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Items: 1 to 50 of 233

1.

Validation of COI metabarcoding primers for terrestrial arthropods.

Elbrecht V, Braukmann TWA, Ivanova NV, Prosser SWJ, Hajibabaei M, Wright M, Zakharov EV, Hebert PDN, Steinke D.

PeerJ. 2019 Oct 7;7:e7745. doi: 10.7717/peerj.7745. eCollection 2019.

2.

DNA barcode library of megadiverse Austrian Noctuoidea (Lepidoptera) - a nearly perfect match of Linnean taxonomy.

Huemer P, Wieser C, Stark W, Hebert PDN, Wiesmair B.

Biodivers Data J. 2019 Aug 7;7:e37734. doi: 10.3897/BDJ.7.e37734. eCollection 2019.

3.

Assembling a DNA barcode reference library for the spiders (Arachnida: Araneae) of Pakistan.

Ashfaq M, Blagoev G, Tahir HM, Khan AM, Mukhtar MK, Akhtar S, Butt A, Mansoor S, Hebert PDN.

PLoS One. 2019 May 22;14(5):e0217086. doi: 10.1371/journal.pone.0217086. eCollection 2019.

4.

Using eDNA to biomonitor the fish community in a tropical oligotrophic lake.

Valdez-Moreno M, Ivanova NV, Elías-Gutiérrez M, Pedersen SL, Bessonov K, Hebert PDN.

PLoS One. 2019 Apr 22;14(4):e0215505. doi: 10.1371/journal.pone.0215505. eCollection 2019.

5.

A DNA barcode library for 5,200 German flies and midges (Insecta: Diptera) and its implications for metabarcoding-based biomonitoring.

Morinière J, Balke M, Doczkal D, Geiger MF, Hardulak LA, Haszprunar G, Hausmann A, Hendrich L, Regalado L, Rulik B, Schmidt S, Wägele JW, Hebert PDN.

Mol Ecol Resour. 2019 Jul;19(4):900-928. doi: 10.1111/1755-0998.13022. Epub 2019 May 14.

PMID:
30977972
6.

Metabarcoding a diverse arthropod mock community.

Braukmann TWA, Ivanova NV, Prosser SWJ, Elbrecht V, Steinke D, Ratnasingham S, de Waard JR, Sones JE, Zakharov EV, Hebert PDN.

Mol Ecol Resour. 2019 May;19(3):711-727. doi: 10.1111/1755-0998.13008.

PMID:
30779309
7.

Database establishment for the secondary fungal DNA barcode translational elongation factor 1α (TEF1α) 1.

Meyer W, Irinyi L, Hoang MTV, Robert V, Garcia-Hermoso D, Desnos-Ollivier M, Yurayart C, Tsang CC, Lee CY, Woo PCY, Pchelin IM, Uhrlaß S, Nenoff P, Chindamporn A, Chen S, Hebert PDN, Sorrell TC; ISHAM barcoding of pathogenic fungi working group.

Genome. 2019 Mar;62(3):160-169. doi: 10.1139/gen-2018-0083. Epub 2018 Nov 22.

8.

Recalibrating the molecular clock for Arctic marine invertebrates based on DNA barcodes 1.

Loeza-Quintana T, Carr CM, Khan T, Bhatt YA, Lyon SP, Hebert PDN, Adamowicz SJ.

Genome. 2019 Mar;62(3):200-216. doi: 10.1139/gen-2018-0107. Epub 2018 Nov 21.

9.

Approaches to integrating genetic data into ecological networks.

Clare EL, Fazekas AJ, Ivanova NV, Floyd RM, Hebert PDN, Adams AM, Nagel J, Girton R, Newmaster SG, Fenton MB.

Mol Ecol. 2019 Jan;28(2):503-519. doi: 10.1111/mec.14941. Epub 2018 Dec 10.

PMID:
30427082
10.

Flower-visitor communities of an arcto-alpine plant-Global patterns in species richness, phylogenetic diversity and ecological functioning.

