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Mobilizable antibiotic resistance genes are present in dust microbial communities.

Ben Maamar S, Glawe AJ, Brown TK, Hellgeth N, Hu J, Wang JP, Huttenhower C, Hartmann EM.

PLoS Pathog. 2020 Jan 23;16(1):e1008211. doi: 10.1371/journal.ppat.1008211. eCollection 2020 Jan.


Implications of indoor microbial ecology and evolution on antibiotic resistance.

Ben Maamar S, Hu J, Hartmann EM.

J Expo Sci Environ Epidemiol. 2020 Jan;30(1):1-15. doi: 10.1038/s41370-019-0171-0. Epub 2019 Oct 7. Review.


From one species to another: A review on the interaction between chemistry and microbiology in relation to cleaning in the built environment.

Velazquez S, Griffiths W, Dietz L, Horve P, Nunez S, Hu J, Shen J, Fretz M, Bi C, Xu Y, Van Den Wymelenberg KG, Hartmann EM, Ishaq SL.

Indoor Air. 2019 Nov;29(6):880-894. doi: 10.1111/ina.12596. Epub 2019 Sep 6. Review.


Viral composition and context in metagenomes from biofilm and suspended growth municipal wastewater treatment plants.

Petrovich ML, Ben Maamar S, Hartmann EM, Murphy BT, Poretsky RS, Wells GF.

Microb Biotechnol. 2019 Nov;12(6):1324-1336. doi: 10.1111/1751-7915.13464. Epub 2019 Aug 14.


Same same but different? Modeling N-1 switch cost and N-2 repetition cost with the diffusion model and the linear ballistic accumulator model.

Hartmann EM, Rey-Mermet A, Gade M.

Acta Psychol (Amst). 2019 Jul;198:102858. doi: 10.1016/j.actpsy.2019.05.010. Epub 2019 Jul 2.


Microbial and metabolic succession on common building materials under high humidity conditions.

Lax S, Cardona C, Zhao D, Winton VJ, Goodney G, Gao P, Gottel N, Hartmann EM, Henry C, Thomas PM, Kelley ST, Stephens B, Gilbert JA.

Nat Commun. 2019 Apr 16;10(1):1767. doi: 10.1038/s41467-019-09764-z.


Impacts of indoor surface finishes on bacterial viability.

Hu J, Ben Maamar S, Glawe AJ, Gottel N, Gilbert JA, Hartmann EM.

Indoor Air. 2019 Jul;29(4):551-562. doi: 10.1111/ina.12558. Epub 2019 May 13.


Pangenomic Approach To Understanding Microbial Adaptations within a Model Built Environment, the International Space Station, Relative to Human Hosts and Soil.

Blaustein RA, McFarland AG, Ben Maamar S, Lopez A, Castro-Wallace S, Hartmann EM.

mSystems. 2019 Jan 8;4(1). pii: e00281-18. doi: 10.1128/mSystems.00281-18. eCollection 2019 Jan-Feb.


Antimicrobial Chemicals Associate with Microbial Function and Antibiotic Resistance Indoors.

Fahimipour AK, Ben Mamaar S, McFarland AG, Blaustein RA, Chen J, Glawe AJ, Kline J, Green JL, Halden RU, Van Den Wymelenberg K, Huttenhower C, Hartmann EM.

mSystems. 2018 Dec 11;3(6). pii: e00200-18. doi: 10.1128/mSystems.00200-18. eCollection 2018 Nov-Dec.


Daylight exposure modulates bacterial communities associated with household dust.

Fahimipour AK, Hartmann EM, Siemens A, Kline J, Levin DA, Wilson H, Betancourt-Román CM, Brown GZ, Fretz M, Northcutt D, Siemens KN, Huttenhower C, Green JL, Van Den Wymelenberg K.

Microbiome. 2018 Oct 18;6(1):175. doi: 10.1186/s40168-018-0559-4.


