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Uncovering the reactive nature of 4-deoxy-L-erythro-5-hexoseulose uronate for the utilization of alginate, a promising marine biopolymer.

Nakata S, Murata K, Hashimoto W, Kawai S.

Sci Rep. 2019 Nov 20;9(1):17147. doi: 10.1038/s41598-019-53597-1.


Streptococcal phosphotransferase system imports unsaturated hyaluronan disaccharide derived from host extracellular matrices.

Oiki S, Nakamichi Y, Maruyama Y, Mikami B, Murata K, Hashimoto W.

PLoS One. 2019 Nov 7;14(11):e0224753. doi: 10.1371/journal.pone.0224753. eCollection 2019.


Substrate recognition by bacterial solute-binding protein is responsible for import of extracellular hyaluronan and chondroitin sulfate from the animal host.

Oiki S, Sato M, Mikami B, Murata K, Hashimoto W.

Biosci Biotechnol Biochem. 2019 Oct;83(10):1946-1954. doi: 10.1080/09168451.2019.1630250. Epub 2019 Jun 16.


Structural studies on bacterial system used in the recognition and uptake of the macromolecule alginate.

Maruyama Y, Hashimoto W, Murata K.

Biosci Biotechnol Biochem. 2019 May;83(5):794-802. doi: 10.1080/09168451.2019.1578642. Epub 2019 Feb 11. Review.


Creation of haemoglobin A1c direct oxidase from fructosyl peptide oxidase by combined structure-based site specific mutagenesis and random mutagenesis.

Ogawa N, Kimura T, Umehara F, Katayama Y, Nagai G, Suzuki K, Aisaka K, Maruyama Y, Itoh T, Hashimoto W, Murata K, Ichimura M.

Sci Rep. 2019 Jan 30;9(1):942. doi: 10.1038/s41598-018-37806-x.


Introduction of integrated dental training jaw models and rubric criteria.

Tenkumo T, Fuji T, Ikawa M, Shoji S, Sasazaki H, Iwamatsu-Kobayashi Y, Okuyama Y, Matsui H, Shiraishi N, Furuuchi T, Higuchi K, Hashimoto W, Takeuchi Y, Simauchi H, Sasaki K.

Eur J Dent Educ. 2019 Feb;23(1):e17-e31. doi: 10.1111/eje.12395. Epub 2018 Oct 11.


Sensoring a Generative System to Create User-Controlled Melodies.

Navarro-Cáceres M, Hashimoto W, Rodríguez-González S, Pérez-Lancho B, Corchado JM.

Sensors (Basel). 2018 Sep 21;18(10). pii: E3201. doi: 10.3390/s18103201.


Probiotics in human gut microbiota can degrade host glycosaminoglycans.

Kawai K, Kamochi R, Oiki S, Murata K, Hashimoto W.

Sci Rep. 2018 Jul 13;8(1):10674. doi: 10.1038/s41598-018-28886-w.


Novel Defense by Metallothionein Induction Against Cognitive Decline: From Amyloid β1-42-Induced Excess Zn2+ to Functional Zn2+ Deficiency.

Takeda A, Tamano H, Hashimoto W, Kobuchi S, Suzuki H, Murakami T, Tempaku M, Koike Y, Adlard PA, Bush AI.

Mol Neurobiol. 2018 Oct;55(10):7775-7788. doi: 10.1007/s12035-018-0948-5. Epub 2018 Feb 19.


Alternative substrate-bound conformation of bacterial solute-binding protein involved in the import of mammalian host glycosaminoglycans.

Oiki S, Kamochi R, Mikami B, Murata K, Hashimoto W.

Sci Rep. 2017 Dec 5;7(1):17005. doi: 10.1038/s41598-017-16801-8.


Binding mode of metal ions to the bacterial iron import protein EfeO.

Temtrirath K, Okumura K, Maruyama Y, Mikami B, Murata K, Hashimoto W.

Biochem Biophys Res Commun. 2017 Nov 18;493(2):1095-1101. doi: 10.1016/j.bbrc.2017.09.057. Epub 2017 Sep 14.


A solute-binding protein in the closed conformation induces ATP hydrolysis in a bacterial ATP-binding cassette transporter involved in the import of alginate.

Kaneko A, Uenishi K, Maruyama Y, Mizuno N, Baba S, Kumasaka T, Mikami B, Murata K, Hashimoto W.

J Biol Chem. 2017 Sep 22;292(38):15681-15690. doi: 10.1074/jbc.M117.793992. Epub 2017 Aug 2.


