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Items: 1 to 50 of 229

1.

High-dimensional geometry of population responses in visual cortex.

Stringer C, Pachitariu M, Steinmetz N, Carandini M, Harris KD.

Nature. 2019 Jul;571(7765):361-365. doi: 10.1038/s41586-019-1346-5. Epub 2019 Jun 26.

PMID:
31243367
2.

Aluminium-catalysed isocyanate trimerization, enhanced by exploiting a dynamic coordination sphere.

Bahili MA, Stokes EC, Amesbury RC, Ould DMC, Christo B, Horne RJ, Kariuki BM, Stewart JA, Taylor RL, Williams PA, Jones MD, Harris KDM, Ward BD.

Chem Commun (Camb). 2019 Jul 7;55(53):7679-7682. doi: 10.1039/c9cc03339d. Epub 2019 Jun 17.

PMID:
31204737
3.

Publisher Correction: RdDM-independent de novo and heterochromatin DNA methylation by plant CMT and DNMT3 orthologs.

Yaari R, Katz A, Domb K, Harris KD, Zemach A, Ohad N.

Nat Commun. 2019 Jun 6;10(1):2552. doi: 10.1038/s41467-019-10558-6.

4.

The impact of bilateral ongoing activity on evoked responses in mouse cortex.

Shimaoka D, Steinmetz NA, Harris KD, Carandini M.

Elife. 2019 Apr 30;8. pii: e43533. doi: 10.7554/eLife.43533.

5.

Spontaneous behaviors drive multidimensional, brainwide activity.

Stringer C, Pachitariu M, Steinmetz N, Reddy CB, Carandini M, Harris KD.

Science. 2019 Apr 19;364(6437):255. doi: 10.1126/science.aav7893. Epub 2019 Apr 18.

PMID:
31000656
6.

Spatially resolved mapping of phase transitions in liquid-crystalline materials by X-ray birefringence imaging.

Zhou Y, Patterson R, Palmer BA, Edwards-Gau GR, Kariuki BM, Kumar NSS, Bruce DW, Dolbnya IP, Collins SP, Malandain A, Harris KDM.

Chem Sci. 2019 Jan 2;10(10):3005-3011. doi: 10.1039/c8sc05285a. eCollection 2019 Mar 14.

7.

RdDM-independent de novo and heterochromatin DNA methylation by plant CMT and DNMT3 orthologs.

Yaari R, Katz A, Domb K, Harris KD, Zemach A, Ohad N.

Nat Commun. 2019 Apr 8;10(1):1613. doi: 10.1038/s41467-019-09496-0. Erratum in: Nat Commun. 2019 Jun 6;10(1):2552.

8.

A Strategy for Probing the Evolution of Crystallization Processes by Low-Temperature Solid-State NMR and Dynamic Nuclear Polarization.

Vioglio PC, Thureau P, Juramy M, Ziarelli F, Viel S, Williams PA, Hughes CE, Harris KDM, Mollica G.

J Phys Chem Lett. 2019 Apr 4;10(7):1505-1510. doi: 10.1021/acs.jpclett.9b00306. Epub 2019 Mar 18.

PMID:
30882228
9.

Distinct Structure of Cortical Population Activity on Fast and Infraslow Timescales.

Okun M, Steinmetz NA, Lak A, Dervinis M, Harris KD.

Cereb Cortex. 2019 May 1;29(5):2196-2210. doi: 10.1093/cercor/bhz023.

10.

High-resolution data-driven model of the mouse connectome.

Knox JE, Harris KD, Graddis N, Whitesell JD, Zeng H, Harris JA, Shea-Brown E, Mihalas S.

Netw Neurosci. 2018 Dec 1;3(1):217-236. doi: 10.1162/netn_a_00066. eCollection 2019.

11.

Exploiting in-situ solid-state NMR spectroscopy to probe the early stages of hydration of calcium aluminate cement.

Hughes CE, Walkley B, Gardner LJ, Walling SA, Bernal SA, Iuga D, Provis JL, Harris KDM.

Solid State Nucl Magn Reson. 2019 Jul;99:1-6. doi: 10.1016/j.ssnmr.2019.01.003. Epub 2019 Jan 14.

12.

Effects of Arousal on Mouse Sensory Cortex Depend on Modality.

Shimaoka D, Harris KD, Carandini M.

Cell Rep. 2018 Dec 11;25(11):3230. doi: 10.1016/j.celrep.2018.11.105. No abstract available.

13.

Applying the handicap principle to biofilms: condition-dependent signalling in Bacillus subtilis microbial communities.

Harris KD, Kolodkin-Gal I.

Environ Microbiol. 2019 Feb;21(2):531-540. doi: 10.1111/1462-2920.14497. Epub 2019 Jan 8. Review.

PMID:
30536518
14.