Assessment of human exposure to triclocarban, triclosan and five parabens in U.S. indoor dust using dispersive solid phase extraction followed by liquid chromatography tandem mass spectrometry.

Chen J, Hartmann EM, Kline J, Van Den Wymelenberg K, Halden RU.

J Hazard Mater. 2018 Oct 15;360:623-630. doi: 10.1016/j.jhazmat.2018.08.014. Epub 2018 Aug 16.


Alterations in oral bacterial communities are associated with risk factors for oral and oropharyngeal cancer.

Börnigen D, Ren B, Pickard R, Li J, Ozer E, Hartmann EM, Xiao W, Tickle T, Rider J, Gevers D, Franzosa EA, Davey ME, Gillison ML, Huttenhower C.

Sci Rep. 2017 Dec 15;7(1):17686. doi: 10.1038/s41598-017-17795-z.


Schrödinger's microbes: Tools for distinguishing the living from the dead in microbial ecosystems.

Emerson JB, Adams RI, Román CMB, Brooks B, Coil DA, Dahlhausen K, Ganz HH, Hartmann EM, Hsu T, Justice NB, Paulino-Lima IG, Luongo JC, Lymperopoulou DS, Gomez-Silvan C, Rothschild-Mancinelli B, Balk M, Huttenhower C, Nocker A, Vaishampayan P, Rothschild LJ.

Microbiome. 2017 Aug 16;5(1):86. doi: 10.1186/s40168-017-0285-3. Review.


Urban Transit System Microbial Communities Differ by Surface Type and Interaction with Humans and the Environment.

Hsu T, Joice R, Vallarino J, Abu-Ali G, Hartmann EM, Shafquat A, DuLong C, Baranowski C, Gevers D, Green JL, Morgan XC, Spengler JD, Huttenhower C.

mSystems. 2016 Jun 28;1(3). pii: e00018-16. eCollection 2016 May-Jun.


Antimicrobial Chemicals Are Associated with Elevated Antibiotic Resistance Genes in the Indoor Dust Microbiome.

Hartmann EM, Hickey R, Hsu T, Betancourt Román CM, Chen J, Schwager R, Kline J, Brown GZ, Halden RU, Huttenhower C, Green JL.

Environ Sci Technol. 2016 Sep 20;50(18):9807-15. doi: 10.1021/acs.est.6b00262. Epub 2016 Sep 7.


CCL3 chemokine expression by chronic lymphocytic leukemia cells orchestrates the composition of the microenvironment in lymph node infiltrates.

Hartmann EM, Rudelius M, Burger JA, Rosenwald A.

Leuk Lymphoma. 2016;57(3):563-71. doi: 10.3109/10428194.2015.1068308. Epub 2015 Oct 12.


Recent advances in proteomics applied to elucidate the role of environmental impacts on human health and organismal function.

Halden RU, Hartmann EM, Denslow ND, Haynes PA, LaBaer J.

J Proteome Res. 2015 Jan 2;14(1):1-4. doi: 10.1021/pr501224f. No abstract available.


Absolute quantification of norovirus capsid protein in food, water, and soil using synthetic peptides with electrospray and MALDI mass spectrometry.

Hartmann EM, Colquhoun DR, Schwab KJ, Halden RU.

J Hazard Mater. 2015 Apr 9;286:525-32. doi: 10.1016/j.jhazmat.2014.12.055. Epub 2015 Jan 5.


Taking the shortcut for high-throughput shotgun proteomic analysis of bacteria.

Hartmann EM, Allain F, Gaillard JC, Pible O, Armengaud J.

Methods Mol Biol. 2014;1197:275-85. doi: 10.1007/978-1-4939-1261-2_16.


N-terminomics and proteogenomics, getting off to a good start.

Hartmann EM, Armengaud J.

Proteomics. 2014 Dec;14(23-24):2637-46. doi: 10.1002/pmic.201400157. Epub 2014 Sep 23. Review.


[Swelling in the left medial angle of the eyelid in a 42-year-old woman].