Crucial role of 4-deoxy-L-erythro-5-hexoseulose uronate reductase for alginate utilization revealed by adaptive evolution in engineered Saccharomyces cerevisiae.

Matsuoka F, Hirayama M, Kashihara T, Tanaka H, Hashimoto W, Murata K, Kawai S.

Sci Rep. 2017 Jun 23;7(1):4206. doi: 10.1038/s41598-017-04481-3.


TRAV7-2*02 Expressing CD8⁺ T Cells Are Responsible for Palladium Allergy.

Takeda Y, Suto Y, Ito K, Hashimoto W, Nishiya T, Ueda K, Narushima T, Takahashi T, Ogasawara K.

Int J Mol Sci. 2017 May 31;18(6). pii: E1162. doi: 10.3390/ijms18061162.


A bacterial ABC transporter enables import of mammalian host glycosaminoglycans.

Oiki S, Mikami B, Maruyama Y, Murata K, Hashimoto W.

Sci Rep. 2017 Apr 21;7(1):1069. doi: 10.1038/s41598-017-00917-y.


Lateral-typed flagellin responsible for formation of a polar flagellum but not of lateral flagella in Sphingomonas sp. strain A1.

Kobayashi M, Konishi H, Maruyama Y, Murata K, Hashimoto W.

Microbiology. 2016 Dec;162(12):2042-2052. doi: 10.1099/mic.0.000385.


Conformational Change in the Active Site of Streptococcal Unsaturated Glucuronyl Hydrolase Through Site-Directed Mutagenesis at Asp-115.

Nakamichi Y, Oiki S, Mikami B, Murata K, Hashimoto W.

Protein J. 2016 Aug;35(4):300-9. doi: 10.1007/s10930-016-9673-y.


Clinical evaluations of autologous fibrin glue and polyglycolic acid sheets as oral surgical wound coverings after partial glossectomy.

Kouketsu A, Nogami S, Fujiwara M, Mori S, Yamauchi K, Hashimoto W, Miyashita H, Kurihara J, Kawai T, Higuchi K, Takahashi T.

J Craniomaxillofac Surg. 2016 Aug;44(8):964-8. doi: 10.1016/j.jcms.2016.05.022. Epub 2016 Jun 7.


Structural determinants in bacterial 2-keto-3-deoxy-D-gluconate dehydrogenase KduD for dual-coenzyme specificity.

Takase R, Maruyama Y, Oiki S, Mikami B, Murata K, Hashimoto W.

Proteins. 2016 Jul;84(7):934-47. doi: 10.1002/prot.25042. Epub 2016 Apr 21.


Comparative characterization of three bacterial exo-type alginate lyases.

Hirayama M, Hashimoto W, Murata K, Kawai S.

Int J Biol Macromol. 2016 May;86:519-24. doi: 10.1016/j.ijbiomac.2016.01.095. Epub 2016 Jan 28.


Inhalation Properties and Stability of Nebulized Naked siRNA Solution for Pulmonary Therapy.

Tahara K, Hashimoto W, Takeuchi H.

Chem Pharm Bull (Tokyo). 2016;64(1):63-7.


Structure of a Bacterial ABC Transporter Involved in the Import of an Acidic Polysaccharide Alginate.

Maruyama Y, Itoh T, Kaneko A, Nishitani Y, Mikami B, Hashimoto W, Murata K.

Structure. 2015 Sep 1;23(9):1643-1654. doi: 10.1016/j.str.2015.06.021. Epub 2015 Jul 30.


Multiple crystal forms of N,N'-diacetylchitobiose deacetylase from Pyrococcus furiosus.

Nakamura T, Niiyama M, Hashimoto W, Ida K, Abe M, Morita J, Uegaki K.

Acta Crystallogr F Struct Biol Commun. 2015 Jun;71(Pt 6):657-62. doi: 10.1107/S2053230X15005695. Epub 2015 May 20.


Formation of a single polar flagellum by two distinct flagellar gene sets in Sphingomonas sp. strain A1.

Maruyama Y, Kobayashi M, Murata K, Hashimoto W.

Microbiology. 2015 Aug;161(8):1552-1560. doi: 10.1099/mic.0.000119. Epub 2015 May 26.


Production of polyhydroxybutyrate and alginate from glycerol by Azotobacter vinelandii under nitrogen-free conditions.

Yoneyama F, Yamamoto M, Hashimoto W, Murata K.

