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[Assessment of decision-making competence; article for educational and training purposes].

Hein IM, Blankman C, Vellinga A, Hondius AJK.

Ned Tijdschr Geneeskd. 2019 Aug 15;163. pii: D3731. Dutch.


Chitin-Binding Protein of Verticillium nonalfalfae Disguises Fungus from Plant Chitinases and Suppresses Chitin-Triggered Host Immunity.

Volk H, Marton K, Flajšman M, Radišek S, Tian H, Hein I, Podlipnik Č, Thomma BPHJ, Košmelj K, Javornik B, Berne S.

Mol Plant Microbe Interact. 2019 Aug 14:MPMI03190079R. doi: 10.1094/MPMI-03-19-0079-R. [Epub ahead of print]


Mapping the H2 resistance effective against Globodera pallida pathotype Pa1 in tetraploid potato.

Strachan SM, Armstrong MR, Kaur A, Wright KM, Lim TY, Baker K, Jones J, Bryan G, Blok V, Hein I.

Theor Appl Genet. 2019 Apr;132(4):1283-1294. doi: 10.1007/s00122-019-03278-4. Epub 2019 Jan 21.


A critical comparison of technologies for a plant genome sequencing project.

Paajanen P, Kettleborough G, López-Girona E, Giolai M, Heavens D, Baker D, Lister A, Cugliandolo F, Wilde G, Hein I, Macaulay I, Bryan GJ, Clark MD.

Gigascience. 2019 Mar 1;8(3). pii: giy163. doi: 10.1093/gigascience/giy163.


Phytophthora infestans RXLR effectors act in concert at diverse subcellular locations to enhance host colonization.

Wang S, McLellan H, Bukharova T, He Q, Murphy F, Shi J, Sun S, van Weymers P, Ren Y, Thilliez G, Wang H, Chen X, Engelhardt S, Vleeshouwers V, Gilroy EM, Whisson SC, Hein I, Wang X, Tian Z, Birch PRJ, Boevink PC.

J Exp Bot. 2019 Jan 1;70(1):343-356. doi: 10.1093/jxb/ery360.


Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field.

Jouet A, Saunders DGO, McMullan M, Ward B, Furzer O, Jupe F, Cevik V, Hein I, Thilliez GJA, Holub E, van Oosterhout C, Jones JDG.

New Phytol. 2019 Feb;221(3):1529-1543. doi: 10.1111/nph.15417. Epub 2018 Oct 5.


Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes.

Thilliez GJA, Armstrong MR, Lim TY, Baker K, Jouet A, Ward B, van Oosterhout C, Jones JDG, Huitema E, Birch PRJ, Hein I.

New Phytol. 2019 Feb;221(3):1634-1648. doi: 10.1111/nph.15441. Epub 2018 Oct 5.


BLASTmap: A Shiny-Based Application to Visualize BLAST Results as Interactive Heat Maps and a Tool to Design Gene-Specific Baits for Bespoke Target Enrichment Sequencing.

Baker K, Stephen G, Strachan S, Armstrong M, Hein I.

Methods Mol Biol. 2018;1848:199-206. doi: 10.1007/978-1-4939-8724-5_14.


Tracking disease resistance deployment in potato breeding by enrichment sequencing.

Armstrong MR, Vossen J, Lim TY, Hutten RCB, Xu J, Strachan SM, Harrower B, Champouret N, Gilroy EM, Hein I.

Plant Biotechnol J. 2019 Feb;17(2):540-549. doi: 10.1111/pbi.12997. Epub 2018 Sep 19.


Plant pathogen effector utilizes host susceptibility factor NRL1 to degrade the immune regulator SWAP70.

He Q, Naqvi S, McLellan H, Boevink PC, Champouret N, Hein I, Birch PRJ.

Proc Natl Acad Sci U S A. 2018 Aug 14;115(33):E7834-E7843. doi: 10.1073/pnas.1808585115. Epub 2018 Jul 26.


Identification and rapid mapping of a gene conferring broad-spectrum late blight resistance in the diploid potato species Solanum verrucosum through DNA capture technologies.

Chen X, Lewandowska D, Armstrong MR, Baker K, Lim TY, Bayer M, Harrower B, McLean K, Jupe F, Witek K, Lees AK, Jones JD, Bryan GJ, Hein I.

Theor Appl Genet. 2018 Jun;131(6):1287-1297. doi: 10.1007/s00122-018-3078-6. Epub 2018 Mar 20.


