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Items: 20

1.

Mosaic mitochondrial-plastid insertions into the nuclear genome show evidence of both non-homologous end joining and homologous recombination.

Portugez S, Martin WF, Hazkani-Covo E.

BMC Evol Biol. 2018 Nov 3;18(1):162. doi: 10.1186/s12862-018-1279-x.

2.

Failure to Recover Major Events of Gene Flux in Real Biological Data Due to Method Misapplication.

Kapust N, Nelson-Sathi S, Schönfeld B, Hazkani-Covo E, Bryant D, Lockhart PJ, Röttger M, Xavier JC, Martin WF.

Genome Biol Evol. 2018 Apr 1;10(5):1198-1209. doi: 10.1093/gbe/evy080.

3.

The Prevalence and Evolutionary Conservation of Inverted Repeats in Proteobacteria.

Lavi B, Levy Karin E, Pupko T, Hazkani-Covo E.

Genome Biol Evol. 2018 Mar 1;10(3):918-927. doi: 10.1093/gbe/evy044.

4.

Whole Genome Sequence Analysis of Mutations Accumulated in rad27Δ Yeast Strains with Defects in the Processing of Okazaki Fragments Indicates Template-Switching Events.

Omer S, Lavi B, Mieczkowski PA, Covo S, Hazkani-Covo E.

G3 (Bethesda). 2017 Nov 6;7(11):3775-3787. doi: 10.1534/g3.117.300262.

5.

Quantifying the Number of Independent Organelle DNA Insertions in Genome Evolution and Human Health.

Hazkani-Covo E, Martin WF.

Genome Biol Evol. 2017 May 1;9(5):1190-1203. doi: 10.1093/gbe/evx078.

6.

Endosymbiotic origin and differential loss of eukaryotic genes.

Ku C, Nelson-Sathi S, Roettger M, Sousa FL, Lockhart PJ, Bryant D, Hazkani-Covo E, McInerney JO, Landan G, Martin WF.

Nature. 2015 Aug 27;524(7566):427-32. doi: 10.1038/nature14963. Epub 2015 Aug 19.

PMID:
26287458
7.

Endosymbiotic gene transfer from prokaryotic pangenomes: Inherited chimerism in eukaryotes.

Ku C, Nelson-Sathi S, Roettger M, Garg S, Hazkani-Covo E, Martin WF.

Proc Natl Acad Sci U S A. 2015 Aug 18;112(33):10139-46. doi: 10.1073/pnas.1421385112. Epub 2015 Mar 2.

8.

Nonrandom distribution of interhomolog recombination events induced by breakage of a dicentric chromosome in Saccharomyces cerevisiae.

Song W, Gawel M, Dominska M, Greenwell PW, Hazkani-Covo E, Bloom K, Petes TD.

Genetics. 2013 May;194(1):69-80. doi: 10.1534/genetics.113.150144. Epub 2013 Feb 14.

9.

High-resolution genome-wide analysis of irradiated (UV and γ-rays) diploid yeast cells reveals a high frequency of genomic loss of heterozygosity (LOH) events.

St Charles J, Hazkani-Covo E, Yin Y, Andersen SL, Dietrich FS, Greenwell PW, Malc E, Mieczkowski P, Petes TD.

Genetics. 2012 Apr;190(4):1267-84. doi: 10.1534/genetics.111.137927. Epub 2012 Jan 20.

10.

Directed networks reveal genomic barriers and DNA repair bypasses to lateral gene transfer among prokaryotes.

Popa O, Hazkani-Covo E, Landan G, Martin W, Dagan T.

Genome Res. 2011 Apr;21(4):599-609. doi: 10.1101/gr.115592.110. Epub 2011 Jan 26.

11.

Molecular poltergeists: mitochondrial DNA copies (numts) in sequenced nuclear genomes.

Hazkani-Covo E, Zeller RM, Martin W.

PLoS Genet. 2010 Feb 12;6(2):e1000834. doi: 10.1371/journal.pgen.1000834.

12.

Linking big: the continuing promise of evolutionary synthesis.

Sidlauskas B, Ganapathy G, Hazkani-Covo E, Jenkins KP, Lapp H, McCall LW, Price S, Scherle R, Spaeth PA, Kidd DM.

Evolution. 2010 Apr 1;64(4):871-80. doi: 10.1111/j.1558-5646.2009.00892.x. Epub 2009 Nov 6.

PMID:
19895550
13.

Mitochondrial insertions into primate nuclear genomes suggest the use of numts as a tool for phylogeny.

Hazkani-Covo E.

Mol Biol Evol. 2009 Oct;26(10):2175-9. doi: 10.1093/molbev/msp131. Epub 2009 Jul 3.

PMID:
19578158
14.

Numt-mediated double-strand break repair mitigates deletions during primate genome evolution.

Hazkani-Covo E, Covo S.

PLoS Genet. 2008 Oct;4(10):e1000237. doi: 10.1371/journal.pgen.1000237. Epub 2008 Oct 24.

15.

A comparative analysis of numt evolution in human and chimpanzee.

Hazkani-Covo E, Graur D.

Mol Biol Evol. 2007 Jan;24(1):13-8. Epub 2006 Oct 20.

PMID:
17056643
16.

Evolutionary conservation of bacterial operons: does transcriptional connectivity matter?

Hazkani-Covo E, Graur D.

Genetica. 2005 Jul;124(2-3):145-66.

PMID:
16134329
17.

In search of the vertebrate phylotypic stage: a molecular examination of the developmental hourglass model and von Baer's third law.

Hazkani-Covo E, Wool D, Graur D.

J Exp Zool B Mol Dev Evol. 2005 Mar 15;304(2):150-8. Erratum in: J Exp Zoolog B Mol Dev Evol. 2005 May 15;304(3):268.

PMID:
15779077
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