Tiusanen M, Huotari T, Hebert PDN, Andersson T, Asmus A, Bêty J, Davis E, Gale J, Hardwick B, Hik D, Körner C, Lanctot RB, Loonen MJJE, Partanen R, Reischke K, Saalfeld ST, Senez-Gagnon F, Smith PA, Šulavík J, Syvänperä I, Urbanowicz C, Williams S, Woodard P, Zaika Y, Roslin T.

Mol Ecol. 2019 Jan;28(2):318-335. doi: 10.1111/mec.14932. Epub 2018 Dec 7.

11.

Large geographic distance versus small DNA barcode divergence: Insights from a comparison of European to South Siberian Lepidoptera.

Huemer P, Hebert PDN, Mutanen M, Wieser C, Wiesmair B, Hausmann A, Yakovlev R, Möst M, Gottsberger B, Strutzenberger P, Fiedler K.

PLoS One. 2018 Nov 2;13(11):e0206668. doi: 10.1371/journal.pone.0206668. eCollection 2018.

12.

Characterization and comparison of poorly known moth communities through DNA barcoding in two Afrotropical environments in Gabon 1.

Delabye S, Rougerie R, Bayendi S, Andeime-Eyene M, Zakharov EV, deWaard JR, Hebert PDN, Kamgang R, Le Gall P, Lopez-Vaamonde C, Mavoungou JF, Moussavou G, Moulin N, Oslisly R, Rahola N, Sebag D, Decaëns T.

Genome. 2019 Mar;62(3):96-107. doi: 10.1139/gen-2018-0063. Epub 2018 Oct 2.

13.

Expedited assessment of terrestrial arthropod diversity by coupling Malaise traps with DNA barcoding 1.

deWaard JR, Levesque-Beaudin V, deWaard SL, Ivanova NV, McKeown JTA, Miskie R, Naik S, Perez KHJ, Ratnasingham S, Sobel CN, Sones JE, Steinke C, Telfer AC, Young AD, Young MR, Zakharov EV, Hebert PDN.

Genome. 2019 Mar;62(3):85-95. doi: 10.1139/gen-2018-0093. Epub 2018 Sep 26.

14.

A survey of molecular diversity and population genetic structure in North American clearwing moths (Lepidoptera: Sesiidae) using cytochrome c oxidase I.

Lait LA, Hebert PDN.

PLoS One. 2018 Aug 22;13(8):e0202281. doi: 10.1371/journal.pone.0202281. eCollection 2018.

15.

Slippage of degenerate primers can cause variation in amplicon length.

Elbrecht V, Hebert PDN, Steinke D.

Sci Rep. 2018 Jul 20;8(1):10999. doi: 10.1038/s41598-018-29364-z.

16.

Insect diversity in the Saharo-Arabian region: Revealing a little-studied fauna by DNA barcoding.

Ashfaq M, Sabir JSM, El-Ansary HO, Perez K, Levesque-Beaudin V, Khan AM, Rasool A, Gallant C, Addesi J, Hebert PDN.

PLoS One. 2018 Jul 9;13(7):e0199965. doi: 10.1371/journal.pone.0199965. eCollection 2018.

17.

Stable baselines of temporal turnover underlie high beta diversity in tropical arthropod communities.

D'Souza ML, Hebert PDN.

Mol Ecol. 2018 May;27(10):2447-2460. doi: 10.1111/mec.14693.

PMID:
29676034
18.

A Sequel to Sanger: amplicon sequencing that scales.

Hebert PDN, Braukmann TWA, Prosser SWJ, Ratnasingham S, deWaard JR, Ivanova NV, Janzen DH, Hallwachs W, Naik S, Sones JE, Zakharov EV.

BMC Genomics. 2018 Mar 27;19(1):219. doi: 10.1186/s12864-018-4611-3.

19.
20.

Use of genetic, climatic, and microbiological data to inform reintroduction of a regionally extinct butterfly.