Using Children's Voice to Optimize Pediatric Participation in Medical Decision Making.

Grootens-Wiegers P, Hein I, Staphorst M.

Am J Bioeth. 2018 Mar;18(3):14-16. doi: 10.1080/15265161.2017.1418928. No abstract available.


Potato late blight field resistance from QTL dPI09c is conferred by the NB-LRR gene R8.

Jiang R, Li J, Tian Z, Du J, Armstrong M, Baker K, Tze-Yin Lim J, Vossen JH, He H, Portal L, Zhou J, Bonierbale M, Hein I, Lindqvist-Kreuze H, Xie C.

J Exp Bot. 2018 Mar 24;69(7):1545-1555. doi: 10.1093/jxb/ery021.


Psychiatric screening and interventions for minor refugees in Europe: an overview of approaches and tools.

Horlings A, Hein I.

Eur J Pediatr. 2018 Feb;177(2):163-169. doi: 10.1007/s00431-017-3027-4. Epub 2017 Nov 10. Review.


Medical decision-making in children and adolescents: developmental and neuroscientific aspects.

Grootens-Wiegers P, Hein IM, van den Broek JM, de Vries MC.

BMC Pediatr. 2017 May 8;17(1):120. doi: 10.1186/s12887-017-0869-x. Review.


Targeted capture and sequencing of gene-sized DNA molecules.

Giolai M, Paajanen P, Verweij W, Percival-Alwyn L, Baker D, Witek K, Jupe F, Bryan G, Hein I, Jones JD, Clark MD.

Biotechniques. 2016 Dec 1;61(6):315-322.


Utilizing "Omic" Technologies to Identify and Prioritize Novel Sources of Resistance to the Oomycete Pathogen Phytophthora infestans in Potato Germplasm Collections.

Van Weymers PS, Baker K, Chen X, Harrower B, Cooke DE, Gilroy EM, Birch PR, Thilliez GJ, Lees AK, Lynott JS, Armstrong MR, McKenzie G, Bryan GJ, Hein I.

Front Plant Sci. 2016 May 27;7:672. doi: 10.3389/fpls.2016.00672. eCollection 2016.


Evidence of metabolically active but non-culturable Listeria monocytogenes in long-term growth at 10 °C.

Gurresch A, Gerner W, Pin C, Wagner M, Hein I.

Res Microbiol. 2016 May;167(4):334-343. doi: 10.1016/j.resmic.2016.01.003. Epub 2016 Mar 31.


A Phytophthora infestans RXLR effector targets plant PP1c isoforms that promote late blight disease.

Boevink PC, Wang X, McLellan H, He Q, Naqvi S, Armstrong MR, Zhang W, Hein I, Gilroy EM, Tian Z, Birch PRJ.

Nat Commun. 2016 Jan 29;7:10311. doi: 10.1038/ncomms10311.


Informed consent instead of assent is appropriate in children from the age of twelve: Policy implications of new findings on children's competence to consent to clinical research.

Hein IM, De Vries MC, Troost PW, Meynen G, Van Goudoever JB, Lindauer RJ.

BMC Med Ethics. 2015 Nov 9;16(1):76. doi: 10.1186/s12910-015-0067-z. Review.


Key factors in children's competence to consent to clinical research.

Hein IM, Troost PW, Lindeboom R, Benninga MA, Zwaan CM, van Goudoever JB, Lindauer RJ.

BMC Med Ethics. 2015 Oct 24;16(1):74. doi: 10.1186/s12910-015-0066-0.


A disease resistance locus on potato and tomato chromosome 4 exhibits a conserved multipartite structure displaying different rates of evolution in different lineages.

Destefanis M, Nagy I, Rigney B, Bryan GJ, McLean K, Hein I, Griffin D, Milbourne D.

BMC Plant Biol. 2015 Oct 24;15:255. doi: 10.1186/s12870-015-0645-8.


A transcriptional reference map of defence hormone responses in potato.

Wiesel L, Davis JL, Milne L, Redondo Fernandez V, Herold MB, Middlefell Williams J, Morris J, Hedley PE, Harrower B, Newton AC, Birch PRJ, Gilroy EM, Hein I.

Sci Rep. 2015 Oct 19;5:15229. doi: 10.1038/srep15229.


Feasibility of an Assessment Tool for Children's Competence to Consent to Predictive Genetic Testing: a Pilot Study.

Hein IM, Troost PW, Lindeboom R, Christiaans I, Grisso T, van Goudoever JB, Lindauer RJ.

