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Items: 13

1.

Targeted Amplification and Sequencing of Ancient Environmental and Sedimentary DNA.

Nichols RV, Curd E, Heintzman PD, Shapiro B.

Methods Mol Biol. 2019;1963:149-161. doi: 10.1007/978-1-4939-9176-1_16.

PMID:
30875053
2.

Minimizing polymerase biases in metabarcoding.

Nichols RV, Vollmers C, Newsom LA, Wang Y, Heintzman PD, Leighton M, Green RE, Shapiro B.

Mol Ecol Resour. 2018 May 24. doi: 10.1111/1755-0998.12895. [Epub ahead of print]

PMID:
29797549
3.

Genomic Evidence of Widespread Admixture from Polar Bears into Brown Bears during the Last Ice Age.

Cahill JA, Heintzman PD, Harris K, Teasdale MD, Kapp J, Soares AER, Stirling I, Bradley D, Edwards CJ, Graim K, Kisleika AA, Malev AV, Monaghan N, Green RE, Shapiro B.

Mol Biol Evol. 2018 May 1;35(5):1120-1129. doi: 10.1093/molbev/msy018.

4.

A new genus of horse from Pleistocene North America.

Heintzman PD, Zazula GD, MacPhee R, Scott E, Cahill JA, McHorse BK, Kapp JD, Stiller M, Wooller MJ, Orlando L, Southon J, Froese DG, Shapiro B.

Elife. 2017 Nov 28;6. pii: e29944. doi: 10.7554/eLife.29944.

5.

Natural selection shaped the rise and fall of passenger pigeon genomic diversity.

Murray GGR, Soares AER, Novak BJ, Schaefer NK, Cahill JA, Baker AJ, Demboski JR, Doll A, Da Fonseca RR, Fulton TL, Gilbert MTP, Heintzman PD, Letts B, McIntosh G, O'Connell BL, Peck M, Pipes ML, Rice ES, Santos KM, Sohrweide AG, Vohr SH, Corbett-Detig RB, Green RE, Shapiro B.

Science. 2017 Nov 17;358(6365):951-954. doi: 10.1126/science.aao0960.

PMID:
29146814
6.

Fossil and genomic evidence constrains the timing of bison arrival in North America.

Froese D, Stiller M, Heintzman PD, Reyes AV, Zazula GD, Soares AE, Meyer M, Hall E, Jensen BJ, Arnold LJ, MacPhee RD, Shapiro B.

Proc Natl Acad Sci U S A. 2017 Mar 28;114(13):3457-3462. doi: 10.1073/pnas.1620754114. Epub 2017 Mar 13.

7.

Complex Admixture Preceded and Followed the Extinction of Wisent in the Wild.

Wecek K, Hartmann S, Paijmans JL, Taron U, Xenikoudakis G, Cahill JA, Heintzman PD, Shapiro B, Baryshnikov G, Bunevich AN, Crees JJ, Dobosz R, Manaserian N, Okarma H, Tokarska M, Turvey ST, Wójcik JM, Zyla W, Szymura JM, Hofreiter M, Barlow A.

Mol Biol Evol. 2017 Mar 1;34(3):598-612. doi: 10.1093/molbev/msw254.

8.

Timing and causes of mid-Holocene mammoth extinction on St. Paul Island, Alaska.

Graham RW, Belmecheri S, Choy K, Culleton BJ, Davies LJ, Froese D, Heintzman PD, Hritz C, Kapp JD, Newsom LA, Rawcliffe R, Saulnier-Talbot É, Shapiro B, Wang Y, Williams JW, Wooller MJ.

Proc Natl Acad Sci U S A. 2016 Aug 16;113(33):9310-4. doi: 10.1073/pnas.1604903113. Epub 2016 Aug 1.

9.

Bison phylogeography constrains dispersal and viability of the Ice Free Corridor in western Canada.

Heintzman PD, Froese D, Ives JW, Soares AE, Zazula GD, Letts B, Andrews TD, Driver JC, Hall E, Hare PG, Jass CN, MacKay G, Southon JR, Stiller M, Woywitka R, Suchard MA, Shapiro B.

Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):8057-63. doi: 10.1073/pnas.1601077113. Epub 2016 Jun 6.

10.

Genomic Data from Extinct North American Camelops Revise Camel Evolutionary History.

Heintzman PD, Zazula GD, Cahill JA, Reyes AV, MacPhee RD, Shapiro B.

Mol Biol Evol. 2015 Sep;32(9):2433-40. doi: 10.1093/molbev/msv128. Epub 2015 Jun 2.

11.

Preservation of viral genomes in 700-y-old caribou feces from a subarctic ice patch.

Ng TF, Chen LF, Zhou Y, Shapiro B, Stiller M, Heintzman PD, Varsani A, Kondov NO, Wong W, Deng X, Andrews TD, Moorman BJ, Meulendyk T, MacKay G, Gilbertson RL, Delwart E.

Proc Natl Acad Sci U S A. 2014 Nov 25;111(47):16842-7. doi: 10.1073/pnas.1410429111. Epub 2014 Oct 27.

12.

The genome of a Late Pleistocene human from a Clovis burial site in western Montana.

Rasmussen M, Anzick SL, Waters MR, Skoglund P, DeGiorgio M, Stafford TW Jr, Rasmussen S, Moltke I, Albrechtsen A, Doyle SM, Poznik GD, Gudmundsdottir V, Yadav R, Malaspinas AS, White SS 5th, Allentoft ME, Cornejo OE, Tambets K, Eriksson A, Heintzman PD, Karmin M, Korneliussen TS, Meltzer DJ, Pierre TL, Stenderup J, Saag L, Warmuth VM, Lopes MC, Malhi RS, Brunak S, Sicheritz-Ponten T, Barnes I, Collins M, Orlando L, Balloux F, Manica A, Gupta R, Metspalu M, Bustamante CD, Jakobsson M, Nielsen R, Willerslev E.

Nature. 2014 Feb 13;506(7487):225-9. doi: 10.1038/nature13025.

13.

Characterizing DNA preservation in degraded specimens of Amara alpina (Carabidae: Coleoptera).

Heintzman PD, Elias SA, Moore K, Paszkiewicz K, Barnes I.

Mol Ecol Resour. 2014 May;14(3):606-15. doi: 10.1111/1755-0998.12205. Epub 2013 Dec 30.

PMID:
24266987

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