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Items: 47

1.

Cell wall dynamics and gene expression on soybean embryonic axes during germination.

Sangi S, Santos MLC, Alexandrino CR, Da Cunha M, Coelho FS, Ribeiro GP, Lenz D, Ballesteros H, Hemerly AS, Venâncio TM, Oliveira AEA, Grativol C.

Planta. 2019 Jul 4. doi: 10.1007/s00425-019-03231-1. [Epub ahead of print]

PMID:
31273443
2.

A Role for Epigenetic Regulation in the Adaptation and Stress Responses of Non-model Plants.

Thiebaut F, Hemerly AS, Ferreira PCG.

Front Plant Sci. 2019 Mar 1;10:246. doi: 10.3389/fpls.2019.00246. eCollection 2019. Review.

3.

A miniature inverted-repeat transposable element, AddIn-MITE, located inside a WD40 gene is conserved in Andropogoneae grasses.

Grativol C, Thiebaut F, Sangi S, Montessoro P, Santos WDS, Hemerly AS, Ferreira PCG.

PeerJ. 2019 Jan 11;7:e6080. doi: 10.7717/peerj.6080. eCollection 2019.

4.

Copaifera langsdorffii Novel Putative Long Non-Coding RNAs: Interspecies Conservation Analysis in Adaptive Response to Different Biomes.

Danilevicz MF, Moharana KC, Venancio TM, Franco LO, Cardoso SRS, Cardoso M, Thiebaut F, Hemerly AS, Prosdocimi F, Ferreira PCG.

Noncoding RNA. 2018 Oct 8;4(4). pii: E27. doi: 10.3390/ncrna4040027.

5.

Unraveling Interfaces between Energy Metabolism and Cell Cycle in Plants.

Siqueira JA, Hardoim P, Ferreira PCG, Nunes-Nesi A, Hemerly AS.

Trends Plant Sci. 2018 Aug;23(8):731-747. doi: 10.1016/j.tplants.2018.05.005. Epub 2018 Jun 19. Review.

PMID:
29934041
6.

Roles of Non-Coding RNA in Sugarcane-Microbe Interaction.

Thiebaut F, Rojas CA, Grativol C, Calixto EPDR, Motta MR, Ballesteros HGF, Peixoto B, de Lima BNS, Vieira LM, Walter ME, de Armas EM, Entenza JOP, Lifschitz S, Farinelli L, Hemerly AS, Ferreira PCG.

Noncoding RNA. 2017 Dec 20;3(4). pii: E25. doi: 10.3390/ncrna3040025.

7.

The plant cell cycle: Pre-Replication complex formation and controls.

Brasil JN, Costa CNM, Cabral LM, Ferreira PCG, Hemerly AS.

Genet Mol Biol. 2017;40(1 suppl 1):276-291. doi: 10.1590/1678-4685-GMB-2016-0118. Epub 2017 Mar 16.

8.

Sugarcane transcriptome analysis in response to infection caused by Acidovorax avenae subsp. avenae.

Santa Brigida AB, Rojas CA, Grativol C, de Armas EM, Entenza JO, Thiebaut F, Lima MF, Farrinelli L, Hemerly AS, Lifschitz S, Ferreira PC.

PLoS One. 2016 Dec 9;11(12):e0166473. doi: 10.1371/journal.pone.0166473. eCollection 2016.

9.

Computational identification and comparative analysis of miRNA precursors in three palm species.

da Silva AC, Grativol C, Thiebaut F, Hemerly AS, Ferreira PC.

Planta. 2016 May;243(5):1265-77. doi: 10.1007/s00425-016-2486-6. Epub 2016 Feb 26.

PMID:
26919984
10.

Nice to meet you: genetic, epigenetic and metabolic controls of plant perception of beneficial associative and endophytic diazotrophic bacteria in non-leguminous plants.

Carvalho TL, Ballesteros HG, Thiebaut F, Ferreira PC, Hemerly AS.

Plant Mol Biol. 2016 Apr;90(6):561-74. doi: 10.1007/s11103-016-0435-1. Epub 2016 Jan 28. Review.

PMID:
26821805
11.

AIP1 is a novel Agenet/Tudor domain protein from Arabidopsis that interacts with regulators of DNA replication, transcription and chromatin remodeling.

Brasil JN, Cabral LM, Eloy NB, Primo LM, Barroso-Neto IL, Grangeiro LP, Gonzalez N, Inzé D, Ferreira PC, Hemerly AS.

