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Items: 40

1.

The acute transcriptome response of the midbrain/diencephalon to injury in the adult mummichog (Fundulus heteroclitus).

Bisese EC, Ciuba CM, Davidson AL, Kaushik A, Mullen SM, Barth JL, Hazard ES, Wilson RC, Hardiman G, Hollis DM.

Mol Brain. 2019 Dec 30;12(1):119. doi: 10.1186/s13041-019-0542-4.

2.

SLC36A1-mTORC1 signaling drives acquired resistance to CDK4/6 inhibitors.

Yoshida A, Bu Y, Qie S, Wrangle J, Camp ER, Hazard ES, Hardiman G, de Leeuw R, Knudsen KE, Diehl JA.

Sci Adv. 2019 Sep 18;5(9):eaax6352. doi: 10.1126/sciadv.aax6352. eCollection 2019 Sep.

3.

GAIL: An interactive webserver for inference and dynamic visualization of gene-gene associations based on gene ontology guided mining of biomedical literature.

Couch D, Yu Z, Nam JH, Allen C, Ramos PS, da Silveira WA, Hunt KJ, Hazard ES, Hardiman G, Lawson A, Chung D.

PLoS One. 2019 Jul 1;14(7):e0219195. doi: 10.1371/journal.pone.0219195. eCollection 2019.

4.

Primary cilia defects causing mitral valve prolapse.

Toomer KA, Yu M, Fulmer D, Guo L, Moore KS, Moore R, Drayton KD, Glover J, Peterson N, Ramos-Ortiz S, Drohan A, Catching BJ, Stairley R, Wessels A, Lipschutz JH, Delling FN, Jeunemaitre X, Dina C, Collins RL, Brand H, Talkowski ME, Del Monte F, Mukherjee R, Awgulewitsch A, Body S, Hardiman G, Hazard ES, da Silveira WA, Wang B, Leyne M, Durst R, Markwald RR, Le Scouarnec S, Hagege A, Le Tourneau T, Kohl P, Rog-Zielinska EA, Ellinor PT, Levine RA, Milan DJ, Schott JJ, Bouatia-Naji N, Slaugenhaupt SA, Norris RA.

Sci Transl Med. 2019 May 22;11(493). pii: eaax0290. doi: 10.1126/scitranslmed.aax0290.

PMID:
31118289
5.

Molecular Profiling of RNA Tumors Using High-Throughput RNA Sequencing: From Raw Data to Systems Level Analyses.

da Silveira WA, Hazard ES, Chung D, Hardiman G.

Methods Mol Biol. 2019;1908:185-204. doi: 10.1007/978-1-4939-9004-7_13.

PMID:
30649729
6.

Molecular Profiling of RNA Tumors Using High-Throughput RNA Sequencing: Overview of Library Preparation Methods.

Courtney SM, da Silveira WA, Hazard ES, Hardiman G.

Methods Mol Biol. 2019;1908:169-184. doi: 10.1007/978-1-4939-9004-7_12.

PMID:
30649728
7.

Transcriptomic analysis of short-term 17α-ethynylestradiol exposure in two Californian sentinel fish species sardine (Sardinops sagax) and mackerel (Scomber japonicus).

Renaud L, Agarwal N, Richards DJ, Falcinelli S, Hazard ES, Carnevali O, Hyde J, Hardiman G.

Environ Pollut. 2019 Jan;244:926-937. doi: 10.1016/j.envpol.2018.10.058. Epub 2018 Oct 20.

PMID:
30469287
8.

Interplay Between MicroRNAs and Targeted Genes in Cellular Homeostasis of Adult Zebrafish (Danio rerio).

Renaud L, da Silveira WA, Glen WB Jr, Hazard ES; and, Hardiman G.

Curr Genomics. 2018 Nov;19(7):615-629. doi: 10.2174/1389202919666180503124522.

9.

miRmapper: A Tool for Interpretation of miRNA⁻mRNA Interaction Networks.

da Silveira WA, Renaud L, Simpson J, Glen WB Jr, Hazard ES, Chung D, Hardiman G.

Genes (Basel). 2018 Sep 14;9(9). pii: E458. doi: 10.3390/genes9090458.

10.

MAPK Reliance via Acquired CDK4/6 Inhibitor Resistance in Cancer.

de Leeuw R, McNair C, Schiewer MJ, Neupane NP, Brand LJ, Augello MA, Li Z, Cheng LC, Yoshida A, Courtney SM, Hazard ES, Hardiman G, Hussain MH, Diehl JA, Drake JM, Kelly WK, Knudsen KE.

Clin Cancer Res. 2018 Sep 1;24(17):4201-4214. doi: 10.1158/1078-0432.CCR-18-0410. Epub 2018 May 8.

11.

