Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 26

1.

Metagenomic signatures of gut infection caused by different Escherichia coli pathotypes.

Peña-Gonzalez A, Soto-Girón MJ, Smith S, Sistrunk J, Montero L, Páez M, Ortega E, Hatt JK, Cevallos W, Trueba G, Levy K, Konstantinidis KT.

Appl Environ Microbiol. 2019 Oct 4. pii: AEM.01820-19. doi: 10.1128/AEM.01820-19. [Epub ahead of print]

PMID:
31585992
2.

Predominance of deterministic microbial community dynamics in salterns exposed to different light intensities.

Viver T, Orellana LH, Díaz S, Urdiain M, Ramos-Barbero MD, González-Pastor JE, Oren A, Hatt JK, Amann R, Antón J, Konstantinidis KT, Rosselló-Móra R.

Environ Microbiol. 2019 Nov;21(11):4300-4315. doi: 10.1111/1462-2920.14790. Epub 2019 Oct 18.

PMID:
31444990
3.

Responses of tundra soil microbial communities to half a decade of experimental warming at two critical depths.

Johnston ER, Hatt JK, He Z, Wu L, Guo X, Luo Y, Schuur EAG, Tiedje JM, Zhou J, Konstantinidis KT.

Proc Natl Acad Sci U S A. 2019 Jul 23;116(30):15096-15105. doi: 10.1073/pnas.1901307116. Epub 2019 Jul 8.

PMID:
31285347
4.

Prevalence of viral photosynthesis genes along a freshwater to saltwater transect in Southeast USA.

Ruiz-Perez CA, Tsementzi D, Hatt JK, Sullivan MB, Konstantinidis KT.

Environ Microbiol Rep. 2019 Oct;11(5):672-689. doi: 10.1111/1758-2229.12780. Epub 2019 Jul 16.

PMID:
31265211
5.

Ecogenomic characterization of widespread, closely-related SAR11 clades of the freshwater genus "Candidatus Fonsibacter" and proposal of Ca. Fonsibacter lacus sp. nov.

Tsementzi D, Rodriguez-R LM, Ruiz-Perez CA, Meziti A, Hatt JK, Konstantinidis KT.

Syst Appl Microbiol. 2019 Jul;42(4):495-505. doi: 10.1016/j.syapm.2019.03.007. Epub 2019 May 6.

PMID:
31085022
6.

"Candidatus Macondimonas diazotrophica", a novel gammaproteobacterial genus dominating crude-oil-contaminated coastal sediments.

Karthikeyan S, Rodriguez-R LM, Heritier-Robbins P, Kim M, Overholt WA, Gaby JC, Hatt JK, Spain JC, Rosselló-Móra R, Huettel M, Kostka JE, Konstantinidis KT.

ISME J. 2019 Aug;13(8):2129-2134. doi: 10.1038/s41396-019-0400-5. Epub 2019 Apr 5.

PMID:
30952995
7.

imGLAD: accurate detection and quantification of target organisms in metagenomes.

Castro JC, Rodriguez-R LM, Harvey WT, Weigand MR, Hatt JK, Carter MQ, Konstantinidis KT.

PeerJ. 2018 Nov 2;6:e5882. doi: 10.7717/peerj.5882. eCollection 2018.

8.

Quantifying the changes in genetic diversity within sequence-discrete bacterial populations across a spatial and temporal riverine gradient.

Meziti A, Tsementzi D, Rodriguez-R LM, Hatt JK, Karayanni H, Kormas KA, Konstantinidis KT.

ISME J. 2019 Mar;13(3):767-779. doi: 10.1038/s41396-018-0307-6. Epub 2018 Nov 5.

PMID:
30397261
9.

Normalized Quantitative PCR Measurements as Predictors for Ethene Formation at Sites Impacted with Chlorinated Ethenes.

Clark K, Taggart DM, Baldwin BR, Ritalahti KM, Murdoch RW, Hatt JK, Löffler FE.

Environ Sci Technol. 2018 Nov 20;52(22):13410-13420. doi: 10.1021/acs.est.8b04373. Epub 2018 Nov 8.

PMID:
30365883
10.

Intensive allochthonous inputs along the Ganges River and their effect on microbial community composition and dynamics.

Zhang SY, Tsementzi D, Hatt JK, Bivins A, Khelurkar N, Brown J, Tripathi SN, Konstantinidis KT.

Environ Microbiol. 2019 Jan;21(1):182-196. doi: 10.1111/1462-2920.14439. Epub 2018 Nov 15.

PMID:
30325092
11.

Widely Used Benzalkonium Chloride Disinfectants Can Promote Antibiotic Resistance.

Kim M, Weigand MR, Oh S, Hatt JK, Krishnan R, Tezel U, Pavlostathis SG, Konstantinidis KT.

Appl Environ Microbiol. 2018 Aug 17;84(17). pii: e01201-18. doi: 10.1128/AEM.01201-18. Print 2018 Sep 1.