Hartung B, Freiberg FJ, Hartmann EM, Klink T.

Ophthalmologe. 2014 Jun;111(6):568-71. doi: 10.1007/s00347-013-2969-9. German. No abstract available.


Gender differences in itch and pain-related sensations provoked by histamine, cowhage and capsaicin.

Hartmann EM, Handwerker HO, Forster C.

Acta Derm Venereol. 2015 Jan;95(1):25-30. doi: 10.2340/00015555-1894.


Proteomics meets blue biotechnology: a wealth of novelties and opportunities.

Hartmann EM, Durighello E, Pible O, Nogales B, Beltrametti F, Bosch R, Christie-Oleza JA, Armengaud J.

Mar Genomics. 2014 Oct;17:35-42. doi: 10.1016/j.margen.2014.04.003. Epub 2014 Apr 26. Review.


N-Terminal-oriented proteogenomics of the marine bacterium roseobacter denitrificans Och114 using N-Succinimidyloxycarbonylmethyl)tris(2,4,6-trimethoxyphenyl)phosphonium bromide (TMPP) labeling and diagonal chromatography.

Bland C, Hartmann EM, Christie-Oleza JA, Fernandez B, Armengaud J.

Mol Cell Proteomics. 2014 May;13(5):1369-81. doi: 10.1074/mcp.O113.032854. Epub 2014 Feb 16.


Non-model organisms, a species endangered by proteogenomics.

Armengaud J, Trapp J, Pible O, Geffard O, Chaumot A, Hartmann EM.

J Proteomics. 2014 Jun 13;105:5-18. doi: 10.1016/j.jprot.2014.01.007. Epub 2014 Jan 16. Review.


Landscape of somatic mutations and clonal evolution in mantle cell lymphoma.

Beà S, Valdés-Mas R, Navarro A, Salaverria I, Martín-Garcia D, Jares P, Giné E, Pinyol M, Royo C, Nadeu F, Conde L, Juan M, Clot G, Vizán P, Di Croce L, Puente DA, López-Guerra M, Moros A, Roue G, Aymerich M, Villamor N, Colomo L, Martínez A, Valera A, Martín-Subero JI, Amador V, Hernández L, Rozman M, Enjuanes A, Forcada P, Muntañola A, Hartmann EM, Calasanz MJ, Rosenwald A, Ott G, Hernández-Rivas JM, Klapper W, Siebert R, Wiestner A, Wilson WH, Colomer D, López-Guillermo A, López-Otín C, Puente XS, Campo E.

Proc Natl Acad Sci U S A. 2013 Nov 5;110(45):18250-5. doi: 10.1073/pnas.1314608110. Epub 2013 Oct 21.


Shotgun proteomics suggests involvement of additional enzymes in dioxin degradation by Sphingomonas wittichii RW1.

Hartmann EM, Armengaud J.

Environ Microbiol. 2014 Jan;16(1):162-76. doi: 10.1111/1462-2920.12264. Epub 2013 Sep 30.


Proteogenomics for environmental microbiology.

Armengaud J, Hartmann EM, Bland C.

Proteomics. 2013 Oct;13(18-19):2731-42. doi: 10.1002/pmic.201200576. Epub 2013 Jun 18. Review.


Natalizumab exerts direct signaling capacity and supports a pro-inflammatory phenotype in some patients with multiple sclerosis.

Benkert TF, Dietz L, Hartmann EM, Leich E, Rosenwald A, Serfling E, Buttmann M, Berberich-Siebelt F.

PLoS One. 2012;7(12):e52208. doi: 10.1371/journal.pone.0052208. Epub 2012 Dec 20.


CCND2 rearrangements are the most frequent genetic events in cyclin D1(-) mantle cell lymphoma.