BMC Plant Biol. 2015 Nov 4;15:270. doi: 10.1186/s12870-015-0641-z.

12.

Drought tolerance conferred to sugarcane by association with Gluconacetobacter diazotrophicus: a transcriptomic view of hormone pathways.

Vargas L, Santa Brígida AB, Mota Filho JP, de Carvalho TG, Rojas CA, Vaneechoutte D, Van Bel M, Farrinelli L, Ferreira PC, Vandepoele K, Hemerly AS.

PLoS One. 2014 Dec 9;9(12):e114744. doi: 10.1371/journal.pone.0114744. eCollection 2014.

13.

Genome-wide identification of microRNA and siRNA responsive to endophytic beneficial diazotrophic bacteria in maize.

Thiebaut F, Rojas CA, Grativol C, Motta MR, Vieira T, Regulski M, Martienssen RA, Farinelli L, Hemerly AS, Ferreira PC.

BMC Genomics. 2014 Sep 6;15:766. doi: 10.1186/1471-2164-15-766.

14.

Nitrogen signalling in plant interactions with associative and endophytic diazotrophic bacteria.

Carvalho TL, Balsemão-Pires E, Saraiva RM, Ferreira PC, Hemerly AS.

J Exp Bot. 2014 Oct;65(19):5631-42. doi: 10.1093/jxb/eru319. Epub 2014 Aug 11. Review.

PMID:
25114015
15.

Sugarcane genome sequencing by methylation filtration provides tools for genomic research in the genus Saccharum.

Grativol C, Regulski M, Bertalan M, McCombie WR, da Silva FR, Zerlotini Neto A, Vicentini R, Farinelli L, Hemerly AS, Martienssen RA, Ferreira PC.

Plant J. 2014 Jul;79(1):162-72. doi: 10.1111/tpj.12539. Epub 2014 Jun 17.

16.

Differential sRNA regulation in leaves and roots of sugarcane under water depletion.

Thiebaut F, Grativol C, Tanurdzic M, Carnavale-Bottino M, Vieira T, Motta MR, Rojas C, Vincentini R, Chabregas SM, Hemerly AS, Martienssen RA, Ferreira PC.

PLoS One. 2014 Apr 2;9(4):e93822. doi: 10.1371/journal.pone.0093822. eCollection 2014.

17.

Overexpression of the anaphase-promoting complex (APC) genes in Nicotiana tabacum promotes increasing biomass accumulation.

de Freitas Lima M, Eloy NB, Bottino MC, Hemerly AS, Ferreira PC.

Mol Biol Rep. 2013 Dec;40(12):7093-102. doi: 10.1007/s11033-013-2832-8. Epub 2013 Nov 1.

PMID:
24178345
18.

The structurally related auxin and melatonin tryptophan-derivatives and their roles in Arabidopsis thaliana and in the human malaria parasite Plasmodium falciparum.

Koyama FC, Carvalho TL, Alves E, da Silva HB, de Azevedo MF, Hemerly AS, Garcia CR.

J Eukaryot Microbiol. 2013 Nov-Dec;60(6):646-51. doi: 10.1111/jeu.12080. Epub 2013 Sep 16.

PMID:
24102716
19.

High-throughput sequencing of small RNA transcriptome reveals salt stress regulated microRNAs in sugarcane.

Carnavale Bottino M, Rosario S, Grativol C, Thiebaut F, Rojas CA, Farrineli L, Hemerly AS, Ferreira PC.

PLoS One. 2013;8(3):e59423. doi: 10.1371/journal.pone.0059423. Epub 2013 Mar 27.

20.

Computational identification and analysis of novel sugarcane microRNAs.

Thiebaut F, Grativol C, Carnavale-Bottino M, Rojas CA, Tanurdzic M, Farinelli L, Martienssen RA, Hemerly AS, Ferreira PC.

BMC Genomics. 2012 Jul 2;13:290. doi: 10.1186/1471-2164-13-290.

21.

DNA barcoding Bromeliaceae: achievements and pitfalls.

Maia VH, Mata CS, Franco LO, Cardoso MA, Cardoso SR, Hemerly AS, Ferreira PC.

PLoS One. 2012;7(1):e29877. doi: 10.1371/journal.pone.0029877. Epub 2012 Jan 5.

22.

Regulation of miR319 during cold stress in sugarcane.

Thiebaut F, Rojas CA, Almeida KL, Grativol C, Domiciano GC, Lamb CR, Engler Jde A, Hemerly AS, Ferreira PC.

