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Items: 28

1.

Long noncoding RNAs in gut stem cells.

Hatzis P, Snippert HJG.

Nat Cell Biol. 2018 Oct;20(10):1106-1107. doi: 10.1038/s41556-018-0208-y. No abstract available.

PMID:
30258127
2.

Crosstalk mechanisms between the WNT signaling pathway and long non-coding RNAs.

Zarkou V, Galaras A, Giakountis A, Hatzis P.

Noncoding RNA Res. 2018 Apr 12;3(2):42-53. doi: 10.1016/j.ncrna.2018.04.001. eCollection 2018 Jun. Review.

3.

Correction: The Leukemia-Associated Mllt10/Af10-Dot1l Are Tcf4/β-Catenin Coactivators Essential for Intestinal Homeostasis.

Mahmoudi T, Boj SF, Hatzis P, Li VS, Taouatas N, Vries RG, Teunissen H, Begthel H, Korving J, Mohammed S, Heck AJ, Clevers H.

PLoS Biol. 2017 Feb 7;15(2):e1002596. doi: 10.1371/journal.pbio.1002596. eCollection 2017 Feb.

4.

Smyd3-associated regulatory pathways in cancer.

Giakountis A, Moulos P, Sarris ME, Hatzis P, Talianidis I.

Semin Cancer Biol. 2017 Feb;42:70-80. doi: 10.1016/j.semcancer.2016.08.008. Epub 2016 Aug 21. Review.

PMID:
27554136
5.

A Positive Regulatory Loop between a Wnt-Regulated Non-coding RNA and ASCL2 Controls Intestinal Stem Cell Fate.

Giakountis A, Moulos P, Zarkou V, Oikonomou C, Harokopos V, Hatzigeorgiou AG, Reczko M, Hatzis P.

Cell Rep. 2016 Jun 21;15(12):2588-96. doi: 10.1016/j.celrep.2016.05.038. Epub 2016 Jun 9.

6.

The E3 ligase RNF43 inhibits Wnt signaling downstream of mutated β-catenin by sequestering TCF4 to the nuclear membrane.

Loregger A, Grandl M, Mejías-Luque R, Allgäuer M, Degenhart K, Haselmann V, Oikonomou C, Hatzis P, Janssen KP, Nitsche U, Gradl D, van den Broek O, Destree O, Ulm K, Neumaier M, Kalali B, Jung A, Varela I, Schmid RM, Rad R, Busch DH, Gerhard M.

Sci Signal. 2015 Sep 8;8(393):ra90. doi: 10.1126/scisignal.aac6757.

PMID:
26350900
7.

Ascl2 acts as an R-spondin/Wnt-responsive switch to control stemness in intestinal crypts.

Schuijers J, Junker JP, Mokry M, Hatzis P, Koo BK, Sasselli V, van der Flier LG, Cuppen E, van Oudenaarden A, Clevers H.

Cell Stem Cell. 2015 Feb 5;16(2):158-70. doi: 10.1016/j.stem.2014.12.006. Epub 2015 Jan 22.

8.

Spontaneous development of hepatocellular carcinoma with cancer stem cell properties in PR-SET7-deficient livers.

Nikolaou KC, Moulos P, Chalepakis G, Hatzis P, Oda H, Reinberg D, Talianidis I.

EMBO J. 2015 Feb 12;34(4):430-47. doi: 10.15252/embj.201489279. Epub 2014 Dec 16.

9.

Systematic integration of RNA-Seq statistical algorithms for accurate detection of differential gene expression patterns.

Moulos P, Hatzis P.

Nucleic Acids Res. 2015 Feb 27;43(4):e25. doi: 10.1093/nar/gku1273. Epub 2014 Dec 1.

10.

Selection of personalized patient therapy through the use of knowledge-based computational models that identify tumor-driving signal transduction pathways.

Verhaegh W, van Ooijen H, Inda MA, Hatzis P, Versteeg R, Smid M, Martens J, Foekens J, van de Wiel P, Clevers H, van de Stolpe A.

Cancer Res. 2014 Jun 1;74(11):2936-45. doi: 10.1158/0008-5472.CAN-13-2515. Epub 2014 Apr 2.

11.

Wnt-induced transcriptional activation is exclusively mediated by TCF/LEF.

Schuijers J, Mokry M, Hatzis P, Cuppen E, Clevers H.

EMBO J. 2014 Jan 13;33(2):146-56. doi: 10.1002/embj.201385358. Epub 2014 Jan 10.

12.

Hypoxia inducible NOD2 interacts with 3-O-sulfogalactoceramide and regulates vesicular homeostasis.

Nabatov AA, Hatzis P, Rouschop KM, van Diest P, Vooijs M.

Biochim Biophys Acta. 2013 Nov;1830(11):5277-86. doi: 10.1016/j.bbagen.2013.07.017. Epub 2013 Jul 21.

PMID:
23880069
13.

Diabetes risk gene and Wnt effector Tcf7l2/TCF4 controls hepatic response to perinatal and adult metabolic demand.

