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Items: 19

1.

A genome alignment of 120 mammals highlights ultraconserved element variability and placenta-associated enhancers.

Hecker N, Hiller M.

Gigascience. 2020 Jan 1;9(1). pii: giz159. doi: 10.1093/gigascience/giz159.

2.

Author Correction: A genomics approach reveals insights into the importance of gene losses for mammalian adaptations.

Sharma V, Hecker N, Roscito JG, Foerster L, Langer BE, Hiller M.

Nat Commun. 2019 Dec 10;10(1):5707. doi: 10.1038/s41467-019-13828-5.

3.

RepeatFiller newly identifies megabases of aligning repetitive sequences and improves annotations of conserved non-exonic elements.

Osipova E, Hecker N, Hiller M.

Gigascience. 2019 Nov 1;8(11). pii: giz132. doi: 10.1093/gigascience/giz132.

4.

Genes lost during the transition from land to water in cetaceans highlight genomic changes associated with aquatic adaptations.

Huelsmann M, Hecker N, Springer MS, Gatesy J, Sharma V, Hiller M.

Sci Adv. 2019 Sep 25;5(9):eaaw6671. doi: 10.1126/sciadv.aaw6671. eCollection 2019 Sep.

5.

Convergent vomeronasal system reduction in mammals coincides with convergent losses of calcium signalling and odorant-degrading genes.

Hecker N, Lächele U, Stuckas H, Giere P, Hiller M.

Mol Ecol. 2019 Aug;28(16):3656-3668. doi: 10.1111/mec.15180. Epub 2019 Aug 2.

PMID:
31332871
6.

Convergent gene losses illuminate metabolic and physiological changes in herbivores and carnivores.

Hecker N, Sharma V, Hiller M.

Proc Natl Acad Sci U S A. 2019 Feb 19;116(8):3036-3041. doi: 10.1073/pnas.1818504116. Epub 2019 Feb 4.

7.

Odontogenic ameloblast-associated (ODAM) is inactivated in toothless/enamelless placental mammals and toothed whales.

Springer MS, Emerling CA, Gatesy J, Randall J, Collin MA, Hecker N, Hiller M, Delsuc F.

BMC Evol Biol. 2019 Jan 23;19(1):31. doi: 10.1186/s12862-019-1359-6.

8.

The German emergency and disaster medicine and management system-history and present.

Hecker N, Domres BD.

Chin J Traumatol. 2018 Apr;21(2):64-72. doi: 10.1016/j.cjtee.2017.09.003. Epub 2018 Jan 31. Review.

9.

A genomics approach reveals insights into the importance of gene losses for mammalian adaptations.

Sharma V, Hecker N, Roscito JG, Foerster L, Langer BE, Hiller M.

Nat Commun. 2018 Mar 23;9(1):1215. doi: 10.1038/s41467-018-03667-1. Erratum in: Nat Commun. 2019 Dec 10;10(1):5707.

10.

Transition to an Aquatic Habitat Permitted the Repeated Loss of the Pleiotropic KLK8 Gene in Mammals.

Hecker N, Sharma V, Hiller M.

Genome Biol Evol. 2017 Nov 1;9(11):3179-3188. doi: 10.1093/gbe/evx239.

11.

Translational co-regulation of a ligand and inhibitor by a conserved RNA element.

Zaucker A, Nagorska A, Kumari P, Hecker N, Wang Y, Huang S, Cooper L, Sivashanmugam L, VijayKumar S, Brosens J, Gorodkin J, Sampath K.

Nucleic Acids Res. 2018 Jan 9;46(1):104-119. doi: 10.1093/nar/gkx938.

12.

Associating transcription factors and conserved RNA structures with gene regulation in the human brain.

Hecker N, Seemann SE, Silahtaroglu A, Ruzzo WL, Gorodkin J.

Sci Rep. 2017 Jul 18;7(1):5776. doi: 10.1038/s41598-017-06200-4.

13.

Association of CA27.29 and Circulating Tumor Cells Before and at Different Times After Adjuvant Chemotherapy in Patients with Early-stage Breast Cancer - The SUCCESS Trial.

Hepp P, Andergassen U, Jäger B, Trapp E, Alunni-Fabbroni M, Friedl TW, Hecker N, Lorenz R, Fasching P, Schneeweiss A, Fehm T, Janni W, Rack B.

Anticancer Res. 2016 Sep;36(9):4771-6.

PMID:
27630326
14.

Optimizing RNA structures by sequence extensions using RNAcop.

Hecker N, Christensen-Dalsgaard M, Seemann SE, Havgaard JH, Stadler PF, Hofacker IL, Nielsen H, Gorodkin J.

Nucleic Acids Res. 2015 Sep 30;43(17):8135-45. doi: 10.1093/nar/gkv813. Epub 2015 Aug 17.

15.

RNA secondary structure diagrams for very large molecules: RNAfdl.

Hecker N, Wiegels T, Torda AE.

Bioinformatics. 2013 Nov 15;29(22):2941-2. doi: 10.1093/bioinformatics/btt496. Epub 2013 Aug 23.

PMID:
23975766
16.

A new algorithm for integrated analysis of miRNA-mRNA interactions based on individual classification reveals insights into bladder cancer.

Hecker N, Stephan C, Mollenkopf HJ, Jung K, Preissner R, Meyer HA.

PLoS One. 2013 May 24;8(5):e64543. doi: 10.1371/journal.pone.0064543. Print 2013.

17.

SuperTarget goes quantitative: update on drug-target interactions.

Hecker N, Ahmed J, von Eichborn J, Dunkel M, Macha K, Eckert A, Gilson MK, Bourne PE, Preissner R.

Nucleic Acids Res. 2012 Jan;40(Database issue):D1113-7. doi: 10.1093/nar/gkr912. Epub 2011 Nov 8.

18.

European survey on decontamination in mass casualty incidents.

Domres BD, Rashid A, Grundgeiger J, Gromer S, Kees T, Hecker N, Peter H.

Am J Disaster Med. 2009 May-Jun;4(3):147-52.

PMID:
19739457
19.

Absence of anomalous copper vibrations in YBa2Cu3O7- delta.

Hecker NE, Mook HA, Harvey JA, Hill NW, Moxon MC, Golovchenko JA.

Phys Rev B Condens Matter. 1994 Dec 1;50(21):16129-16132. No abstract available.

PMID:
9975996

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