12.

Genomic and Transcriptomic Insights into How Bacteria Withstand High Concentrations of Benzalkonium Chloride Biocides.

Kim M, Hatt JK, Weigand MR, Krishnan R, Pavlostathis SG, Konstantinidis KT.

Appl Environ Microbiol. 2018 May 31;84(12). pii: e00197-18. doi: 10.1128/AEM.00197-18. Print 2018 Jun 15.

13.

The low diverse gastric microbiome of the jellyfish Cotylorhiza tuberculata is dominated by four novel taxa.

Viver T, Orellana LH, Hatt JK, Urdiain M, Díaz S, Richter M, Antón J, Avian M, Amann R, Konstantinidis KT, Rosselló-Móra R.

Environ Microbiol. 2017 Aug;19(8):3039-3058. doi: 10.1111/1462-2920.13763. Epub 2017 May 11.

PMID:
28419691
14.

Quantifying the Importance of the Rare Biosphere for Microbial Community Response to Organic Pollutants in a Freshwater Ecosystem.

Wang Y, Hatt JK, Tsementzi D, Rodriguez-R LM, Ruiz-Pérez CA, Weigand MR, Kizer H, Maresca G, Krishnan R, Poretsky R, Spain JC, Konstantinidis KT.

Appl Environ Microbiol. 2017 Mar 31;83(8). pii: e03321-16. doi: 10.1128/AEM.03321-16. Print 2017 Apr 15.

15.

Similar Microbial Consortia and Genes Are Involved in the Biodegradation of Benzalkonium Chlorides in Different Environments.

Ertekin E, Hatt JK, Konstantinidis KT, Tezel U.

Environ Sci Technol. 2016 Apr 19;50(8):4304-13. doi: 10.1021/acs.est.5b05959. Epub 2016 Mar 31.

PMID:
26992451
16.

Distribution of organohalide-respiring bacteria between solid and aqueous phases.

Cápiro NL, Wang Y, Hatt JK, Lebrón CA, Pennell KD, Löffler FE.

Environ Sci Technol. 2014 Sep 16;48(18):10878-87. doi: 10.1021/es501320h. Epub 2014 Aug 25.

PMID:
25105899
17.

Microbial community degradation of widely used quaternary ammonium disinfectants.

Oh S, Kurt Z, Tsementzi D, Weigand MR, Kim M, Hatt JK, Tandukar M, Pavlostathis SG, Spain JC, Konstantinidis KT.

Appl Environ Microbiol. 2014 Oct;80(19):5892-900. doi: 10.1128/AEM.01255-14. Epub 2014 Jun 20.

18.

Design and application of an internal amplification control to improve Dehalococcoides mccartyi 16S rRNA gene enumeration by qPCR.

Hatt JK, Ritalahti KM, Ogles DM, Lebrón CA, Löffler FE.

Environ Sci Technol. 2013 Oct 1;47(19):11131-8. doi: 10.1021/es4019817. Epub 2013 Sep 20.

PMID:
24053159
19.

Genomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the Geobacteraceae.

Wagner DD, Hug LA, Hatt JK, Spitzmiller MR, Padilla-Crespo E, Ritalahti KM, Edwards EA, Konstantinidis KT, Löffler FE.

BMC Genomics. 2012 May 22;13:200. doi: 10.1186/1471-2164-13-200.

20.

Quantitative real-time PCR (qPCR) detection chemistries affect enumeration of the Dehalococcoides 16S rRNA gene in groundwater.

Hatt JK, Löffler FE.

J Microbiol Methods. 2012 Feb;88(2):263-70. doi: 10.1016/j.mimet.2011.12.005. Epub 2011 Dec 19.

PMID:
22200549
21.

Comparing on-site to off-site biomass collection for Dehalococcoides biomarker gene quantification to predict in situ chlorinated ethene detoxification potential.

Ritalahti KM, Hatt JK, Lugmayr V, Henn K, Petrovskis EA, Ogles DM, Davis GA, Yeager CM, Lebrón CA, Löffler FE.

Environ Sci Technol. 2010 Jul 1;44(13):5127-33. doi: 10.1021/es100408r.

PMID:
20545341
22.

Role of bacterial biofilms in urinary tract infections.

Hatt JK, Rather PN.

Curr Top Microbiol Immunol. 2008;322:163-92. Review.

PMID:
18453276
23.

Characterization of a novel gene, wosA, regulating FlhDC expression in Proteus mirabilis.

Hatt JK, Rather PN.

J Bacteriol. 2008 Mar;190(6):1946-55. doi: 10.1128/JB.01010-07. Epub 2008 Jan 11.

25.
26.

Tryptophan super-repressors with alanine 77 changes.

Arvidson DN, Pfau J, Hatt JK, Shapiro M, Pecoraro FS, Youderian P.

J Biol Chem. 1993 Feb 25;268(6):4362-9.

Supplemental Content

Support Center