Boj SF, van Es JH, Huch M, Li VS, José A, Hatzis P, Mokry M, Haegebarth A, van den Born M, Chambon P, Voshol P, Dor Y, Cuppen E, Fillat C, Clevers H.

Cell. 2012 Dec 21;151(7):1595-607. doi: 10.1016/j.cell.2012.10.053.

14.

Integrated genome-wide analysis of transcription factor occupancy, RNA polymerase II binding and steady-state RNA levels identify differentially regulated functional gene classes.

Mokry M, Hatzis P, Schuijers J, Lansu N, Ruzius FP, Clevers H, Cuppen E.

Nucleic Acids Res. 2012 Jan;40(1):148-58. doi: 10.1093/nar/gkr720. Epub 2011 Sep 13.

15.

Efficient double fragmentation ChIP-seq provides nucleotide resolution protein-DNA binding profiles.

Mokry M, Hatzis P, de Bruijn E, Koster J, Versteeg R, Schuijers J, van de Wetering M, Guryev V, Clevers H, Cuppen E.

PLoS One. 2010 Nov 30;5(11):e15092. doi: 10.1371/journal.pone.0015092.

16.

The leukemia-associated Mllt10/Af10-Dot1l are Tcf4/β-catenin coactivators essential for intestinal homeostasis.

Mahmoudi T, Boj SF, Hatzis P, Li VS, Taouatas N, Vries RG, Teunissen H, Begthel H, Korving J, Mohammed S, Heck AJ, Clevers H.

PLoS Biol. 2010 Nov 16;8(11):e1000539. doi: 10.1371/journal.pbio.1000539. Erratum in: PLoS Biol. 2017 Feb 7;15(2):e1002596.

17.

TCF4 and CDX2, major transcription factors for intestinal function, converge on the same cis-regulatory regions.

Verzi MP, Hatzis P, Sulahian R, Philips J, Schuijers J, Shin H, Freed E, Lynch JP, Dang DT, Brown M, Clevers H, Liu XS, Shivdasani RA.

Proc Natl Acad Sci U S A. 2010 Aug 24;107(34):15157-62. doi: 10.1073/pnas.1003822107. Epub 2010 Aug 9.

18.

MAP3K1 functionally interacts with Axin1 in the canonical Wnt signalling pathway.

Sue Ng S, Mahmoudi T, Li VS, Hatzis P, Boersema PJ, Mohammed S, Heck AJ, Clevers H.

Biol Chem. 2010 Feb-Mar;391(2-3):171-80. doi: 10.1515/BC.2010.028.

PMID:
20128690
19.

Transcription factor achaete scute-like 2 controls intestinal stem cell fate.

van der Flier LG, van Gijn ME, Hatzis P, Kujala P, Haegebarth A, Stange DE, Begthel H, van den Born M, Guryev V, Oving I, van Es JH, Barker N, Peters PJ, van de Wetering M, Clevers H.

Cell. 2009 Mar 6;136(5):903-12. doi: 10.1016/j.cell.2009.01.031.

20.

Cooperative synergy between NFAT and MyoD regulates myogenin expression and myogenesis.

Armand AS, Bourajjaj M, Martínez-Martínez S, el Azzouzi H, da Costa Martins PA, Hatzis P, Seidler T, Redondo JM, De Windt LJ.

J Biol Chem. 2008 Oct 24;283(43):29004-10. doi: 10.1074/jbc.M801297200. Epub 2008 Aug 1.

21.

Genome-wide pattern of TCF7L2/TCF4 chromatin occupancy in colorectal cancer cells.

Hatzis P, van der Flier LG, van Driel MA, Guryev V, Nielsen F, Denissov S, Nijman IJ, Koster J, Santo EE, Welboren W, Versteeg R, Cuppen E, van de Wetering M, Clevers H, Stunnenberg HG.

Mol Cell Biol. 2008 Apr;28(8):2732-44. doi: 10.1128/MCB.02175-07. Epub 2008 Feb 11.

23.

Plasticity and expanding complexity of the hepatic transcription factor network during liver development.

Kyrmizi I, Hatzis P, Katrakili N, Tronche F, Gonzalez FJ, Talianidis I.

Genes Dev. 2006 Aug 15;20(16):2293-305.

24.

Wnt signalling induces maturation of Paneth cells in intestinal crypts.

van Es JH, Jay P, Gregorieff A, van Gijn ME, Jonkheer S, Hatzis P, Thiele A, van den Born M, Begthel H, Brabletz T, Taketo MM, Clevers H.

Nat Cell Biol. 2005 Apr;7(4):381-6. Epub 2005 Mar 20.

PMID:
15778706
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27.

The Tup1-Cyc8 protein complex can shift from a transcriptional co-repressor to a transcriptional co-activator.

Conlan RS, Gounalaki N, Hatzis P, Tzamarias D.

J Biol Chem. 1999 Jan 1;274(1):205-10.

28.

The intracellular localization of deoxycytidine kinase.

Hatzis P, Al-Madhoon AS, Jüllig M, Petrakis TG, Eriksson S, Talianidis I.

J Biol Chem. 1998 Nov 13;273(46):30239-43.

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