SUMO Modification of the RNA-Binding Protein La Regulates Cell Proliferation and STAT3 Protein Stability.

Kota V, Sommer G, Hazard ES, Hardiman G, Twiss JL, Heise T.

Mol Cell Biol. 2017 Dec 29;38(2). pii: e00129-17. doi: 10.1128/MCB.00129-17. Print 2018 Jan 15.

12.

The Plasticizer Bisphenol A Perturbs the Hepatic Epigenome: A Systems Level Analysis of the miRNome.

Renaud L, Silveira WAD, Hazard ES, Simpson J, Falcinelli S, Chung D, Carnevali O, Hardiman G.

Genes (Basel). 2017 Oct 13;8(10). pii: E269. doi: 10.3390/genes8100269.

13.

Larval Red Drum (Sciaenops ocellatus) Sublethal Exposure to Weathered Deepwater Horizon Crude Oil: Developmental and Transcriptomic Consequences.

Xu EG, Khursigara AJ, Magnuson J, Hazard ES, Hardiman G, Esbaugh AJ, Roberts AP, Schlenk D.

Environ Sci Technol. 2017 Sep 5;51(17):10162-10172. doi: 10.1021/acs.est.7b02037. Epub 2017 Aug 18.

PMID:
28768411
14.

Developmental transcriptomic analyses for mechanistic insights into critical pathways involved in embryogenesis of pelagic mahi-mahi (Coryphaena hippurus).

Xu EG, Mager EM, Grosell M, Stieglitz JD, Hazard ES, Hardiman G, Schlenk D.

PLoS One. 2017 Jul 10;12(7):e0180454. doi: 10.1371/journal.pone.0180454. eCollection 2017.

15.

Novel transcriptome assembly and comparative toxicity pathway analysis in mahi-mahi (Coryphaena hippurus) embryos and larvae exposed to Deepwater Horizon oil.

Xu EG, Mager EM, Grosell M, Hazard ES, Hardiman G, Schlenk D.

Sci Rep. 2017 Mar 15;7:44546. doi: 10.1038/srep44546.

16.

Genomics pipelines and data integration: challenges and opportunities in the research setting.

Davis-Turak J, Courtney SM, Hazard ES, Glen WB Jr, da Silveira WA, Wesselman T, Harbin LP, Wolf BJ, Chung D, Hardiman G.

Expert Rev Mol Diagn. 2017 Mar;17(3):225-237. doi: 10.1080/14737159.2017.1282822. Epub 2017 Jan 25. Review.

17.

Repression of caspase-3 and RNA-binding protein HuR cleavage by cyclooxygenase-2 promotes drug resistance in oral squamous cell carcinoma.

Janakiraman H, House RP, Talwar S, Courtney SM, Hazard ES, Hardiman G, Mehrotra S, Howe PH, Gangaraju V, Palanisamy V.

Oncogene. 2017 Jun 1;36(22):3137-3148. doi: 10.1038/onc.2016.451. Epub 2016 Dec 12.

18.

Systems analysis of the prostate transcriptome in African-American men compared with European-American men.

Hardiman G, Savage SJ, Hazard ES, Wilson RC, Courtney SM, Smith MT, Hollis BW, Halbert CH, Gattoni-Celli S.

Pharmacogenomics. 2016 Jul;17(10):1129-1143. Epub 2016 Jun 30.

19.

Time- and Oil-Dependent Transcriptomic and Physiological Responses to Deepwater Horizon Oil in Mahi-Mahi (Coryphaena hippurus) Embryos and Larvae.

Xu EG, Mager EM, Grosell M, Pasparakis C, Schlenker LS, Stieglitz JD, Benetti D, Hazard ES, Courtney SM, Diamante G, Freitas J, Hardiman G, Schlenk D.

Environ Sci Technol. 2016 Jul 19;50(14):7842-51. doi: 10.1021/acs.est.6b02205. Epub 2016 Jul 8.

PMID:
27348429
20.

RNA-binding protein CELF1 promotes tumor growth and alters gene expression in oral squamous cell carcinoma.

House RP, Talwar S, Hazard ES, Hill EG, Palanisamy V.

Oncotarget. 2015 Dec 22;6(41):43620-34. doi: 10.18632/oncotarget.6204.

21.

Aquaporin 0-calmodulin interaction and the effect of aquaporin 0 phosphorylation.

Rose KM, Wang Z, Magrath GN, Hazard ES, Hildebrandt JD, Schey KL.

Biochemistry. 2008 Jan 8;47(1):339-47. Epub 2007 Dec 15.

PMID:
18081321
22.

The rat Apg3p/Aut1p homolog is upregulated by ischemic preconditioning in the retina.

Wu BX, Darden AG, Laser M, Li Y, Crosson CE, Hazard ES 3rd, Ma JX.