Plant Cell Environ. 2012 Mar;35(3):502-12. doi: 10.1111/j.1365-3040.2011.02430.x. Epub 2011 Oct 24.

23.

Genetic and epigenetic regulation of stress responses in natural plant populations.

Grativol C, Hemerly AS, Ferreira PC.

Biochim Biophys Acta. 2012 Feb;1819(2):176-85. doi: 10.1016/j.bbagrm.2011.08.010. Epub 2011 Sep 2. Review.

PMID:
21914492
24.

The APC/C subunit 10 plays an essential role in cell proliferation during leaf development.

Eloy NB, de Freitas Lima M, Van Damme D, Vanhaeren H, Gonzalez N, De Milde L, Hemerly AS, Beemster GT, Inzé D, Ferreira PC.

Plant J. 2011 Oct;68(2):351-63. doi: 10.1111/j.1365-313X.2011.04691.x. Epub 2011 Aug 8.

25.

Quantitative proteomic analysis of the interaction between the endophytic plant-growth-promoting bacterium Gluconacetobacter diazotrophicus and sugarcane.

Lery LM, Hemerly AS, Nogueira EM, von Krüger WM, Bisch PM.

Mol Plant Microbe Interact. 2011 May;24(5):562-76. doi: 10.1094/MPMI-08-10-0178.

26.

High efficiency and reliability of inter-simple sequence repeats (ISSR) markers for evaluation of genetic diversity in Brazilian cultivated Jatropha curcas L. accessions.

Grativol C, da Fonseca Lira-Medeiros C, Hemerly AS, Ferreira PC.

Mol Biol Rep. 2011 Oct;38(7):4245-56. doi: 10.1007/s11033-010-0547-7. Epub 2010 Nov 27.

PMID:
21113672
27.

Genomic evolution and complexity of the Anaphase-promoting Complex (APC) in land plants.

Lima Mde F, Eloy NB, Pegoraro C, Sagit R, Rojas C, Bretz T, Vargas L, Elofsson A, de Oliveira AC, Hemerly AS, Ferreira PC.

BMC Plant Biol. 2010 Nov 18;10:254. doi: 10.1186/1471-2229-10-254.

28.

Genetically modified crops for biomass increase. Genes and strategies.

Rojas CA, Hemerly AS, Ferreira PC.

GM Crops. 2010 May-Jun;1(3):137-42. doi: 10.4161/gmcr.1.3.12615. Review.

PMID:
21865869
29.

Proteome of Gluconacetobacter diazotrophicus co-cultivated with sugarcane plantlets.

dos Santos MF, Muniz de Pádua VL, de Matos Nogueira E, Hemerly AS, Domont GB.

J Proteomics. 2010 Mar 10;73(5):917-31. doi: 10.1016/j.jprot.2009.12.005. Epub 2009 Dec 16.

PMID:
20026003
30.

Overexpression of the Arabidopsis anaphase promoting complex subunit CDC27a increases growth rate and organ size.

Rojas CA, Eloy NB, Lima Mde F, Rodrigues RL, Franco LO, Himanen K, Beemster GT, Hemerly AS, Ferreira PC.

Plant Mol Biol. 2009 Oct;71(3):307-18. doi: 10.1007/s11103-009-9525-7. Epub 2009 Jul 21.

PMID:
19629716
31.

Orc1 controls centriole and centrosome copy number in human cells.

Hemerly AS, Prasanth SG, Siddiqui K, Stillman B.

Science. 2009 Feb 6;323(5915):789-93. doi: 10.1126/science.1166745.

32.

ABAP1 is a novel plant Armadillo BTB protein involved in DNA replication and transcription.

Masuda HP, Cabral LM, De Veylder L, Tanurdzic M, de Almeida Engler J, Geelen D, Inzé D, Martienssen RA, Ferreira PC, Hemerly AS.

EMBO J. 2008 Oct 22;27(20):2746-56. doi: 10.1038/emboj.2008.191. Epub 2008 Sep 25.

33.

Validation of a Tn5 transposon mutagenesis system for Gluconacetobacter diazotrophicus through characterization of a flagellar mutant.

Rouws LF, Simões-Araújo JL, Hemerly AS, Baldani JI.

Arch Microbiol. 2008 Apr;189(4):397-405. Epub 2007 Dec 5. Erratum in: Arch Microbiol. 2008 Apr;189(4):427.

PMID:
18060666
34.

