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Items: 1 to 50 of 66

1.

The Role of Localized Acidity Generation in Microbially Influenced Corrosion.

Kryachko Y, Hemmingsen SM.

Curr Microbiol. 2017 Jul;74(7):870-876. doi: 10.1007/s00284-017-1254-6. Epub 2017 Apr 26. Review.

PMID:
28444419
2.

Quantitative molecular diagnostic assays of grain washes for Claviceps purpurea are correlated with visual determinations of ergot contamination.

Comte A, Gräfenhan T, Links MG, Hemmingsen SM, Dumonceaux TJ.

PLoS One. 2017 Mar 3;12(3):e0173495. doi: 10.1371/journal.pone.0173495. eCollection 2017.

3.

Enrichment and identification of biosurfactant-producing oil field microbiota utilizing electron acceptors other than oxygen and nitrate.

Kryachko Y, Semler D, Vogrinetz J, Lemke M, Links MG, McCarthy EL, Haug B, Hemmingsen SM.

J Biotechnol. 2016 Aug 10;231:9-15. doi: 10.1016/j.jbiotec.2016.05.014. Epub 2016 May 19.

PMID:
27212608
4.

A Study of the Vaginal Microbiome in Healthy Canadian Women Utilizing cpn60-Based Molecular Profiling Reveals Distinct Gardnerella Subgroup Community State Types.

Albert AY, Chaban B, Wagner EC, Schellenberg JJ, Links MG, van Schalkwyk J, Reid G, Hemmingsen SM, Hill JE, Money D; VOGUE Research Group.

PLoS One. 2015 Aug 12;10(8):e0135620. doi: 10.1371/journal.pone.0135620. eCollection 2015.

5.

Characterization of the vaginal microbiota of healthy Canadian women through the menstrual cycle.

Chaban B, Links MG, Jayaprakash TP, Wagner EC, Bourque DK, Lohn Z, Albert AY, van Schalkwyk J, Reid G, Hemmingsen SM, Hill JE, Money DM.

Microbiome. 2014 Jul 4;2:23. doi: 10.1186/2049-2618-2-23. eCollection 2014.

6.

mPUMA: a computational approach to microbiota analysis by de novo assembly of operational taxonomic units based on protein-coding barcode sequences.

Links MG, Chaban B, Hemmingsen SM, Muirhead K, Hill JE.

Microbiome. 2013 Aug 15;1(1):23. doi: 10.1186/2049-2618-1-23.

7.

Simultaneous profiling of seed-associated bacteria and fungi reveals antagonistic interactions between microorganisms within a shared epiphytic microbiome on Triticum and Brassica seeds.

Links MG, Demeke T, Gräfenhan T, Hill JE, Hemmingsen SM, Dumonceaux TJ.

New Phytol. 2014 Apr;202(2):542-53. doi: 10.1111/nph.12693. Epub 2014 Jan 21.

8.

The chaperonin-60 universal target is a barcode for bacteria that enables de novo assembly of metagenomic sequence data.

Links MG, Dumonceaux TJ, Hemmingsen SM, Hill JE.

PLoS One. 2012;7(11):e49755. doi: 10.1371/journal.pone.0049755. Epub 2012 Nov 26.

9.

Multiplex detection of bacteria in complex clinical and environmental samples using oligonucleotide-coupled fluorescent microspheres.

Dumonceaux TJ, Town JR, Hill JE, Chaban BL, Hemmingsen SM.

J Vis Exp. 2011 Oct 23;(56). pii: 3344. doi: 10.3791/3344.

10.

Pyrosequencing of chaperonin-60 (cpn60) amplicons as a means of determining microbial community composition.

Schellenberg J, Links MG, Hill JE, Hemmingsen SM, Peters GA, Dumonceaux TJ.

Methods Mol Biol. 2011;733:143-58. doi: 10.1007/978-1-61779-089-8_10.

PMID:
21431768
11.

Novel recombinant monoclonal antibodies for vitellogenin assays in cyprinid fish species.

