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Items: 1 to 50 of 267

1.

Reward prediction tells us less than expected about musical pleasure.

de Fleurian R, Harrison PMC, Pearce MT, Quiroga-Martinez DR.

Proc Natl Acad Sci U S A. 2019 Oct 15;116(42):20813-20814. doi: 10.1073/pnas.1913244116. Epub 2019 Sep 19. No abstract available.

PMID:
31537748
2.

Compositionally Biased Dark Matter in the Protein Universe.

Harrison PM.

Proteomics. 2019 Aug;19(15):e1970134. doi: 10.1002/pmic.201970134. No abstract available.

PMID:
31368634
3.

Conservation of Prion-Like Composition and Sequence in Prion-Formers and Prion-Like Proteins of Saccharomyces cerevisiae.

Su TY, Harrison PM.

Front Mol Biosci. 2019 Jul 11;6:54. doi: 10.3389/fmolb.2019.00054. eCollection 2019.

4.

The mistuning perception test: A new measurement instrument.

Larrouy-Maestri P, Harrison PMC, Müllensiefen D.

Behav Res Methods. 2019 Apr;51(2):663-675. doi: 10.3758/s13428-019-01225-1.

5.

Evolutionary behaviour of bacterial prion-like proteins.

Harrison PM.

PLoS One. 2019 Mar 5;14(3):e0213030. doi: 10.1371/journal.pone.0213030. eCollection 2019.

6.

Compositionally Biased Dark Matter in the Protein Universe.

Harrison PM.

Proteomics. 2018 Nov;18(21-22):e1800069. doi: 10.1002/pmic.201800069. Epub 2018 Oct 29. Erratum in: Proteomics. 2019 Aug;19(15):e1970134.

PMID:
30260558
7.

Development and Validation of the Computerised Adaptive Beat Alignment Test (CA-BAT).

Harrison PMC, Müllensiefen D.

Sci Rep. 2018 Aug 17;8(1):12395. doi: 10.1038/s41598-018-30318-8.

8.

Discerning evolutionary trends in post-translational modification and the effect of intrinsic disorder: Analysis of methylation, acetylation and ubiquitination sites in human proteins.

Narasumani M, Harrison PM.

PLoS Comput Biol. 2018 Aug 10;14(8):e1006349. doi: 10.1371/journal.pcbi.1006349. eCollection 2018 Aug.

9.

Estimating the occurrence of primary ubiquinone deficiency by analysis of large-scale sequencing data.

Hughes BG, Harrison PM, Hekimi S.

Sci Rep. 2017 Dec 18;7(1):17744. doi: 10.1038/s41598-017-17564-y.

10.

fLPS: Fast discovery of compositional biases for the protein universe.

Harrison PM.

BMC Bioinformatics. 2017 Nov 13;18(1):476. doi: 10.1186/s12859-017-1906-3.

11.

Partial diel migration: A facultative migration underpinned by long-term inter-individual variation.

Harrison PM, Gutowsky LFG, Martins EG, Patterson DA, Cooke SJ, Power M.

J Anim Ecol. 2017 Sep;86(5):1246-1256. doi: 10.1111/1365-2656.12716. Epub 2017 Jul 20.

PMID:
28727138
12.
13.

Individual isotopic specializations predict subsequent inter-individual variation in movement in a freshwater fish.

Harrison PM, Gutowsky LF, Martins EG, Ward TD, Patterson DA, Cooke SJ, Power M.

Ecology. 2017 Mar;98(3):608-615. doi: 10.1002/ecy.1681.

PMID:
27984657
14.

The evolutionary scope and neurological disease linkage of yeast-prion-like proteins in humans.

An L, Harrison PM.

Biol Direct. 2016 Jul 26;11:32. doi: 10.1186/s13062-016-0134-5.

15.

Temporal plasticity in thermal-habitat selection of burbot Lota lota a diel-migrating winter-specialist.

Harrison PM, Gutowsky LF, Martins EG, Patterson DA, Cooke SJ, Power M.

J Fish Biol. 2016 Jun;88(6):2111-29. doi: 10.1111/jfb.12990. Epub 2016 Apr 29.

PMID:
27125426
16.

Controversies in the management of primary sclerosing cholangitis.

Nayagam JS, Pereira SP, Devlin J, Harrison PM, Joshi D.

World J Hepatol. 2016 Feb 18;8(5):265-72. doi: 10.4254/wjh.v8.i5.265. Review.

17.

Intracellular soluble α-synuclein oligomers reduce pyramidal cell excitability.

Kaufmann TJ, Harrison PM, Richardson MJ, Pinheiro TJ, Wall MJ.

J Physiol. 2016 May 15;594(10):2751-72. doi: 10.1113/JP271968. Epub 2016 Mar 24.

18.

Emergence and evolution of yeast prion and prion-like proteins.

An L, Fitzpatrick D, Harrison PM.

BMC Evol Biol. 2016 Jan 25;16:24. doi: 10.1186/s12862-016-0594-3.

19.

