Ladoux B, Hersen P, Di Meglio JM.

Biophys J. 2012 Jun 20;102(12):2791-8. doi: 10.1016/j.bpj.2012.04.051. Epub 2012 Jun 19.

22.

Cell crawling mediates collective cell migration to close undamaged epithelial gaps.

Anon E, Serra-Picamal X, Hersen P, Gauthier NC, Sheetz MP, Trepat X, Ladoux B.

Proc Natl Acad Sci U S A. 2012 Jul 3;109(27):10891-6. doi: 10.1073/pnas.1117814109. Epub 2012 Jun 18.

23.

Evidence of a large-scale mechanosensing mechanism for cellular adaptation to substrate stiffness.

Trichet L, Le Digabel J, Hawkins RJ, Vedula SR, Gupta M, Ribrault C, Hersen P, Voituriez R, Ladoux B.

Proc Natl Acad Sci U S A. 2012 May 1;109(18):6933-8. doi: 10.1073/pnas.1117810109. Epub 2012 Apr 16.

24.

Micro-patterned porous substrates for cell-based assays.

Evenou F, Di Meglio JM, Ladoux B, Hersen P.

Lab Chip. 2012 May 7;12(9):1717-22. doi: 10.1039/c2lc20696j. Epub 2012 Mar 21.

PMID:
22434338
25.

Magnetic micropillars as a tool to govern substrate deformations.

le Digabel J, Biais N, Fresnais J, Berret JF, Hersen P, Ladoux B.

Lab Chip. 2011 Aug 7;11(15):2630-6. doi: 10.1039/c1lc20263d. Epub 2011 Jun 15.

PMID:
21674117
26.

The Dynamical Systems Properties of the HOG Signaling Cascade.

Miermont A, Uhlendorf J, McClean M, Hersen P.

J Signal Transduct. 2011;2011:930940. doi: 10.1155/2011/930940. Epub 2011 Feb 7.

27.

Measuring in vivo signaling kinetics in a mitogen-activated kinase pathway using dynamic input stimulation.

McClean MN, Hersen P, Ramanathan S.

Methods Mol Biol. 2011;734:101-19. doi: 10.1007/978-1-61779-086-7_6.

PMID:
21468987
28.

Traction forces exerted by epithelial cell sheets.

Saez A, Anon E, Ghibaudo M, du Roure O, Di Meglio JM, Hersen P, Silberzan P, Buguin A, Ladoux B.

J Phys Condens Matter. 2010 May 19;22(19):194119. doi: 10.1088/0953-8984/22/19/194119. Epub 2010 Apr 26.

PMID:
21386442
29.

Biophysics: Push it, pull it.

Hersen P, Ladoux B.

Nature. 2011 Feb 17;470(7334):340-1. doi: 10.1038/470340a. No abstract available.

PMID:
21331032
30.

Running worms: C. elegans self-sorting by electrotaxis.

Manière X, Lebois F, Matic I, Ladoux B, Di Meglio JM, Hersen P.

PLoS One. 2011 Feb 4;6(2):e16637. doi: 10.1371/journal.pone.0016637.

31.

Mechanics of cell spreading within 3D-micropatterned environments.

Ghibaudo M, Di Meglio JM, Hersen P, Ladoux B.

Lab Chip. 2011 Mar 7;11(5):805-12. doi: 10.1039/c0lc00221f. Epub 2010 Dec 6.

PMID:
21132213
32.

Towards real-time control of gene expression: controlling the HOG signaling cascade.

Uhlendorf J, Bottani S, Fages F, Hersen P, Batt G.

Pac Symp Biocomput. 2011:338-49.

33.

Strength dependence of cadherin-mediated adhesions.

Ladoux B, Anon E, Lambert M, Rabodzey A, Hersen P, Buguin A, Silberzan P, Mège RM.

Biophys J. 2010 Feb 17;98(4):534-42. doi: 10.1016/j.bpj.2009.10.044.

34.

Substrate topography induces a crossover from 2D to 3D behavior in fibroblast migration.

Ghibaudo M, Trichet L, Le Digabel J, Richert A, Hersen P, Ladoux B.

Biophys J. 2009 Jul 8;97(1):357-68. doi: 10.1016/j.bpj.2009.04.024.

35.

In vivo measurement of signaling cascade dynamics.

McClean MN, Hersen P, Ramanathan S.

Cell Cycle. 2009 Feb 1;8(3):373-6. Epub 2009 Feb 17. Review.

PMID:
19177008
36.

[Dynamic analysis of cell signalling: the example of the Saccharomyces cerevisiae osmotic response].

Hersen P, McClean M, Ramanathan S.

Med Sci (Paris). 2008 Dec;24(12):1020-2. doi: 10.1051/medsci/200824121020. French. No abstract available.

37.

Signal processing by the HOG MAP kinase pathway.

Hersen P, McClean MN, Mahadevan L, Ramanathan S.

Proc Natl Acad Sci U S A. 2008 May 20;105(20):7165-70. doi: 10.1073/pnas.0710770105. Epub 2008 May 14.

38.

Genetic drift at expanding frontiers promotes gene segregation.

Hallatschek O, Hersen P, Ramanathan S, Nelson DR.

Proc Natl Acad Sci U S A. 2007 Dec 11;104(50):19926-30. Epub 2007 Dec 4.

39.

Song of the dunes as a self-synchronized instrument.

Douady S, Manning A, Hersen P, Elbelrhiti H, Protière S, Daerr A, Kabbachi B.

Phys Rev Lett. 2006 Jul 7;97(1):018002. Epub 2006 Jul 7.

PMID:
16907409
40.

Polygons on a rotating fluid surface.

Jansson TR, Haspang MP, Jensen KH, Hersen P, Bohr T.

Phys Rev Lett. 2006 May 5;96(17):174502. Epub 2006 May 3. Erratum in: Phys Rev Lett. 2007 Jan 26;98(4):049901.

PMID:
16712302
41.

Corridors of barchan dunes: Stability and size selection.

Hersen P, Andersen KH, Elbelrhiti H, Andreotti B, Claudin P, Douady S.

Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Jan;69(1 Pt 1):011304. Epub 2004 Jan 29.

PMID:
14995611
42.

Relevant length scale of barchan dunes.

Hersen P, Douady S, Andreotti B.

Phys Rev Lett. 2002 Dec 23;89(26):264301. Epub 2002 Dec 9.

PMID:
12484824

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