Bioengineered. 2015;6(4):209-17. doi: 10.1080/21655979.2015.1040209. Epub 2015 Apr 16.


Structural studies on Laz, a promiscuous anticancer Neisserial protein.

Hashimoto W, Ochiai A, Hong CS, Murata K, Chakrabarty AM.

Bioengineered. 2015;6(3):141-8. doi: 10.1080/21655979.2015.1022303. Epub 2015 Feb 25.


Structural insights into alginate binding by bacterial cell-surface protein.

Temtrirath K, Murata K, Hashimoto W.

Carbohydr Res. 2015 Mar 2;404:39-45. doi: 10.1016/j.carres.2014.11.008. Epub 2014 Nov 29.


Metabolic fate of unsaturated glucuronic/iduronic acids from glycosaminoglycans: molecular identification and structure determination of streptococcal isomerase and dehydrogenase.

Maruyama Y, Oiki S, Takase R, Mikami B, Murata K, Hashimoto W.

J Biol Chem. 2015 Mar 6;290(10):6281-92. doi: 10.1074/jbc.M114.604546. Epub 2015 Jan 20.


Structure-based conversion of the coenzyme requirement of a short-chain dehydrogenase/reductase involved in bacterial alginate metabolism.

Takase R, Mikami B, Kawai S, Murata K, Hashimoto W.

J Biol Chem. 2014 Nov 28;289(48):33198-214. doi: 10.1074/jbc.M114.585661. Epub 2014 Oct 6.


Alginate-dependent gene expression mechanism in Sphingomonas sp. strain A1.

Hayashi C, Takase R, Momma K, Maruyama Y, Murata K, Hashimoto W.

J Bacteriol. 2014 Jul;196(14):2691-700. doi: 10.1128/JB.01666-14. Epub 2014 May 9.


Expression from engineered Escherichia coli chromosome and crystallographic study of archaeal N,N'-diacetylchitobiose deacetylase.

Mine S, Niiyama M, Hashimoto W, Ikegami T, Koma D, Ohmoto T, Fukuda Y, Inoue T, Abe Y, Ueda T, Morita J, Uegaki K, Nakamura T.

FEBS J. 2014 Jun;281(11):2584-96. doi: 10.1111/febs.12805. Epub 2014 Apr 28.


Are octogenarians in good condition after cardiac valvular surgery?

Sumi M, Ariyoshi T, Miura T, Hashimoto W, Hashizume K, Matsukuma S, Eishi K.

Ann Thorac Cardiovasc Surg. 2014;20(6):1021-5. doi: 10.5761/atcs.oa.13-00241. Epub 2014 Feb 4.


Crystal structure of Pedobacter heparinus heparin lyase Hep III with the active site in a deep cleft.

Hashimoto W, Maruyama Y, Nakamichi Y, Mikami B, Murata K.

Biochemistry. 2014 Feb 4;53(4):777-86. doi: 10.1021/bi4012463. Epub 2014 Jan 27.


Crystal structure of a bacterial unsaturated glucuronyl hydrolase with specificity for heparin.

Nakamichi Y, Mikami B, Murata K, Hashimoto W.

J Biol Chem. 2014 Feb 21;289(8):4787-97. doi: 10.1074/jbc.M113.522573. Epub 2014 Jan 8.


A novel bleb-dependent polysaccharide export system in nitrogen-fixing Azotobacter vinelandii subjected to low nitrogen gas levels.

Hashimoto W, Miyamoto Y, Yamamoto M, Yoneyama F, Murata K.

Int Microbiol. 2013 Mar;16(1):35-44.


Pharmacokinetics of linezolid in the mediastinum and pleural space.

Tsuji Y, Hashimoto W, Taniguchi S, Hiraki Y, Mizoguchi A, Yukawa E, To H.

Int J Infect Dis. 2013 Nov;17(11):e1060-1. doi: 10.1016/j.ijid.2013.03.008. Epub 2013 May 16.


Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III.

Mikami B, Ban M, Suzuki S, Yoon HJ, Miyake O, Yamasaki M, Ogura K, Maruyama Y, Hashimoto W, Murata K.

Acta Crystallogr D Biol Crystallogr. 2012 Sep;68(Pt 9):1207-16. doi: 10.1107/S090744491202495X. Epub 2012 Aug 18.


Recognition of heteropolysaccharide alginate by periplasmic solute-binding proteins of a bacterial ABC transporter.

Nishitani Y, Maruyama Y, Itoh T, Mikami B, Hashimoto W, Murata K.