Synthetic cycle of the initiation module of a formylating nonribosomal peptide synthetase.

Reimer JM, Aloise MN, Harrison PM, Schmeing TM.

Nature. 2016 Jan 14;529(7585):239-42. doi: 10.1038/nature16503.

PMID:
26762462
20.
21.

Experimentally Verified Parameter Sets for Modelling Heterogeneous Neocortical Pyramidal-Cell Populations.

Harrison PM, Badel L, Wall MJ, Richardson MJ.

PLoS Comput Biol. 2015 Aug 20;11(8):e1004165. doi: 10.1371/journal.pcbi.1004165. eCollection 2015 Aug.

22.

The combined molecular adjuvant CASAC enhances the CD8+ T cell response to a tumor-associated self-antigen in aged, immunosenescent mice.

Tye GJ, Ioannou K, Amofah E, Quartey-Papafio R, Westrop SJ, Krishnamurthy P, Noble A, Harrison PM, Gaensler KML, Barber LD, Farzaneh F.

Immun Ageing. 2015 Jun 25;12:6. doi: 10.1186/s12979-015-0033-0. eCollection 2015.

23.

The distribution and evolution of Arabidopsis thaliana cis natural antisense transcripts.

Bouchard J, Oliver C, Harrison PM.

BMC Genomics. 2015 Jun 9;16:444. doi: 10.1186/s12864-015-1587-0.

24.

Management of patients with decompensated cirrhosis.

Harrison PM.

Clin Med (Lond). 2015 Apr;15(2):201-3. doi: 10.7861/clinmedicine.15-2-201.

25.

Interaction networks of prion, prionogenic and prion-like proteins in budding yeast, and their role in gene regulation.

Harbi D, Harrison PM.

PLoS One. 2014 Jun 27;9(6):e100615. doi: 10.1371/journal.pone.0100615. eCollection 2014.

26.

Computational methods for pseudogene annotation based on sequence homology.

Harrison PM.

Methods Mol Biol. 2014;1167:27-39. doi: 10.1007/978-1-4939-0835-6_3.

PMID:
24823769
27.

Comparison of scoring systems and outcome of patients admitted to a liver intensive care unit of a tertiary referral centre with severe variceal bleeding.

Al-Freah MA, Gera A, Martini S, McPhail MJ, Devlin J, Harrison PM, Shawcross D, Abeles RD, Taylor NJ, Auzinger G, Bernal W, Heneghan MA, Wendon JA.

Aliment Pharmacol Ther. 2014 Jun;39(11):1286-300. doi: 10.1111/apt.12744. Epub 2014 Apr 16.

28.

Classifying prion and prion-like phenomena.

Harbi D, Harrison PM.

Prion. 2014 Mar-Apr;8(2). pii: 27960. Epub 2014 Feb 18.

29.

An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions.

Haudry A, Platts AE, Vello E, Hoen DR, Leclercq M, Williamson RJ, Forczek E, Joly-Lopez Z, Steffen JG, Hazzouri KM, Dewar K, Stinchcombe JR, Schoen DJ, Wang X, Schmutz J, Town CD, Edger PP, Pires JC, Schumaker KS, Jarvis DE, Mandáková T, Lysak MA, van den Bergh E, Schranz ME, Harrison PM, Moses AM, Bureau TE, Wright SI, Blanchette M.

Nat Genet. 2013 Aug;45(8):891-8. doi: 10.1038/ng.2684. Epub 2013 Jun 30.

PMID:
23817568
30.

The landscape of the prion protein's structural response to mutation revealed by principal component analysis of multiple NMR ensembles.

Gendoo DM, Harrison PM.

PLoS Comput Biol. 2012;8(8):e1002646. doi: 10.1371/journal.pcbi.1002646. Epub 2012 Aug 9.

31.

Development and validation of an efficient in-house real-time reverse transcription polymerase chain reaction assay for the quantitative detection of serum hepatitis delta virus RNA in a diverse South London population.

Shang D, Hughes SA, Horner M, Bruce MJ, Dong Y, Carey I, Suddle AR, Agarwal K, Harrison PM, Atkins M.

J Virol Methods. 2012 Sep;184(1-2):55-62. doi: 10.1016/j.jviromet.2012.05.008. Epub 2012 May 18.

PMID:
22613674
32.

Pancreatic pseudocysts in children: treatment by endoscopic cyst gastrostomy.

Makin E, Harrison PM, Patel S, Davenport M.

J Pediatr Gastroenterol Nutr. 2012 Nov;55(5):556-8. doi: 10.1097/MPG.0b013e3182574fc9.

PMID:
22465934
33.

PrionHome: a database of prions and other sequences relevant to prion phenomena.

Harbi D, Parthiban M, Gendoo DM, Ehsani S, Kumar M, Schmitt-Ulms G, Sowdhamini R, Harrison PM.

PLoS One. 2012;7(2):e31785. doi: 10.1371/journal.pone.0031785. Epub 2012 Feb 20.

34.