J Genet Couns. 2015 Dec;24(6):971-7. doi: 10.1007/s10897-015-9835-7. Epub 2015 Apr 26.


Why do children decide not to participate in clinical research: a quantitative and qualitative study.

Hein IM, Troost PW, de Vries MC, Knibbe CA, van Goudoever JB, Lindauer RJ.

Pediatr Res. 2015 Jul;78(1):103-8. doi: 10.1038/pr.2015.74. Epub 2015 Apr 9.


Why is it hard to make progress in assessing children's decision-making competence?

Hein IM, Troost PW, Broersma A, de Vries MC, Daams JG, Lindauer RJ.

BMC Med Ethics. 2015 Jan 10;16:1. doi: 10.1186/1472-6939-16-1.


Molecular effects of resistance elicitors from biological origin and their potential for crop protection.

Wiesel L, Newton AC, Elliott I, Booty D, Gilroy EM, Birch PR, Hein I.

Front Plant Sci. 2014 Nov 21;5:655. doi: 10.3389/fpls.2014.00655. eCollection 2014. Review.


Flamingo, a seven-pass transmembrane cadherin, cooperates with Netrin/Frazzled in Drosophila midline guidance.

Organisti C, Hein I, Grunwald Kadow IC, Suzuki T.

Genes Cells. 2015 Jan;20(1):50-67. doi: 10.1111/gtc.12202. Epub 2014 Nov 30.


Detection of the virulent form of AVR3a from Phytophthora infestans following artificial evolution of potato resistance gene R3a.

Chapman S, Stevens LJ, Boevink PC, Engelhardt S, Alexander CJ, Harrower B, Champouret N, McGeachy K, Van Weymers PS, Chen X, Birch PR, Hein I.

PLoS One. 2014 Oct 23;9(10):e110158. doi: 10.1371/journal.pone.0110158. eCollection 2014.


Accuracy of the MacArthur competence assessment tool for clinical research (MacCAT-CR) for measuring children's competence to consent to clinical research.

Hein IM, Troost PW, Lindeboom R, Benninga MA, Zwaan CM, van Goudoever JB, Lindauer RJ.

JAMA Pediatr. 2014 Dec;168(12):1147-53. doi: 10.1001/jamapediatrics.2014.1694.


Enumeration of clostridia in goat milk using an optimized membrane filtration technique.

Reindl A, Dzieciol M, Hein I, Wagner M, Zangerl P.

J Dairy Sci. 2014 Oct;97(10):6036-45. doi: 10.3168/jds.2014-8218. Epub 2014 Aug 14.


Genomic DNA library preparation for resistance gene enrichment and sequencing (RenSeq) in plants.

Jupe F, Chen X, Verweij W, Witek K, Jones JD, Hein I.

Methods Mol Biol. 2014;1127:291-303. doi: 10.1007/978-1-62703-986-4_22.


Resistance gene enrichment sequencing (RenSeq) enables reannotation of the NB-LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations.

Jupe F, Witek K, Verweij W, Sliwka J, Pritchard L, Etherington GJ, Maclean D, Cock PJ, Leggett RM, Bryan GJ, Cardle L, Hein I, Jones JD.

Plant J. 2013 Nov;76(3):530-44. doi: 10.1111/tpj.12307. Epub 2013 Oct 8.


Gogo receptor contributes to retinotopic map formation and prevents R1-6 photoreceptor axon bundling.

Hein I, Suzuki T, Grunwald Kadow IC.

PLoS One. 2013 Jun 24;8(6):e66868. doi: 10.1371/journal.pone.0066868. Print 2013.


Essential role of the mushroom body in context-dependent CO₂ avoidance in Drosophila.

Bräcker LB, Siju KP, Varela N, Aso Y, Zhang M, Hein I, Vasconcelos ML, Grunwald Kadow IC.

Curr Biol. 2013 Jul 8;23(13):1228-34. doi: 10.1016/j.cub.2013.05.029. Epub 2013 Jun 13.


Relocalization of late blight resistance protein R3a to endosomal compartments is associated with effector recognition and required for the immune response.

Engelhardt S, Boevink PC, Armstrong MR, Ramos MB, Hein I, Birch PR.

Plant Cell. 2012 Dec;24(12):5142-58. doi: 10.1105/tpc.112.104992. Epub 2012 Dec 14.


Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen.