Rao Y, Zhong L, Liao T, Jin S, Wang Y, Song B, Li J, Zhang X, Hemmingsen SM, Xu Y, Dai H.

Dis Aquat Organ. 2010 Dec 7;93(1):83-91. doi: 10.3354/dao02268.

12.

Essential role for Schizosaccharomyces pombe pik1 in septation.

Park JS, Steinbach SK, Desautels M, Hemmingsen SM.

PLoS One. 2009 Jul 9;4(7):e6179. doi: 10.1371/journal.pone.0006179.

13.

A new fluorescent quantitative PCR-based in vitro neutralization assay for white spot syndrome virus.

Yuan L, Zhang X, Chang M, Jia C, Hemmingsen SM, Dai H.

J Virol Methods. 2007 Dec;146(1-2):96-103. Epub 2007 Jul 23.

PMID:
17645951
14.

Identification of a WSSV neutralizing scFv antibody by phage display technology and in vitro screening.

Yuan L, Zhang X, Xiao N, Dai L, Chen W, Jia C, Zhao R, Hemmingsen SM, Dai H.

Dis Aquat Organ. 2006 Oct 17;72(2):93-9.

15.

Molecular characterization of microbial communities in Canadian pulp and paper activated sludge and quantification of a novel Thiothrix eikelboomii-like bulking filament.

Dumonceaux TJ, Hill JE, Pelletier CP, Paice MG, Van Kessel AG, Hemmingsen SM.

Can J Microbiol. 2006 May;52(5):494-500.

PMID:
16699576
16.

Biochemical and taxonomic characterization of bacteria associated with the crucifer root maggot (Delia radicum).

Lukwinski AT, Hill JE, Khachatourians GG, Hemmingsen SM, Hegedus DD.

Can J Microbiol. 2006 Mar;52(3):197-208.

PMID:
16604116
17.

Characterization of intestinal microbiota and response to dietary virginiamycin supplementation in the broiler chicken.

Dumonceaux TJ, Hill JE, Hemmingsen SM, Van Kessel AG.

Appl Environ Microbiol. 2006 Apr;72(4):2815-23.

19.

Identification of Campylobacter spp. and discrimination from Helicobacter and Arcobacter spp. by direct sequencing of PCR-amplified cpn60 sequences and comparison to cpnDB, a chaperonin reference sequence database.

Hill JE, Paccagnella A, Law K, Melito PL, Woodward DL, Price L, Leung AH, Ng LK, Hemmingsen SM, Goh SH.

J Med Microbiol. 2006 Apr;55(Pt 4):393-9.

PMID:
16533986
20.

Identification of pathogenic Helicobacter species by chaperonin-60 differentiation on plastic DNA arrays.

Masson L, Maynard C, Brousseau R, Goh SH, Hemmingsen SM, Hill JE, Paccagnella A, Oda R, Kimura N.

Genomics. 2006 Jan;87(1):104-12. Epub 2005 Nov 21.

21.

Characterization of vaginal microflora of healthy, nonpregnant women by chaperonin-60 sequence-based methods.

Hill JE, Goh SH, Money DM, Doyle M, Li A, Crosby WL, Links M, Leung A, Chan D, Hemmingsen SM.

Am J Obstet Gynecol. 2005 Sep;193(3 Pt 1):682-92.

PMID:
16150261
22.

Dissecting the domain structure of Cdc4p, a myosin essential light chain involved in Schizosaccharomyces pombe cytokinesis.

Escobar-Cabrera E, Venkatesan M, Desautels M, Hemmingsen SM, McIntosh LP.

Biochemistry. 2005 Sep 13;44(36):12136-48.

PMID:
16142912
23.

Intracellular expression of recombinant antibody fluorescent protein fusions for localization of target antigens in Schizosaccharomyces pombe.

Alting-Mees MA, Risseeuw EP, Liu E, Desautels M, Crosby WA, Hemmingsen SM.

Methods Mol Biol. 2006;313:97-105.

PMID:
16118428
24.

