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From Root to Tips: Sporulation Evolution and Specialization in Bacillus subtilis and the Intestinal Pathogen Clostridioides difficile.

Ramos-Silva P, Serrano M, Henriques AO.

Mol Biol Evol. 2019 Dec 1;36(12):2714-2736. doi: 10.1093/molbev/msz175.


Temporal and spatial regulation of protein cross-linking by the pre-assembled substrates of a Bacillus subtilis spore coat transglutaminase.

Fernandes CG, Martins D, Hernandez G, Sousa AL, Freitas C, Tranfield EM, Cordeiro TN, Serrano M, Moran CP Jr, Henriques AO.

PLoS Genet. 2019 Apr 8;15(4):e1007912. doi: 10.1371/journal.pgen.1007912. eCollection 2019 Apr.


Genomic Study of a Clostridium difficile Multidrug Resistant Outbreak-Related Clone Reveals Novel Determinants of Resistance.

Isidro J, Menezes J, Serrano M, Borges V, Paixão P, Mimoso M, Martins F, Toscano C, Santos A, Henriques AO, Oleastro M.

Front Microbiol. 2018 Dec 6;9:2994. doi: 10.3389/fmicb.2018.02994. eCollection 2018.


A LysM Domain Intervenes in Sequential Protein-Protein and Protein-Peptidoglycan Interactions Important for Spore Coat Assembly in Bacillus subtilis.

Pereira FC, Nunes F, Cruz F, Fernandes C, Isidro AL, Lousa D, Soares CM, Moran CP Jr, Henriques AO, Serrano M.

J Bacteriol. 2019 Jan 28;201(4). pii: e00642-18. doi: 10.1128/JB.00642-18. Print 2019 Feb 15.


SpoVID functions as a non-competitive hub that connects the modules for assembly of the inner and outer spore coat layers in Bacillus subtilis.

Nunes F, Fernandes C, Freitas C, Marini E, Serrano M, Moran CP Jr, Eichenberger P, Henriques AO.

Mol Microbiol. 2018 Nov;110(4):576-595. doi: 10.1111/mmi.14116. Epub 2018 Oct 18.


Autoregulation of SafA Assembly through Recruitment of a Protein Cross-Linking Enzyme.

Fernandes CG, Moran CP Jr, Henriques AO.

J Bacteriol. 2018 Jun 25;200(14). pii: e00066-18. doi: 10.1128/JB.00066-18. Print 2018 Jul 15.


Imipenem Resistance in Clostridium difficile Ribotype 017, Portugal.

Isidro J, Santos A, Nunes A, Borges V, Silva C, Vieira L, Mendes AL, Serrano M, Henriques AO, Gomes JP, Oleastro M.

Emerg Infect Dis. 2018 Apr;24(4):741-745. doi: 10.3201/eid2404.170095.


Genetic Competence Drives Genome Diversity in Bacillus subtilis.

Brito PH, Chevreux B, Serra CR, Schyns G, Henriques AO, Pereira-Leal JB.

Genome Biol Evol. 2018 Jan 1;10(1):108-124. doi: 10.1093/gbe/evx270.


Albumin-binding domain from Streptococcus zooepidemicus protein Zag as a novel strategy to improve the half-life of therapeutic proteins.

Cantante C, Lourenço S, Morais M, Leandro J, Gano L, Silva N, Leandro P, Serrano M, Henriques AO, Andre A, Cunha-Santos C, Fontes C, Correia JDG, Aires-da-Silva F, Goncalves J.

J Biotechnol. 2017 Jul 10;253:23-33. doi: 10.1016/j.jbiotec.2017.05.017. Epub 2017 May 24.


A Recombination Directionality Factor Controls the Cell Type-Specific Activation of σK and the Fidelity of Spore Development in Clostridium difficile.

Serrano M, Kint N, Pereira FC, Saujet L, Boudry P, Dupuy B, Henriques AO, Martin-Verstraete I.

PLoS Genet. 2016 Sep 15;12(9):e1006312. doi: 10.1371/journal.pgen.1006312. eCollection 2016 Sep.


A Fluorescent Reporter for Single Cell Analysis of Gene Expression in Clostridium difficile.

Cassona CP, Pereira F, Serrano M, Henriques AO.

Methods Mol Biol. 2016;1476:69-90. doi: 10.1007/978-1-4939-6361-4_6.