Dincă V, Bálint Z, Vodă R, Dapporto L, Hebert PDN, Vila R.

Conserv Biol. 2018 Aug;32(4):828-837. doi: 10.1111/cobi.13111. Epub 2018 Apr 25.

PMID:
29569277
21.

Using herbarium-derived DNAs to assemble a large-scale DNA barcode library for the vascular plants of Canada.

Kuzmina ML, Braukmann TWA, Fazekas AJ, Graham SW, Dewaard SL, Rodrigues A, Bennett BA, Dickinson TA, Saarela JM, Catling PM, Newmaster SG, Percy DM, Fenneman E, Lauron-Moreau A, Ford B, Gillespie L, Subramanyam R, Whitton J, Jennings L, Metsger D, Warne CP, Brown A, Sears E, Dewaard JR, Zakharov EV, Hebert PDN.

Appl Plant Sci. 2017 Dec 22;5(12). pii: apps.1700079. doi: 10.3732/apps.1700079. eCollection 2017 Dec.

22.

Barcoding the butterflies of southern South America: Species delimitation efficacy, cryptic diversity and geographic patterns of divergence.

Lavinia PD, Núñez Bustos EO, Kopuchian C, Lijtmaer DA, García NC, Hebert PDN, Tubaro PL.

PLoS One. 2017 Oct 19;12(10):e0186845. doi: 10.1371/journal.pone.0186845. eCollection 2017.

23.

Escaping introns in COI through cDNA barcoding of mushrooms: Pleurotus as a test case.

Avin FA, Subha B, Tan YS, Braukmann TWA, Vikineswary S, Hebert PDN.

Ecol Evol. 2017 Jul 29;7(17):6972-6980. doi: 10.1002/ece3.3049. eCollection 2017 Sep.

24.

Close congruence between Barcode Index Numbers (bins) and species boundaries in the Erebidae (Lepidoptera: Noctuoidea) of the Iberian Peninsula.

Ortiz AS, Rubio RM, Guerrero JJ, Garre MJ, Serrano J, Hebert PDN, Hausmann A.

Biodivers Data J. 2017 Aug 8;(5):e19840. doi: 10.3897/BDJ.5.e19840. eCollection 2017.

25.

Nuclear genomes distinguish cryptic species suggested by their DNA barcodes and ecology.

Janzen DH, Burns JM, Cong Q, Hallwachs W, Dapkey T, Manjunath R, Hajibabaei M, Hebert PDN, Grishin NV.

Proc Natl Acad Sci U S A. 2017 Aug 1;114(31):8313-8318. doi: 10.1073/pnas.1621504114. Epub 2017 Jul 17.

26.

Probing planetary biodiversity with DNA barcodes: The Noctuoidea of North America.

Zahiri R, Lafontaine JD, Schmidt BC, deWaard JR, Zakharov EV, Hebert PDN.

PLoS One. 2017 Jun 1;12(6):e0178548. doi: 10.1371/journal.pone.0178548. eCollection 2017.

27.

A DNA barcode library for Germany's mayflies, stoneflies and caddisflies (Ephemeroptera, Plecoptera and Trichoptera).

Morinière J, Hendrich L, Balke M, Beermann AJ, König T, Hess M, Koch S, Müller R, Leese F, Hebert PDN, Hausmann A, Schubart CD, Haszprunar G.

Mol Ecol Resour. 2017 Nov;17(6):1293-1307. doi: 10.1111/1755-0998.12683. Epub 2017 Jun 27.

PMID:
28449274
28.

The School Malaise Trap Program: Coupling educational outreach with scientific discovery.

Steinke D, Breton V, Berzitis E, Hebert PDN.

PLoS Biol. 2017 Apr 24;15(4):e2001829. doi: 10.1371/journal.pbio.2001829. eCollection 2017 Apr.

29.

Mapping global biodiversity connections with DNA barcodes: Lepidoptera of Pakistan.

Ashfaq M, Akhtar S, Rafi MA, Mansoor S, Hebert PD.