Enumeration of specific bacterial populations in complex intestinal communities using quantitative PCR based on the chaperonin-60 target.

Dumonceaux TJ, Hill JE, Briggs SA, Amoako KK, Hemmingsen SM, Van Kessel AG.

J Microbiol Methods. 2006 Jan;64(1):46-62. Epub 2005 Aug 19.

PMID:
16112762
25.

Biochemical analysis, cpn60 and 16S rDNA sequence data indicate that Streptococcus suis serotypes 32 and 34, isolated from pigs, are Streptococcus orisratti.

Hill JE, Gottschalk M, Brousseau R, Harel J, Hemmingsen SM, Goh SH.

Vet Microbiol. 2005 Apr 25;107(1-2):63-9.

PMID:
15795078
26.

Comparison of ileum microflora of pigs fed corn-, wheat-, or barley-based diets by chaperonin-60 sequencing and quantitative PCR.

Hill JE, Hemmingsen SM, Goldade BG, Dumonceaux TJ, Klassen J, Zijlstra RT, Goh SH, Van Kessel AG.

Appl Environ Microbiol. 2005 Feb;71(2):867-75.

27.

Modeling the structure of the type I peritrophic matrix: characterization of a Mamestra configurata intestinal mucin and a novel peritrophin containing 19 chitin binding domains.

Shi X, Chamankhah M, Visal-Shah S, Hemmingsen SM, Erlandson M, Braun L, Alting-Mees M, Khachatourians GG, O'grady M, Hegedus DD.

Insect Biochem Mol Biol. 2004 Oct;34(10):1101-15.

PMID:
15475304
28.

cpnDB: a chaperonin sequence database.

Hill JE, Penny SL, Crowell KG, Goh SH, Hemmingsen SM.

Genome Res. 2004 Aug;14(8):1669-75.

29.

Construction and characterization of a novel recombinant single-chain variable fragment antibody against White Spot Syndrome Virus from shrimp.

Dai H, Gao H, Zhao X, Dai L, Zhang X, Xiao N, Zhao R, Hemmingsen SM.

J Immunol Methods. 2003 Aug;279(1-2):267-75.

PMID:
12969566
30.

Enhancing Escherichia coli electrotransformation competency by invoking physiological adaptations to stress and modifying membrane integrity.

Shi X, Karkut T, Alting-Mees M, Chamankhah M, Hemmingsen SM, Hegedus DD.

Anal Biochem. 2003 Sep 1;320(1):152-5. No abstract available.

PMID:
12895481
31.

Optimal conditions for the expression of a single-chain antibody (scFv) gene in Pichia pastoris.

Shi X, Karkut T, Chamankhah M, Alting-Mees M, Hemmingsen SM, Hegedus D.

Protein Expr Purif. 2003 Apr;28(2):321-30.

PMID:
12699697
32.

Mamestra configurata serpin-1 homologues: cloning, localization and developmental regulation.

Chamankhah M, Braun L, Visal-Shah S, O'Grady M, Baldwin D, Shi X, Hemmingsen SM, Alting-Mees M, Hegedus DD.

Insect Biochem Mol Biol. 2003 Mar;33(3):355-69.

PMID:
12609520
33.

Structural and functional conservation of error-free DNA postreplication repair in Schizosaccharomyces pombe.

Brown M, Zhu Y, Hemmingsen SM, Xiao W.

DNA Repair (Amst). 2002 Nov 3;1(11):869-80.

PMID:
12531016
34.

Extensive profiling of a complex microbial community by high-throughput sequencing.

Hill JE, Seipp RP, Betts M, Hawkins L, Van Kessel AG, Crosby WL, Hemmingsen SM.

Appl Environ Microbiol. 2002 Jun;68(6):3055-66.

35.

5'-RACEing across a bridging oligonucleotide.

Shi X, Karkut T, Chahmanhkah M, Alting-Mees M, Hemmingsen SM, Hegedus D.

Biotechniques. 2002 Mar;32(3):480-2. No abstract available.

36.