The SpoIIQ-SpoIIIAH complex of Clostridium difficile controls forespore engulfment and late stages of gene expression and spore morphogenesis.

Serrano M, Crawshaw AD, Dembek M, Monteiro JM, Pereira FC, Pinho MG, Fairweather NF, Salgado PS, Henriques AO.

Mol Microbiol. 2016 Apr;100(1):204-28. doi: 10.1111/mmi.13311. Epub 2016 Feb 12.


Sporulation Temperature Reveals a Requirement for CotE in the Assembly of both the Coat and Exosporium Layers of Bacillus cereus Spores.

Bressuire-Isoard C, Bornard I, Henriques AO, Carlin F, Broussolle V.

Appl Environ Microbiol. 2015 Oct 23;82(1):232-43. doi: 10.1128/AEM.02626-15. Print 2016 Jan 1.


Structural and Functional Characterization of an Ancient Bacterial Transglutaminase Sheds Light on the Minimal Requirements for Protein Cross-Linking.

Fernandes CG, Plácido D, Lousa D, Brito JA, Isidro A, Soares CM, Pohl J, Carrondo MA, Archer M, Henriques AO.

Biochemistry. 2015 Sep 22;54(37):5723-34. doi: 10.1021/acs.biochem.5b00661. Epub 2015 Sep 8.


Rethinking the Niche of Upper-Atmosphere Bacteria: Draft Genome Sequences of Bacillus aryabhattai C765 and Bacillus aerophilus C772, Isolated from Rice Fields.

Ramos-Silva P, Brito PH, Serrano M, Henriques AO, Pereira-Leal JB.

Genome Announc. 2015 Apr 9;3(2). pii: e00094-15. doi: 10.1128/genomeA.00094-15.


Dual-specificity anti-sigma factor reinforces control of cell-type specific gene expression in Bacillus subtilis.

Serrano M, Gao J, Bota J, Bate AR, Meisner J, Eichenberger P, Moran CP Jr, Henriques AO.

PLoS Genet. 2015 Apr 2;11(4):e1005104. doi: 10.1371/journal.pgen.1005104. eCollection 2015 Apr.


Chemical shift assignments and secondary structure determination of the ectodomain of Bacillus subtilis morphogenic protein RodZ.

Pereira AC, Paiva A, Saraiva IH, Costa T, Henriques AO, Matzapetakis M.

Biomol NMR Assign. 2015 Oct;9(2):285-8. doi: 10.1007/s12104-014-9593-8. Epub 2014 Dec 11.


Sporulation during growth in a gut isolate of Bacillus subtilis.

Serra CR, Earl AM, Barbosa TM, Kolter R, Henriques AO.

J Bacteriol. 2014 Dec;196(23):4184-96. doi: 10.1128/JB.01993-14. Epub 2014 Sep 15.


A conserved cysteine residue of Bacillus subtilis SpoIIIJ is important for endospore development.

Côrte L, Valente F, Serrano M, Gomes CM, Moran CP Jr, Henriques AO.

PLoS One. 2014 Aug 18;9(8):e99811. doi: 10.1371/journal.pone.0099811. eCollection 2014.


A mother cell-to-forespore channel: current understanding and future challenges.

Crawshaw AD, Serrano M, Stanley WA, Henriques AO, Salgado PS.

FEMS Microbiol Lett. 2014 Sep;358(2):129-36. doi: 10.1111/1574-6968.12554. Epub 2014 Aug 28. Review.


The regulatory network controlling spore formation in Clostridium difficile.

Saujet L, Pereira FC, Henriques AO, Martin-Verstraete I.

FEMS Microbiol Lett. 2014 Sep;358(1):1-10. doi: 10.1111/1574-6968.12540. Epub 2014 Aug 12. Review.


The spore differentiation pathway in the enteric pathogen Clostridium difficile.

Pereira FC, Saujet L, Tomé AR, Serrano M, Monot M, Couture-Tosi E, Martin-Verstraete I, Dupuy B, Henriques AO.

PLoS Genet. 2013;9(10):e1003782. doi: 10.1371/journal.pgen.1003782. Epub 2013 Oct 3.


Genome-wide analysis of cell type-specific gene transcription during spore formation in Clostridium difficile.