Salaverria I, Royo C, Carvajal-Cuenca A, Clot G, Navarro A, Valera A, Song JY, Woroniecka R, Rymkiewicz G, Klapper W, Hartmann EM, Sujobert P, Wlodarska I, Ferry JA, Gaulard P, Ott G, Rosenwald A, Lopez-Guillermo A, Quintanilla-Martinez L, Harris NL, Jaffe ES, Siebert R, Campo E, Beà S.

Blood. 2013 Feb 21;121(8):1394-402. doi: 10.1182/blood-2012-08-452284. Epub 2012 Dec 18.


Proteomic profiling of the dioxin-degrading bacterium Sphingomonas wittichii RW1.

Colquhoun DR, Hartmann EM, Halden RU.

J Biomed Biotechnol. 2012;2012:408690. doi: 10.1155/2012/408690. Epub 2012 Oct 2.


Patient-centered evaluation of outcomes from rehabilitation for chronic disabling spinal disorders: the impact of personal goal achievement on patient satisfaction.

Hazard RG, Spratt KF, McDonough CM, Olson CM, Ossen ES, Hartmann EM, Carlson RJ, LaVoie J.

Spine J. 2012 Dec;12(12):1132-7. doi: 10.1016/j.spinee.2012.09.003. Epub 2012 Oct 12.


Increased tumor cell proliferation in mantle cell lymphoma is associated with elevated insulin-like growth factor 2 mRNA-binding protein 3 expression.

Hartmann EM, Beà S, Navarro A, Trapp V, Campo E, Ott G, Rosenwald A.

Mod Pathol. 2012 Sep;25(9):1227-35. doi: 10.1038/modpathol.2012.84. Epub 2012 May 4.


Analytical methods for the detection of viruses in food by example of CCL-3 bioagents.

Hartmann EM, Halden RU.

Anal Bioanal Chem. 2012 Nov;404(9):2527-37. doi: 10.1007/s00216-012-5974-y. Epub 2012 Apr 24. Review.


Quantitative PCR for tracking the megaplasmid-borne biodegradation potential of a model sphingomonad.

Hartmann EM, Badalamenti JP, Krajmalnik-Brown R, Halden RU.

Appl Environ Microbiol. 2012 Jun;78(12):4493-6. doi: 10.1128/AEM.00715-12. Epub 2012 Apr 6.


Non-nodal type of mantle cell lymphoma is a specific biological and clinical subgroup of the disease.

Royo C, Navarro A, Clot G, Salaverria I, Giné E, Jares P, Colomer D, Wiestner A, Wilson WH, Vegliante MC, Fernandez V, Hartmann EM, Trim N, Erber WN, Swerdlow SH, Klapper W, Dyer MJ, Vargas-Pabón M, Ott G, Rosenwald A, Siebert R, López-Guillermo A, Campo E, Beà S.

Leukemia. 2012 Aug;26(8):1895-8. doi: 10.1038/leu.2012.72. Epub 2012 Mar 19. No abstract available.


The complex landscape of genetic alterations in mantle cell lymphoma.

Royo C, Salaverria I, Hartmann EM, Rosenwald A, Campo E, Beà S.

Semin Cancer Biol. 2011 Nov;21(5):322-34. doi: 10.1016/j.semcancer.2011.09.007. Epub 2011 Sep 18. Review.


Epigenetic regulation of CD44 in Hodgkin and non-Hodgkin lymphoma.

Eberth S, Schneider B, Rosenwald A, Hartmann EM, Romani J, Zaborski M, Siebert R, Drexler HG, Quentmeier H.

BMC Cancer. 2010 Sep 29;10:517. doi: 10.1186/1471-2407-10-517.


Pathway discovery in mantle cell lymphoma by integrated analysis of high-resolution gene expression and copy number profiling.

Hartmann EM, Campo E, Wright G, Lenz G, Salaverria I, Jares P, Xiao W, Braziel RM, Rimsza LM, Chan WC, Weisenburger DD, Delabie J, Jaffe ES, Gascoyne RD, Dave SS, Mueller-Hermelink HK, Staudt LM, Ott G, Beà S, Rosenwald A.