PLoS One. 2017 Mar 24;12(3):e0174749. doi: 10.1371/journal.pone.0174749. eCollection 2017.

30.

DNA barcoding as an aid for species identification in austral black flies (Insecta: Diptera: Simuliidae).

Hernández-Triana LM, Montes De Oca F, Prosser SW, Hebert PD, Gregory TR, McMurtrie S.

Genome. 2017 Apr;60(4):348-357. doi: 10.1139/gen-2015-0168. Epub 2016 Nov 21.

PMID:
28177841
31.

Testing the Efficacy of DNA Barcodes for Identifying the Vascular Plants of Canada.

Braukmann TW, Kuzmina ML, Sills J, Zakharov EV, Hebert PD.

PLoS One. 2017 Jan 10;12(1):e0169515. doi: 10.1371/journal.pone.0169515. eCollection 2017.

32.

Testing the Global Malaise Trap Program - How well does the current barcode reference library identify flying insects in Germany?

Geiger MF, Moriniere J, Hausmann A, Haszprunar G, Wägele W, Hebert PD, Rulik B.

Biodivers Data J. 2016 Dec 1;(4):e10671. eCollection 2016.

33.

Exploring Canadian Echinoderm Diversity through DNA Barcodes.

Layton KK, Corstorphine EA, Hebert PD.

PLoS One. 2016 Nov 21;11(11):e0166118. doi: 10.1371/journal.pone.0166118. eCollection 2016.

34.

Century-Old DNA Barcodes Reveal Phylogenetic Placement of the Extinct Jamaican Sunset Moth, Urania sloanus Cramer (Lepidoptera: Uraniidae).

Nazari V, Schmidt BC, Prosser S, Hebert PD.

PLoS One. 2016 Oct 20;11(10):e0164405. doi: 10.1371/journal.pone.0164405. eCollection 2016.

35.

DNA barcodes for bio-surveillance: regulated and economically important arthropod plant pests.

Ashfaq M, Hebert PD.

Genome. 2016 Nov;59(11):933-945. Epub 2016 Aug 30. Review.

36.

A DNA Barcode Library for North American Pyraustinae (Lepidoptera: Pyraloidea: Crambidae).

Yang Z, Landry JF, Hebert PD.

PLoS One. 2016 Oct 13;11(10):e0161449. doi: 10.1371/journal.pone.0161449. eCollection 2016.

37.

One fly to rule them all-muscid flies are the key pollinators in the Arctic.

Tiusanen M, Hebert PD, Schmidt NM, Roslin T.

Proc Biol Sci. 2016 Sep 28;283(1839). pii: 20161271.

38.

Linking adults and immatures of South African marine fishes.

Steinke D, Connell AD, Hebert PD.

Genome. 2016 Nov;59(11):959-967. Epub 2016 Apr 20.

39.

Calibrating the taxonomy of a megadiverse insect family: 3000 DNA barcodes from geometrid type specimens (Lepidoptera, Geometridae).

Hausmann A, Miller SE, Holloway JD, deWaard JR, Pollock D, Prosser SW, Hebert PD.

Genome. 2016 Sep;59(9):671-84. doi: 10.1139/gen-2015-0197. Epub 2016 Apr 22.

40.

Rapid identification of the botanical and entomological sources of honey using DNA metabarcoding.

Prosser SWJ, Hebert PDN.

Food Chem. 2017 Jan 1;214:183-191. doi: 10.1016/j.foodchem.2016.07.077. Epub 2016 Jul 12.

PMID:
27507464
41.

Counting animal species with DNA barcodes: Canadian insects.

Hebert PD, Ratnasingham S, Zakharov EV, Telfer AC, Levesque-Beaudin V, Milton MA, Pedersen S, Jannetta P, deWaard JR.

Philos Trans R Soc Lond B Biol Sci. 2016 Sep 5;371(1702). pii: 20150333. doi: 10.1098/rstb.2015.0333.