Saujet L, Pereira FC, Serrano M, Soutourina O, Monot M, Shelyakin PV, Gelfand MS, Dupuy B, Henriques AO, Martin-Verstraete I.

PLoS Genet. 2013;9(10):e1003756. doi: 10.1371/journal.pgen.1003756. Epub 2013 Oct 3.


Adaptive strategies and pathogenesis of Clostridium difficile from in vivo transcriptomics.

Janoir C, Denève C, Bouttier S, Barbut F, Hoys S, Caleechum L, Chapetón-Montes D, Pereira FC, Henriques AO, Collignon A, Monot M, Dupuy B.

Infect Immun. 2013 Oct;81(10):3757-69. doi: 10.1128/IAI.00515-13. Epub 2013 Jul 29. Erratum in: Infect Immun. 2014 Feb;82(2):914.


Genome of a Gut Strain of Bacillus subtilis.

Schyns G, Serra CR, Lapointe T, Pereira-Leal JB, Potot S, Fickers P, Perkins JB, Wyss M, Henriques AO.

Genome Announc. 2013 Jan;1(1). pii: e00184-12. doi: 10.1128/genomeA.00184-12. Epub 2013 Feb 14.


A genomic signature and the identification of new sporulation genes.

Abecasis AB, Serrano M, Alves R, Quintais L, Pereira-Leal JB, Henriques AO.

J Bacteriol. 2013 May;195(9):2101-15. doi: 10.1128/JB.02110-12. Epub 2013 Feb 8.


Different antibiotic resistance and sporulation properties within multiclonal Clostridium difficile PCR ribotypes 078, 126, and 033 in a single calf farm.

Zidaric V, Pardon B, Dos Vultos T, Deprez P, Brouwer MS, Roberts AP, Henriques AO, Rupnik M.

Appl Environ Microbiol. 2012 Dec;78(24):8515-22. doi: 10.1128/AEM.02185-12. Epub 2012 Sep 21.


Physical interaction between coat morphogenetic proteins SpoVID and CotE is necessary for spore encasement in Bacillus subtilis.

de Francesco M, Jacobs JZ, Nunes F, Serrano M, McKenney PT, Chua MH, Henriques AO, Eichenberger P.

J Bacteriol. 2012 Sep;194(18):4941-50. doi: 10.1128/JB.00914-12. Epub 2012 Jul 6.


A negative feedback loop that limits the ectopic activation of a cell type-specific sporulation sigma factor of Bacillus subtilis.

Serrano M, Real G, Santos J, Carneiro J, Moran CP Jr, Henriques AO.

PLoS Genet. 2011 Sep;7(9):e1002220. doi: 10.1371/journal.pgen.1002220. Epub 2011 Sep 15.


Display of recombinant proteins on Bacillus subtilis spores, using a coat-associated enzyme as the carrier.

Potot S, Serra CR, Henriques AO, Schyns G.

Appl Environ Microbiol. 2010 Sep;76(17):5926-33. doi: 10.1128/AEM.01103-10. Epub 2010 Jul 2.


The coat morphogenetic protein SpoVID is necessary for spore encasement in Bacillus subtilis.

Wang KH, Isidro AL, Domingues L, Eskandarian HA, McKenney PT, Drew K, Grabowski P, Chua MH, Barry SN, Guan M, Bonneau R, Henriques AO, Eichenberger P.

Mol Microbiol. 2009 Nov;74(3):634-49. doi: 10.1111/j.1365-2958.2009.06886.x. Epub 2009 Sep 22.


Novel secretion apparatus maintains spore integrity and developmental gene expression in Bacillus subtilis.

Doan T, Morlot C, Meisner J, Serrano M, Henriques AO, Moran CP Jr, Rudner DZ.

PLoS Genet. 2009 Jul;5(7):e1000566. doi: 10.1371/journal.pgen.1000566. Epub 2009 Jul 17.


Evidence for a dual role of PBP1 in the cell division and cell separation of Staphylococcus aureus.

Pereira SF, Henriques AO, Pinho MG, de Lencastre H, Tomasz A.

Mol Microbiol. 2009 May;72(4):895-904. doi: 10.1111/j.1365-2958.2009.06687.x. Epub 2009 Apr 27.


RodZ, a component of the bacterial core morphogenic apparatus.

Alyahya SA, Alexander R, Costa T, Henriques AO, Emonet T, Jacobs-Wagner C.