Biochemistry. 2012 May 1;51(17):3622-33. doi: 10.1021/bi300194f. Epub 2012 Apr 23.


Survival and quality of life of octogenarians who underwent mechanical valve replacement at a younger age.

Hashimoto W, Tanigawa K, Hashizume K, Ariyoshi T, Taniguchi S, Izumi K, Miura T, Nakaji S, Onohara D, Eishi K.

Gen Thorac Cardiovasc Surg. 2012 Apr;60(4):213-6. doi: 10.1007/s11748-011-0866-1. Epub 2012 Mar 28.


Crystallization and preliminary X-ray analysis of alginate importer from Sphingomonas sp. A1.

Maruyama Y, Itoh T, Nishitani Y, Mikami B, Hashimoto W, Murata K.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Mar 1;68(Pt 3):317-20. doi: 10.1107/S1744309112001893. Epub 2012 Feb 23.


Systolic anterior motion after mitral valve repair: predicting factors and management.

Miura T, Eishi K, Yamachika S, Hashizume K, Hazama S, Ariyoshi T, Taniguchi S, Izumi K, Hashimoto W, Odate T.

Gen Thorac Cardiovasc Surg. 2011 Nov;59(11):737-42. doi: 10.1007/s11748-011-0833-x. Epub 2011 Nov 15.


Azotobacter vinelandii gene clusters for two types of peptidic and catechol siderophores produced in response to molybdenum.

Yoneyama F, Yamamoto M, Hashimoto W, Murata K.

J Appl Microbiol. 2011 Oct;111(4):932-8. doi: 10.1111/j.1365-2672.2011.05109.x. Epub 2011 Aug 11.


Transformation of Saccharomyces cerevisiae and other fungi: methods and possible underlying mechanism.

Kawai S, Hashimoto W, Murata K.

Bioeng Bugs. 2010 Nov-Dec;1(6):395-403. doi: 10.4161/bbug.1.6.13257. Review.


Primary cardiac osteosarcoma with imaging that revealed no calcification.

Hashimoto W, Hashizume K, Ariyoshi T, Taniguchi S, Miura T, Kinoshita N, Eishi K.

Gen Thorac Cardiovasc Surg. 2011 Mar;59(3):184-6. doi: 10.1007/s11748-010-0656-1. Epub 2011 Mar 30.


Bacterial supersystem for alginate import/metabolism and its environmental and bioenergy applications.

Hashimoto W, Kawai S, Murata K.

Bioeng Bugs. 2010 Mar-Apr;1(2):97-109. doi: 10.4161/bbug.1.2.10322. Epub 2009 Oct 14. Review.


Heterosubunit composition and crystal structures of a novel bacterial M16B metallopeptidase.

Maruyama Y, Chuma A, Mikami B, Hashimoto W, Murata K.

J Mol Biol. 2011 Mar 18;407(1):180-92. doi: 10.1016/j.jmb.2011.01.038. Epub 2011 Jan 22.


Crystal structure of bacterial cell-surface alginate-binding protein with an M75 peptidase motif.

Maruyama Y, Ochiai A, Mikami B, Hashimoto W, Murata K.

Biochem Biophys Res Commun. 2011 Feb 18;405(3):411-6. doi: 10.1016/j.bbrc.2011.01.043. Epub 2011 Jan 14.


Ten years experience of aortic root replacement using a modified bentall procedure with a carrel patch and inclusion technique.

Hashimoto W, Hashizume K, Ariyoshi T, Taniguchi S, Miura T, Odate T, Matsukuma S, Hisatomi K, Eishi K.

Ann Vasc Dis. 2011;4(1):32-6. doi: 10.3400/avd.oa.10.00011. Epub 2011 Feb 17.


Structural determinants in streptococcal unsaturated glucuronyl hydrolase for recognition of glycosaminoglycan sulfate groups.

Nakamichi Y, Maruyama Y, Mikami B, Hashimoto W, Murata K.

J Biol Chem. 2011 Feb 25;286(8):6262-71. doi: 10.1074/jbc.M110.182618. Epub 2010 Dec 8.


Double patch technique for closing acute ventricular septal perforation.

Hisatomi K, Eishi K, Hamawaki M, Hashizume K, Hazama S, Ariyoshi T, Taniguchi S, Miura T, Hashimoto W, Matsukuma S.

Gen Thorac Cardiovasc Surg. 2010 Nov;58(11):555-60. doi: 10.1007/s11748-010-0632-9. Epub 2010 Nov 11.


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