Blood. 2010 Aug 12;116(6):953-61. doi: 10.1182/blood-2010-01-263806. Epub 2010 Apr 26.


Gene expression signatures of adult T-cell leukemia: is treatment response prediction on the horizon?

Hartmann EM, Rosenwald A.

Leuk Lymphoma. 2010 Jul;51(7):1157-8. doi: 10.3109/10428194.2010.481066. No abstract available.


Investigation of glycemia recovery with oral administration of glycerol, pyruvate, and L-lactate during long-term, insulin-induced hypoglycemia.

Hartmann EM, Garcia RF, Gazola VA, Barrena HC, Bazotte RB.

J Diabetes Complications. 2010 Sep-Oct;24(5):301-5. doi: 10.1016/j.jdiacomp.2009.07.003. Epub 2009 Sep 11.


Follicular lymphomas with and without translocation t(14;18) differ in gene expression profiles and genetic alterations.

Leich E, Salaverria I, Bea S, Zettl A, Wright G, Moreno V, Gascoyne RD, Chan WC, Braziel RM, Rimsza LM, Weisenburger DD, Delabie J, Jaffe ES, Lister A, Fitzgibbon J, Staudt LM, Hartmann EM, Mueller-Hermelink HK, Campo E, Ott G, Rosenwald A.

Blood. 2009 Jul 23;114(4):826-34. doi: 10.1182/blood-2009-01-198580. Epub 2009 May 26.


Molecular outcome prediction in mantle cell lymphoma.

Hartmann EM, Ott G, Rosenwald A.

Future Oncol. 2009 Feb;5(1):63-73. doi: 10.2217/14796694.5.1.63. Review.


Virtual lab demonstrations improve students' mastery of basic biology laboratory techniques.

Maldarelli GA, Hartmann EM, Cummings PJ, Horner RD, Obom KM, Shingles R, Pearlman RS.

J Microbiol Biol Educ. 2009 Dec 17;10(1):51-7. Print 2009.


Uniparental disomies, homozygous deletions, amplifications, and target genes in mantle cell lymphoma revealed by integrative high-resolution whole-genome profiling.

Beà S, Salaverria I, Armengol L, Pinyol M, Fernández V, Hartmann EM, Jares P, Amador V, Hernández L, Navarro A, Ott G, Rosenwald A, Estivill X, Campo E.

Blood. 2009 Mar 26;113(13):3059-69. doi: 10.1182/blood-2008-07-170183. Epub 2008 Nov 4.


Molecular biology and genetics of lymphomas.

Hartmann EM, Ott G, Rosenwald A.

Hematol Oncol Clin North Am. 2008 Oct;22(5):807-23, vii. doi: 10.1016/j.hoc.2008.07.004. Review.


Chromosomal alterations detected by comparative genomic hybridization in subgroups of gene expression-defined Burkitt's lymphoma.

Salaverria I, Zettl A, Beà S, Hartmann EM, Dave SS, Wright GW, Boerma EJ, Kluin PM, Ott G, Chan WC, Weisenburger DD, Lopez-Guillermo A, Gascoyne RD, Delabie J, Rimsza LM, Braziel RM, Jaffe ES, Staudt LM, Müller-Hermelink HK, Campo E, Rosenwald A; Leukemia and Lymphoma Molecular Profiling Project (LLMPP).

Haematologica. 2008 Sep;93(9):1327-34. doi: 10.3324/haematol.13071. Epub 2008 Aug 12.


Chronic lymphocytic leukemia with mutated IgVH1-69 usage: a distinct CLL subgroup with more indolent behavior?

Hartmann EM, Rosenwald A.

Leuk Lymphoma. 2008 Apr;49(4):648-9. doi: 10.1080/10428190801959059. Review. No abstract available.


Diagnostic and prognostic significance of gene expression profiling in lymphomas.

Leich E, Hartmann EM, Burek C, Ott G, Rosenwald A.

APMIS. 2007 Oct;115(10):1135-46. Review.


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