Cooke DE, Cano LM, Raffaele S, Bain RA, Cooke LR, Etherington GJ, Deahl KL, Farrer RA, Gilroy EM, Goss EM, Grünwald NJ, Hein I, MacLean D, McNicol JW, Randall E, Oliva RF, Pel MA, Shaw DS, Squires JN, Taylor MC, Vleeshouwers VG, Birch PR, Lees AK, Kamoun S.

PLoS Pathog. 2012;8(10):e1002940. doi: 10.1371/journal.ppat.1002940. Epub 2012 Oct 4.


Assessing children's competence to consent in research by a standardized tool: a validity study.

Hein IM, Troost PW, Lindeboom R, de Vries MC, Zwaan CM, Lindauer RJ.

BMC Pediatr. 2012 Sep 25;12:156. doi: 10.1186/1471-2431-12-156.


Host protein BSL1 associates with Phytophthora infestans RXLR effector AVR2 and the Solanum demissum Immune receptor R2 to mediate disease resistance.

Saunders DG, Breen S, Win J, Schornack S, Hein I, Bozkurt TO, Champouret N, Vleeshouwers VG, Birch PR, Gilroy EM, Kamoun S.

Plant Cell. 2012 Aug;24(8):3420-34. Epub 2012 Aug 10.


Identification and localisation of the NB-LRR gene family within the potato genome.

Jupe F, Pritchard L, Etherington GJ, Mackenzie K, Cock PJ, Wright F, Sharma SK, Bolser D, Bryan GJ, Jones JD, Hein I.

BMC Genomics. 2012 Feb 15;13:75. doi: 10.1186/1471-2164-13-75.


CmeR-dependent gene Cj0561c is induced more effectively by bile salts than the CmeABC efflux pump in both human and poultry Campylobacter jejuni strains.

Dzieciol M, Wagner M, Hein I.

Res Microbiol. 2011 Dec;162(10):991-8. doi: 10.1016/j.resmic.2011.08.001. Epub 2011 Aug 31.


ADS1 encodes a MATE-transporter that negatively regulates plant disease resistance.

Sun X, Gilroy EM, Chini A, Nurmberg PL, Hein I, Lacomme C, Birch PR, Hussain A, Yun BW, Loake GJ.

New Phytol. 2011 Oct;192(2):471-82. doi: 10.1111/j.1469-8137.2011.03820.x. Epub 2011 Jul 15.


Presence/absence, differential expression and sequence polymorphisms between PiAVR2 and PiAVR2-like in Phytophthora infestans determine virulence on R2 plants.

Gilroy EM, Breen S, Whisson SC, Squires J, Hein I, Kaczmarek M, Turnbull D, Boevink PC, Lokossou A, Cano LM, Morales J, Avrova AO, Pritchard L, Randall E, Lees A, Govers F, van West P, Kamoun S, Vleeshouwers VG, Cooke DE, Birch PR.

New Phytol. 2011 Aug;191(3):763-76. doi: 10.1111/j.1469-8137.2011.03736.x. Epub 2011 May 3.


CMPG1-dependent cell death follows perception of diverse pathogen elicitors at the host plasma membrane and is suppressed by Phytophthora infestans RXLR effector AVR3a.

Gilroy EM, Taylor RM, Hein I, Boevink P, Sadanandom A, Birch PR.

New Phytol. 2011 May;190(3):653-66. doi: 10.1111/j.1469-8137.2011.03643.x. Epub 2011 Feb 23.


Stress survival islet 1 (SSI-1) survey in Listeria monocytogenes reveals an insert common to listeria innocua in sequence type 121 L. monocytogenes strains.

Hein I, Klinger S, Dooms M, Flekna G, Stessl B, Leclercq A, Hill C, Allerberger F, Wagner M.

Appl Environ Microbiol. 2011 Mar;77(6):2169-73. doi: 10.1128/AEM.02159-10. Epub 2011 Jan 14.


Advanced sample preparation for the molecular quantification of Staphylococcus aureus in artificially and naturally contaminated milk.

Aprodu I, Walcher G, Schelin J, Hein I, Norling B, Rådström P, Nicolau A, Wagner M.

Int J Food Microbiol. 2011 Mar 1;145 Suppl 1:S61-5. doi: 10.1016/j.ijfoodmicro.2010.09.018. Epub 2010 Sep 25.


[Olanzapine in the treatment of adolescents with anorexia nervosa].

Hein IM, Huyser C.

Tijdschr Psychiatr. 2010;52(6):417-21. Review. Dutch.

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