42.

From writing to reading the encyclopedia of life.

Hebert PD, Hollingsworth PM, Hajibabaei M.

Philos Trans R Soc Lond B Biol Sci. 2016 Sep 5;371(1702). pii: 20150321. doi: 10.1098/rstb.2015.0321.

43.

DNA Barcoding of Marine Metazoans.

Steinke D, Prosser SW, Hebert PD.

Methods Mol Biol. 2016;1452:155-68. doi: 10.1007/978-1-4939-3774-5_10.

PMID:
27460376
44.

Historical and contemporary factors generate unique butterfly communities on islands.

Vodă R, Dapporto L, Dincă V, Shreeve TG, Khaldi M, Barech G, Rebbas K, Sammut P, Scalercio S, Hebert PD, Vila R.

Sci Rep. 2016 Jun 29;6:28828. doi: 10.1038/srep28828.

45.

Species-Level Para- and Polyphyly in DNA Barcode Gene Trees: Strong Operational Bias in European Lepidoptera.

Mutanen M, Kivelä SM, Vos RA, Doorenweerd C, Ratnasingham S, Hausmann A, Huemer P, Dincă V, van Nieukerken EJ, Lopez-Vaamonde C, Vila R, Aarvik L, Decaëns T, Efetov KA, Hebert PD, Johnsen A, Karsholt O, Pentinsaari M, Rougerie R, Segerer A, Tarmann G, Zahiri R, Godfray HC.

Syst Biol. 2016 Nov;65(6):1024-1040. Epub 2016 Jun 10.

46.

Assessing DNA Barcodes for Species Identification in North American Reptiles and Amphibians in Natural History Collections.

Chambers EA, Hebert PD.

PLoS One. 2016 Apr 26;11(4):e0154363. doi: 10.1371/journal.pone.0154363. eCollection 2016.

47.

Turning Up the Heat on a Hotspot: DNA Barcodes Reveal 80% More Species of Geometrid Moths along an Andean Elevational Gradient.

Brehm G, Hebert PD, Colwell RK, Adams MO, Bodner F, Friedemann K, Möckel L, Fiedler K.

PLoS One. 2016 Mar 9;11(3):e0150327. doi: 10.1371/journal.pone.0150327. eCollection 2016.

48.

DNA Barcode Analysis of Thrips (Thysanoptera) Diversity in Pakistan Reveals Cryptic Species Complexes.

Iftikhar R, Ashfaq M, Rasool A, Hebert PD.

PLoS One. 2016 Jan 7;11(1):e0146014. doi: 10.1371/journal.pone.0146014. eCollection 2016.

49.

Taxonomy 2.0: Sequencing of old type specimens supports the description of two new species of the Lasiocampa decolorata group from Morocco (Lepidoptera, Lasiocampidae).

Speidel W, Hausmann A, Müller GC, Kravchenko V, Mooser J, Witt TJ, Khallaayoune K, Prosser S, Hebert PD.

Zootaxa. 2015 Aug 11;3999(3):401-12. doi: 10.11646/zootaxa.3999.3.5.

PMID:
26623584
50.

Establishing a community-wide DNA barcode library as a new tool for arctic research.

Wirta H, Várkonyi G, Rasmussen C, Kaartinen R, Schmidt NM, Hebert PD, Barták M, Blagoev G, Disney H, Ertl S, Gjelstrup P, Gwiazdowicz DJ, Huldén L, Ilmonen J, Jakovlev J, Jaschhof M, Kahanpää J, Kankaanpää T, Krogh PH, Labbee R, Lettner C, Michelsen V, Nielsen SA, Nielsen TR, Paasivirta L, Pedersen S, Pohjoismäki J, Salmela J, Vilkamaa P, Väre H, von Tschirnhaus M, Roslin T.

Mol Ecol Resour. 2016 May;16(3):809-22. doi: 10.1111/1755-0998.12489. Epub 2015 Dec 14.

PMID:
26602739

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