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Items: 13

1.

RNA Interference (RNAi) Screening in Drosophila.

Heigwer F, Port F, Boutros M.

Genetics. 2018 Mar;208(3):853-874. doi: 10.1534/genetics.117.300077.

2.

Toward an integrated map of genetic interactions in cancer cells.

Rauscher B, Heigwer F, Henkel L, Hielscher T, Voloshanenko O, Boutros M.

Mol Syst Biol. 2018 Feb 21;14(2):e7656. doi: 10.15252/msb.20177656.

3.

Data-analysis strategies for image-based cell profiling.

Caicedo JC, Cooper S, Heigwer F, Warchal S, Qiu P, Molnar C, Vasilevich AS, Barry JD, Bansal HS, Kraus O, Wawer M, Paavolainen L, Herrmann MD, Rohban M, Hung J, Hennig H, Concannon J, Smith I, Clemons PA, Singh S, Rees P, Horvath P, Linington RG, Carpenter AE.

Nat Methods. 2017 Aug 31;14(9):849-863. doi: 10.1038/nmeth.4397.

PMID:
28858338
4.

HTSvis: a web app for exploratory data analysis and visualization of arrayed high-throughput screens.

Scheeder C, Heigwer F, Boutros M.

Bioinformatics. 2017 Sep 15;33(18):2960-2962. doi: 10.1093/bioinformatics/btx319.

5.

GenomeCRISPR - a database for high-throughput CRISPR/Cas9 screens.

Rauscher B, Heigwer F, Breinig M, Winter J, Boutros M.

Nucleic Acids Res. 2017 Jan 4;45(D1):D679-D686. doi: 10.1093/nar/gkw997. Epub 2016 Oct 26.

6.

CRISPR library designer (CLD): software for multispecies design of single guide RNA libraries.

Heigwer F, Zhan T, Breinig M, Winter J, Brügemann D, Leible S, Boutros M.

Genome Biol. 2016 Mar 24;17:55. doi: 10.1186/s13059-016-0915-2.

7.

Microscopy-Based High-Content Screening.

Boutros M, Heigwer F, Laufer C.

Cell. 2015 Dec 3;163(6):1314-25. doi: 10.1016/j.cell.2015.11.007. Review.

8.

caRpools: an R package for exploratory data analysis and documentation of pooled CRISPR/Cas9 screens.

Winter J, Breinig M, Heigwer F, Brügemann D, Leible S, Pelz O, Zhan T, Boutros M.

Bioinformatics. 2016 Feb 15;32(4):632-4. doi: 10.1093/bioinformatics/btv617. Epub 2015 Oct 27.

PMID:
26508755
9.

E-CRISP: fast CRISPR target site identification.

Heigwer F, Kerr G, Boutros M.

Nat Methods. 2014 Feb;11(2):122-3. doi: 10.1038/nmeth.2812. No abstract available.

PMID:
24481216
10.

E-TALEN: a web tool to design TALENs for genome engineering.

Heigwer F, Kerr G, Walther N, Glaeser K, Pelz O, Breinig M, Boutros M.

Nucleic Acids Res. 2013 Nov;41(20):e190. doi: 10.1093/nar/gkt789. Epub 2013 Sep 3.

11.

Acetic acid treatment in S. cerevisiae creates significant energy deficiency and nutrient starvation that is dependent on the activity of the mitochondrial transcriptional complex Hap2-3-4-5.

Kitanovic A, Bonowski F, Heigwer F, Ruoff P, Kitanovic I, Ungewiss C, Wölfl S.

Front Oncol. 2012 Sep 21;2:118. doi: 10.3389/fonc.2012.00118. eCollection 2012.

12.

KOMA: ELISA-microarray calibration and data analysis based on kinetic signal amplification.

Holenya P, Heigwer F, Wölfl S.

J Immunol Methods. 2012 Jun 29;380(1-2):10-5. doi: 10.1016/j.jim.2012.03.006. Epub 2012 Mar 30.

PMID:
22484508
13.

Microarray-based kinetic colorimetric detection for quantitative multiplex protein phosphorylation analysis.

Holenya P, Kitanovic I, Heigwer F, Wölfl S.

Proteomics. 2011 May;11(10):2129-33. doi: 10.1002/pmic.201000690. Epub 2011 Apr 18.

PMID:
21500346

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