Origins and evolution of the HET-s prion-forming protein: searching for other amyloid-forming solenoids.

Gendoo DM, Harrison PM.

PLoS One. 2011;6(11):e27342. doi: 10.1371/journal.pone.0027342. Epub 2011 Nov 11.

35.

Evidence for retrogene origins of the prion gene family.

Ehsani S, Tao R, Pocanschi CL, Ren H, Harrison PM, Schmitt-Ulms G.

PLoS One. 2011;6(10):e26800. doi: 10.1371/journal.pone.0026800. Epub 2011 Oct 27.

36.

Model for end-stage liver disease score predicts outcome in cirrhotic patients during pregnancy.

Westbrook RH, Yeoman AD, O'Grady JG, Harrison PM, Devlin J, Heneghan MA.

Clin Gastroenterol Hepatol. 2011 Aug;9(8):694-9. doi: 10.1016/j.cgh.2011.03.036. Epub 2011 Apr 15.

PMID:
21570482
37.

Non-invasive assessment of fibrosis in liver grafts due to hepatitis C virus recurrence.

J S Cross T, Jothimani D, Heneghan MA, Harrison PM.

Clin Transplant. 2011 May-Jun;25(3):345-51. doi: 10.1111/j.1399-0012.2011.01396.x. Epub 2011 Apr 25. Review.

PMID:
21517974
38.

Hepatitis delta virus.

Hughes SA, Wedemeyer H, Harrison PM.

Lancet. 2011 Jul 2;378(9785):73-85. doi: 10.1016/S0140-6736(10)61931-9. Epub 2011 Apr 20. Review.

PMID:
21511329
39.

Discordant and chameleon sequences: their distribution and implications for amyloidogenicity.

Gendoo DM, Harrison PM.

Protein Sci. 2011 Mar;20(3):567-79. doi: 10.1002/pro.590.

40.

Early predictors of corticosteroid treatment failure in icteric presentations of autoimmune hepatitis.

Yeoman AD, Westbrook RH, Zen Y, Maninchedda P, Portmann BC, Devlin J, O'Grady JG, Harrison PM, Heneghan MA.

Hepatology. 2011 Mar;53(3):926-34. doi: 10.1002/hep.24141.

PMID:
21374663
41.

LPS-annotate: complete annotation of compositionally biased regions in the protein knowledgebase.

Harbi D, Kumar M, Harrison PM.

Database (Oxford). 2011 Jan 6;2011:baq031. doi: 10.1093/database/baq031. Print 2011.

42.

Large-scale evidence for conservation of NMD candidature across mammals.

de Lima Morais DA, Harrison PM.

PLoS One. 2010 Jul 21;5(7):e11695. doi: 10.1371/journal.pone.0011695.

43.

Reply: Prospective validation of a noninvasive index for predicting liver fibrosis in hepatitis C virus-infected liver transplant recipients.

Cross TJ, Burroughs AK, Harrison PM.

Liver Transpl. 2010 Jun;16(6):789-90; author reply 791-2. doi: 10.1002/lt.22050. No abstract available.

44.

Generation of functional CD8+ T cells by human dendritic cells expressing glypican-3 epitopes.

O'Beirne J, Farzaneh F, Harrison PM.

J Exp Clin Cancer Res. 2010 May 13;29:48. doi: 10.1186/1756-9966-29-48.

45.

Mining mammalian transcript data for functional long non-coding RNAs.

Khachane AN, Harrison PM.

PLoS One. 2010 Apr 23;5(4):e10316. doi: 10.1371/journal.pone.0010316.

46.
47.

The importance of steatosis in chronic hepatitis C infection and its management: A review.

Cross TJ, Rashid MM, Berry PA, Harrison PM.

Hepatol Res. 2010 Mar;40(3):237-47. doi: 10.1111/j.1872-034X.2010.00626.x.

PMID:
20394672
48.

Selective rather than routine approach to endosopic retrograde cholangio-pancreatography in diagnosis of biliary atresia.

Hadzic N, Harrison PM.

J Hepatol. 2010 May;52(5):777. doi: 10.1016/j.jhep.2010.01.019. Epub 2010 Feb 18. No abstract available.

49.

Genomic assessment of the evolution of the prion protein gene family in vertebrates.

Harrison PM, Khachane A, Kumar M.

Genomics. 2010 May;95(5):268-77. doi: 10.1016/j.ygeno.2010.02.008. Epub 2010 Mar 3.

50.

A simple, noninvasive test for the diagnosis of liver fibrosis in patients with hepatitis C recurrence after liver transplantation.

Cross TJ, Calvaruso V, Foxton MR, Manousou P, Quaglia A, Grillo F, Dhillon AP, Nolan J, Chang TP, O'Grady J, Heneghan MA, O'Beirne JP, Burroughs AK, Harrison PM.

J Viral Hepat. 2010 Sep;17(9):640-9. doi: 10.1111/j.1365-2893.2009.01222.x. Epub 2009 Nov 17.

PMID:
19922441

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