Mol Vis. 2006 Oct 26;12:1292-302.

23.

A novel Xenopus SWS2, P434 visual pigment: structure, cellular location, and spectral analyses.

Darden AG, Wu BX, Znoiko SL, Hazard ES 3rd, Kono M, Crouch RK, Ma JX.

Mol Vis. 2003 May 16;9:191-9.

24.

Salamander UV cone pigment: sequence, expression, and spectral properties.

Ma JX, Kono M, Xu L, Das J, Ryan JC, Hazard ES 3rd, Oprian DD, Crouch RK.

Vis Neurosci. 2001 May-Jun;18(3):393-9.

PMID:
11497415
25.

Categorizing reactivity of bacteriorhodopsin cysteine mutants crosslinking to 4-bromoretinal.

Datta-Gupta N, Crouch RK, Hazard ES 3rd.

Biochem Mol Biol Int. 1999 May;47(5):773-80.

PMID:
10365248
26.

Novel retroviral sequences are expressed in the epididymis and uterus of Syrian hamsters.

DeHaven JE, Schwartz DA, Dahm MW, Hazard ES 3rd, Trifiletti R, Lacy ER, Norris JS.

J Gen Virol. 1998 Nov;79 ( Pt 11):2687-94.

PMID:
9820144
27.

Molecular cloning of the salamander red and blue cone visual pigments.

Xu L, Hazard ES 3rd, Lockman DK, Crouch RK, Ma J.

Mol Vis. 1998 Jul 15;4:10.

28.

Molecular cloning of a rhodopsin gene from salamander rods.

Chen N, Ma JX, Corson DW, Hazard ES, Crouch RK.

Invest Ophthalmol Vis Sci. 1996 Aug;37(9):1907-13.

PMID:
8759361
29.

Probing of the retinal binding site of bacteriorhodopsin by affinity labeling.

Feng Y, Menick DR, Katz BM, Beischel CJ, Hazard ES, Misra S, Ebrey TG, Crouch RK.

Biochemistry. 1994 Sep 27;33(38):11624-30.

PMID:
7918376
30.

Evaluation of photoaffinity labeled sites of bacteriorhodopsin using molecular modeling.

Beischel CJ, Gray K, Hazard ES 3rd, Knapp DR, Crouch RK.

Biochem Mol Biol Int. 1994 Apr;32(5):933-9.

PMID:
8069243
31.

6 alpha-Hydroxytaxol: isolation and identification of the major metabolite of taxol in human liver microsomes.

Kumar GN, Oatis JE Jr, Thornburg KR, Heldrich FJ, Hazard ES 3rd, Walle T.

Drug Metab Dispos. 1994 Jan-Feb;22(1):177-9. No abstract available.

PMID:
7908626
32.

Biosynthetic incorporation of m-fluorotyrosine into bacteriorhodopsin.

Hazard ES 3rd, Govindjee R, Ebrey TG, Crouch RK.

Photochem Photobiol. 1992 Dec;56(6):929-34.

PMID:
1492136
33.

Interphotoreceptor retinoid-binding protein and alpha-tocopherol preserve the isomeric and oxidation state of retinol.

Crouch RK, Hazard ES, Lind T, Wiggert B, Chader G, Corson DW.

Photochem Photobiol. 1992 Aug;56(2):251-5.

PMID:
1502268
34.

Differential effect of pH on thromboxane A2/prostaglandin H2 receptor agonist and antagonist binding in human platelets.

Mayeux PR, Morinelli TA, Williams TC, Hazard ES, Mais DE, Oatis JE, Baron DA, Halushka PV.

J Biol Chem. 1991 Jul 25;266(21):13752-8.

35.

Flash photolysis of the serum albumin-heme-CO complex.

Marden MC, Hazard ES, Leclerc L, Gibson QH.

Biochemistry. 1989 May 16;28(10):4422-6.

PMID:
2765494
36.

Geminate ligand recombination as a probe of the R, T equilibrium in hemoglobin.

Marden MC, Hazard ES, Kimble C, Gibson QH.

Eur J Biochem. 1987 Dec 15;169(3):611-5.

37.

Testing the two-state model: anomalous effector binding to human hemoglobin.

Marden MC, Hazard ES, Gibson QH.

Biochemistry. 1986 Nov 18;25(23):7591-6.

PMID:
3801435
38.

Protoheme-carbon monoxide geminate kinetics.

Marden MC, Hazard ES 3rd, Gibson QH.

Biochemistry. 1986 May 20;25(10):2786-92.

PMID:
3718920
39.
40.

Erythrocytic organic phosphates: diel and seasonal cycles in the frog, Rana berlandieri.

Hutchison VH, Hazard ES 3rd.

Comp Biochem Physiol A Comp Physiol. 1984;79(4):533-8.

PMID:
6150789

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