Arabidopsis thaliana type I and II chaperonins.

Hill JE, Hemmingsen SM.

Cell Stress Chaperones. 2001 Jul;6(3):190-200.

37.

Streptococcus suis serotypes characterized by analysis of chaperonin 60 gene sequences.

Brousseau R, Hill JE, Préfontaine G, Goh SH, Harel J, Hemmingsen SM.

Appl Environ Microbiol. 2001 Oct;67(10):4828-33.

38.

Structure of Cdc4p, a contractile ring protein essential for cytokinesis in Schizosaccharomyces pombe.

Slupsky CM, Desautels M, Huebert T, Zhao R, Hemmingsen SM, McIntosh LP.

J Biol Chem. 2001 Feb 23;276(8):5943-51. Epub 2000 Nov 21.

39.

Cdc4p, a contractile ring protein essential for cytokinesis in Schizosaccharomyces pombe, interacts with a phosphatidylinositol 4-kinase.

Desautels M, Den Haese JP, Slupsky CM, McIntosh LP, Hemmingsen SM.

J Biol Chem. 2001 Feb 23;276(8):5932-42. Epub 2000 Nov 21.

40.

Identification of Enterococcus species and phenotypically similar Lactococcus and Vagococcus species by reverse checkerboard hybridization to chaperonin 60 gene sequences.

Goh SH, Facklam RR, Chang M, Hill JE, Tyrrell GJ, Burns EC, Chan D, He C, Rahim T, Shaw C, Hemmingsen SM.

J Clin Microbiol. 2000 Nov;38(11):3953-9.

41.

Characterization and immunolocalization of a cytosolic calcium-binding protein from Brassica napus and Arabidopsis pollen.

Rozwadowski K, Zhao R, Jackman L, Huebert T, Burkhart WE, Hemmingsen SM, Greenwood J, Rothstein SJ.

Plant Physiol. 1999 Jul;120(3):787-98.

42.

The cdr2(+) gene encodes a regulator of G2/M progression and cytokinesis in Schizosaccharomyces pombe.

Breeding CS, Hudson J, Balasubramanian MK, Hemmingsen SM, Young PG, Gould KL.

Mol Biol Cell. 1998 Dec;9(12):3399-415.

43.

Streptococcus iniae, a human and animal pathogen: specific identification by the chaperonin 60 gene identification method.

Goh SH, Driedger D, Gillett S, Low DE, Hemmingsen SM, Amos M, Chan D, Lovgren M, Willey BM, Shaw C, Smith JA.

J Clin Microbiol. 1998 Jul;36(7):2164-6.

44.

Identification of Staphylococcus species and subspecies by the chaperonin 60 gene identification method and reverse checkerboard hybridization.

Goh SH, Santucci Z, Kloos WE, Faltyn M, George CG, Driedger D, Hemmingsen SM.

J Clin Microbiol. 1997 Dec;35(12):3116-21.

45.

HSP60 gene sequences as universal targets for microbial species identification: studies with coagulase-negative staphylococci.

Goh SH, Potter S, Wood JO, Hemmingsen SM, Reynolds RP, Chow AW.

J Clin Microbiol. 1996 Apr;34(4):818-23.

46.

Schizosaccharomyces pombe cdc4+ gene encodes a novel EF-hand protein essential for cytokinesis.

McCollum D, Balasubramanian MK, Pelcher LE, Hemmingsen SM, Gould KL.

J Cell Biol. 1995 Aug;130(3):651-60.

47.

Brassica napus plastid and mitochondrial chaperonin-60 proteins contain multiple distinct polypeptides.

Cloney LP, Bekkaoui DR, Feist GL, Lane WS, Hemmingsen SM.

Plant Physiol. 1994 May;105(1):233-41.

48.

Co-expression of plastid chaperonin genes and a synthetic plant Rubisco operon in Escherichia coli.

Cloney LP, Bekkaoui DR, Hemmingsen SM.

Plant Mol Biol. 1993 Dec;23(6):1285-90.

PMID:
7904836
49.
50.

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