Proc Natl Acad Sci U S A. 2009 Jan 27;106(4):1239-44. doi: 10.1073/pnas.0810794106. Epub 2009 Jan 21.


Processing of a membrane protein required for cell-to-cell signaling during endospore formation in Bacillus subtilis.

Serrano M, Vieira F, Moran CP Jr, Henriques AO.

J Bacteriol. 2008 Dec;190(23):7786-96. doi: 10.1128/JB.00715-08. Epub 2008 Sep 26.


A channel connecting the mother cell and forespore during bacterial endospore formation.

Meisner J, Wang X, Serrano M, Henriques AO, Moran CP Jr.

Proc Natl Acad Sci U S A. 2008 Sep 30;105(39):15100-5. doi: 10.1073/pnas.0806301105. Epub 2008 Sep 23.


Auto-induction and purification of a Bacillus subtilis transglutaminase (Tgl) and its preliminary crystallographic characterization.

Plácido D, Fernandes CG, Isidro A, Carrondo MA, Henriques AO, Archer M.

Protein Expr Purif. 2008 May;59(1):1-8. doi: 10.1016/j.pep.2007.12.004. Epub 2007 Dec 25.


CotC-CotU heterodimerization during assembly of the Bacillus subtilis spore coat.

Isticato R, Pelosi A, Zilhão R, Baccigalupi L, Henriques AO, De Felice M, Ricca E.

J Bacteriol. 2008 Feb;190(4):1267-75. Epub 2007 Dec 7.


Structure, assembly, and function of the spore surface layers.

Henriques AO, Moran CP Jr.

Annu Rev Microbiol. 2007;61:555-88. Review.


Determinants for the subcellular localization and function of a nonessential SEDS protein.

Real G, Fay A, Eldar A, Pinto SM, Henriques AO, Dworkin J.

J Bacteriol. 2008 Jan;190(1):363-76. Epub 2007 Nov 2.


Role of PBP1 in cell division of Staphylococcus aureus.

Pereira SF, Henriques AO, Pinho MG, de Lencastre H, Tomasz A.

J Bacteriol. 2007 May;189(9):3525-31. Epub 2007 Feb 16.


The timing of cotE expression affects Bacillus subtilis spore coat morphology but not lysozyme resistance.

Costa T, Serrano M, Steil L, Völker U, Moran CP Jr, Henriques AO.

J Bacteriol. 2007 Mar;189(6):2401-10. Epub 2006 Dec 15.


Interaction between coat morphogenetic proteins SafA and SpoVID.

Costa T, Isidro AL, Moran CP Jr, Henriques AO.

J Bacteriol. 2006 Nov;188(22):7731-41. Epub 2006 Sep 1.


Requirement for the cell division protein DivIB in polar cell division and engulfment during sporulation in Bacillus subtilis.

Thompson LS, Beech PL, Real G, Henriques AO, Harry EJ.

J Bacteriol. 2006 Nov;188(21):7677-85. Epub 2006 Aug 25.


Modulation of the viral ATPase activity by the portal protein correlates with DNA packaging efficiency.

Oliveira L, Henriques AO, Tavares P.

J Biol Chem. 2006 Aug 4;281(31):21914-23. Epub 2006 May 30.


The intestinal life cycle of Bacillus subtilis and close relatives.

Tam NK, Uyen NQ, Hong HA, Duc le H, Hoa TT, Serra CR, Henriques AO, Cutting SM.

J Bacteriol. 2006 Apr;188(7):2692-700.


Assembly and function of a spore coat-associated transglutaminase of Bacillus subtilis.

Zilhão R, Isticato R, Martins LO, Steil L, Völker U, Ricca E, Moran CP Jr, Henriques AO.

J Bacteriol. 2005 Nov;187(22):7753-64.


A gene encoding a holin-like protein involved in spore morphogenesis and spore germination in Bacillus subtilis.

Real G, Pinto SM, Schyns G, Costa T, Henriques AO, Moran CP Jr.

J Bacteriol. 2005 Sep;187(18):6443-53.


A procedure for high-yield spore production by Bacillus subtilis.

Monteiro SM, Clemente JJ, Henriques AO, Gomes RJ, Carrondo MJ, Cunha AE.

Biotechnol Prog. 2005 Jul-Aug;21(4):1026-31.


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