Signal transduction-related responses to phytohormones and environmental challenges in sugarcane.

Rocha FR, Papini-Terzi FS, Nishiyama MY Jr, Vêncio RZ, Vicentini R, Duarte RD, de Rosa VE Jr, Vinagre F, Barsalobres C, Medeiros AH, Rodrigues FA, Ulian EC, Zingaretti SM, Galbiatti JA, Almeida RS, Figueira AV, Hemerly AS, Silva-Filho MC, Menossi M, Souza GM.

BMC Genomics. 2007 Mar 13;8:71.

35.

Members of the ethylene signalling pathway are regulated in sugarcane during the association with nitrogen-fixing endophytic bacteria.

Cavalcante JJ, Vargas C, Nogueira EM, Vinagre F, Schwarcz K, Baldani JI, Ferreira PC, Hemerly AS.

J Exp Bot. 2007;58(3):673-86. Epub 2007 Jan 8.

PMID:
17210990
36.

Gluconacetobacter diazotrophicus Elicits a Sugarcane Defense Response Against a Pathogenic Bacteria Xanthomonas albilineans.

Arencibia AD, Vinagre F, Estevez Y, Bernal A, Perez J, Cavalcanti J, Santana I, Hemerly AS.

Plant Signal Behav. 2006 Sep;1(5):265-73.

37.

The Arabidopsis anaphase promoting complex (APC): regulation through subunit availability in plant tissues.

Eloy NB, Coppens F, Beemster GT, Hemerly AS, Ferreira PC.

Cell Cycle. 2006 Sep;5(17):1957-65. Epub 2006 Sep 1.

PMID:
16940752
38.

SHR5: a novel plant receptor kinase involved in plant-N2-fixing endophytic bacteria association.

Vinagre F, Vargas C, Schwarcz K, Cavalcante J, Nogueira EM, Baldani JI, Ferreira PC, Hemerly AS.

J Exp Bot. 2006;57(3):559-69. Epub 2006 Jan 5.

PMID:
16397001
39.

Genome based identification and analysis of the pre-replicative complex of Arabidopsis thaliana.

Masuda HP, Ramos GB, de Almeida-Engler J, Cabral LM, Coqueiro VM, Macrini CM, Ferreira PC, Hemerly AS.

FEBS Lett. 2004 Sep 10;574(1-3):192-202.

40.

Evaluation of monocot and eudicot divergence using the sugarcane transcriptome.

Vincentz M, Cara FA, Okura VK, da Silva FR, Pedrosa GL, Hemerly AS, Capella AN, Marins M, Ferreira PC, França SC, Grivet L, Vettore AL, Kemper EL, Burnquist WL, Targon ML, Siqueira WJ, Kuramae EE, Marino CL, Camargo LE, Carrer H, Coutinho LL, Furlan LR, Lemos MV, Nunes LR, Gomes SL, Santelli RV, Goldman MH, Bacci M Jr, Giglioti EA, Thiemann OH, Silva FH, Van Sluys MA, Nobrega FG, Arruda P, Menck CF.

Plant Physiol. 2004 Mar;134(3):951-9.

41.

DNA replication in plants: characterization of a cdc6 homologue from Arabidopsis thaliana.

Ramos GB, de Almeida Engler J, Ferreira PC, Hemerly AS.

J Exp Bot. 2001 Nov;52(364):2239-40.

PMID:
11604464
42.
43.

Developmental expression of the arabidopsis cyclin gene cyc1At.

Ferreira PC, Hemerly AS, Engler JD, van Montagu M, Engler G, Inzé D.

Plant Cell. 1994 Dec;6(12):1763-74.

44.

cdc2a expression in Arabidopsis is linked with competence for cell division.

Hemerly AS, Ferreira P, de Almeida Engler J, Van Montagu M, Engler G, Inzé D.

Plant Cell. 1993 Dec;5(12):1711-23.

46.

A cdc2 gene of Petunia hybrida is differentially expressed in leaves, protoplasts and during various cell cycle phases.

Bergounioux C, Perennes C, Hemerly AS, Qin LX, Sarda C, Inze D, Gadal P.

Plant Mol Biol. 1992 Dec;20(6):1121-30.

PMID:
1361156
47.

The Arabidopsis functional homolog of the p34cdc2 protein kinase.

Ferreira PC, Hemerly AS, Villarroel R, Van Montagu M, Inzé D.

Plant Cell. 1991 May;3(5):531-40.

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