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Items: 22

1.

Microevolutionary traits and comparative population genomics of the emerging pathogenic fungus Cryptococcus gattii.

Farrer RA, Voelz K, Henk DA, Johnston SA, Fisher MC, May RC, Cuomo CA.

Philos Trans R Soc Lond B Biol Sci. 2016 Dec 5;371(1709). pii: 20160021. doi: 10.1098/rstb.2016.0021.

2.
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Transmission of Hypervirulence traits via sexual reproduction within and between lineages of the human fungal pathogen cryptococcus gattii.

Voelz K, Ma H, Phadke S, Byrnes EJ, Zhu P, Mueller O, Farrer RA, Henk DA, Lewit Y, Hsueh YP, Fisher MC, Idnurm A, Heitman J, May RC.

PLoS Genet. 2013;9(9):e1003771. doi: 10.1371/journal.pgen.1003771. Epub 2013 Sep 5.

4.

Chromosomal copy number variation, selection and uneven rates of recombination reveal cryptic genome diversity linked to pathogenicity.

Farrer RA, Henk DA, Garner TW, Balloux F, Woodhams DC, Fisher MC.

PLoS Genet. 2013;9(8):e1003703. doi: 10.1371/journal.pgen.1003703. Epub 2013 Aug 15.

5.

Using false discovery rates to benchmark SNP-callers in next-generation sequencing projects.

Farrer RA, Henk DA, MacLean D, Studholme DJ, Fisher MC.

Sci Rep. 2013;3:1512. doi: 10.1038/srep01512.

6.

Clonality despite sex: the evolution of host-associated sexual neighborhoods in the pathogenic fungus Penicillium marneffei.

Henk DA, Shahar-Golan R, Devi KR, Boyce KJ, Zhan N, Fedorova ND, Nierman WC, Hsueh PR, Yuen KY, Sieu TP, Kinh NV, Wertheim H, Baker SG, Day JN, Vanittanakom N, Bignell EM, Andrianopoulos A, Fisher MC.

PLoS Pathog. 2012;8(10):e1002851. doi: 10.1371/journal.ppat.1002851. Epub 2012 Oct 4.

7.

Emerging fungal threats to animal, plant and ecosystem health.

Fisher MC, Henk DA, Briggs CJ, Brownstein JS, Madoff LC, McCraw SL, Gurr SJ.

Nature. 2012 Apr 11;484(7393):186-94. doi: 10.1038/nature10947. Review.

8.

Sex, drugs and recombination: the wild life of Aspergillus.

Fisher MC, Henk DA.

Mol Ecol. 2012 Mar;21(6):1305-6. doi: 10.1111/j.1365-294X.2012.05506.x.

PMID:
22393930
9.
10.

Multiple emergences of genetically diverse amphibian-infecting chytrids include a globalized hypervirulent recombinant lineage.

Farrer RA, Weinert LA, Bielby J, Garner TW, Balloux F, Clare F, Bosch J, Cunningham AA, Weldon C, du Preez LH, Anderson L, Pond SL, Shahar-Golan R, Henk DA, Fisher MC.

Proc Natl Acad Sci U S A. 2011 Nov 15;108(46):18732-6. doi: 10.1073/pnas.1111915108. Epub 2011 Nov 7.

11.

Speciation despite globally overlapping distributions in Penicillium chrysogenum: the population genetics of Alexander Fleming's lucky fungus.

Henk DA, Eagle CE, Brown K, Van Den Berg MA, Dyer PS, Peterson SW, Fisher MC.

Mol Ecol. 2011 Oct;20(20):4288-301. doi: 10.1111/j.1365-294X.2011.05244.x. Epub 2011 Sep 23.

PMID:
21951491
12.

Genetic diversity, recombination, and divergence in animal associated Penicillium dipodomyis.

Henk DA, Fisher MC.

PLoS One. 2011;6(8):e22883. doi: 10.1371/journal.pone.0022883. Epub 2011 Aug 5.

13.

Population genetic structure of clinical and environmental isolates of Blastomyces dermatitidis, based on 27 polymorphic microsatellite markers.

Meece JK, Anderson JL, Fisher MC, Henk DA, Sloss BL, Reed KD.

Appl Environ Microbiol. 2011 Aug;77(15):5123-31. doi: 10.1128/AEM.00258-11. Epub 2011 Jun 24.

14.

Low diversity Cryptococcus neoformans variety grubii multilocus sequence types from Thailand are consistent with an ancestral African origin.

Simwami SP, Khayhan K, Henk DA, Aanensen DM, Boekhout T, Hagen F, Brouwer AE, Harrison TS, Donnelly CA, Fisher MC.

PLoS Pathog. 2011 Apr;7(4):e1001343. doi: 10.1371/journal.ppat.1001343. Epub 2011 Apr 28.

15.

Common reservoirs for Penicillium marneffei infection in humans and rodents, China.

Cao C, Liang L, Wang W, Luo H, Huang S, Liu D, Xu J, Henk DA, Fisher MC.

Emerg Infect Dis. 2011 Feb;17(2):209-14. doi: 10.3201/eid1702.100718.

16.

Factors driving pathogenicity vs. prevalence of amphibian panzootic chytridiomycosis in Iberia.

Walker SF, Bosch J, Gomez V, Garner TW, Cunningham AA, Schmeller DS, Ninyerola M, Henk DA, Ginestet C, Arthur CP, Fisher MC.

Ecol Lett. 2010 Mar;13(3):372-82. doi: 10.1111/j.1461-0248.2009.01434.x. Epub 2010 Jan 27.

PMID:
20132274
18.

Diversity and phylogenetic affinities of foliar fungal endophytes in loblolly pine inferred by culturing and environmental PCR.

Arnold AE, Henk DA, Eells RL, Lutzoni F, Vilgalys R.

Mycologia. 2007 Mar-Apr;99(2):185-206.

PMID:
17682771
19.

An overview of the higher level classification of Pucciniomycotina based on combined analyses of nuclear large and small subunit rDNA sequences.

Aime MC, Matheny PB, Henk DA, Frieders EM, Nilsson RH, Piepenbring M, McLaughlin DJ, Szabo LJ, Begerow D, Sampaio JP, Bauer R, Weiss M, Oberwinkler F, Hibbett D.

Mycologia. 2006 Nov-Dec;98(6):896-905.

PMID:
17486966
20.
21.

Extreme morphological divergence: phylogenetic position of a termite ectoparasite.

Blackwell M, Henk DA, Jones KG.

Mycologia. 2003 Nov-Dec;95(6):987-92.

PMID:
21149006
22.

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