Decision and navigation in mouse parietal cortex.

Krumin M, Lee JJ, Harris KD, Carandini M.

Elife. 2018 Nov 23;7. pii: e42583. doi: 10.7554/eLife.42583.

15.

Establishing the Transitory Existence of Amorphous Phases in Crystallization Pathways by the CLASSIC NMR Technique.

Hughes CE, Williams PA, Kariuki BM, Harris KDM.

Chemphyschem. 2018 Dec 19;19(24):3341-3345. doi: 10.1002/cphc.201800976. Epub 2018 Nov 7.

PMID:
30347124
16.

Coherent encoding of subjective spatial position in visual cortex and hippocampus.

Saleem AB, Diamanti EM, Fournier J, Harris KD, Carandini M.

Nature. 2018 Oct;562(7725):124-127. doi: 10.1038/s41586-018-0516-1. Epub 2018 Sep 10.

17.

Diversity of Interneurons in the Dorsal Striatum Revealed by Single-Cell RNA Sequencing and PatchSeq.

Muñoz-Manchado AB, Bengtsson Gonzales C, Zeisel A, Munguba H, Bekkouche B, Skene NG, Lönnerberg P, Ryge J, Harris KD, Linnarsson S, Hjerling-Leffler J.

Cell Rep. 2018 Aug 21;24(8):2179-2190.e7. doi: 10.1016/j.celrep.2018.07.053.

18.

A phenomenological model for structural phase transitions in incommensurate alkane/urea inclusion compounds.

Couzi M, Guillaume F, Harris KDM.

R Soc Open Sci. 2018 Jun 13;5(6):180058. doi: 10.1098/rsos.180058. eCollection 2018 Jun.

19.

Molecular Architecture of the Mouse Nervous System.

Zeisel A, Hochgerner H, Lönnerberg P, Johnsson A, Memic F, van der Zwan J, Häring M, Braun E, Borm LE, La Manno G, Codeluppi S, Furlan A, Lee K, Skene N, Harris KD, Hjerling-Leffler J, Arenas E, Ernfors P, Marklund U, Linnarsson S.

Cell. 2018 Aug 9;174(4):999-1014.e22. doi: 10.1016/j.cell.2018.06.021.

20.

Robustness of Spike Deconvolution for Neuronal Calcium Imaging.

Pachitariu M, Stringer C, Harris KD.

J Neurosci. 2018 Sep 12;38(37):7976-7985. doi: 10.1523/JNEUROSCI.3339-17.2018. Epub 2018 Aug 6.

21.

Polymorphic phase transformations of 3-chloro-trans-cinnamic acid and its solid solution with 3-bromo-trans-cinnamic acid.

Khoj MA, Hughes CE, Harris KDM, Kariuki BM.

Acta Crystallogr C Struct Chem. 2018 Aug 1;74(Pt 8):923-928. doi: 10.1107/S2053229618009269. Epub 2018 Jul 13.

PMID:
30080167
22.

Classes and continua of hippocampal CA1 inhibitory neurons revealed by single-cell transcriptomics.

Harris KD, Hochgerner H, Skene NG, Magno L, Katona L, Bengtsson Gonzales C, Somogyi P, Kessaris N, Linnarsson S, Hjerling-Leffler J.

PLoS Biol. 2018 Jun 18;16(6):e2006387. doi: 10.1371/journal.pbio.2006387. eCollection 2018 Jun.

23.

Community-based benchmarking improves spike rate inference from two-photon calcium imaging data.

Berens P, Freeman J, Deneux T, Chenkov N, McColgan T, Speiser A, Macke JH, Turaga SC, Mineault P, Rupprecht P, Gerhard S, Friedrich RW, Friedrich J, Paninski L, Pachitariu M, Harris KD, Bolte B, Machado TA, Ringach D, Stone J, Rogerson LE, Sofroniew NJ, Reimer J, Froudarakis E, Euler T, Román Rosón M, Theis L, Tolias AS, Bethge M.

PLoS Comput Biol. 2018 May 21;14(5):e1006157. doi: 10.1371/journal.pcbi.1006157. eCollection 2018 May.

24.

Vision and Locomotion Shape the Interactions between Neuron Types in Mouse Visual Cortex.

Dipoppa M, Ranson A, Krumin M, Pachitariu M, Carandini M, Harris KD.

Neuron. 2018 May 2;98(3):602-615.e8. doi: 10.1016/j.neuron.2018.03.037. Epub 2018 Apr 12.

25.

Insights into the Crystallization and Structural Evolution of Glycine Dihydrate by In Situ Solid-State NMR Spectroscopy.

Cerreia Vioglio P, Mollica G, Juramy M, Hughes CE, Williams PA, Ziarelli F, Viel S, Thureau P, Harris KDM.

Angew Chem Int Ed Engl. 2018 May 28;57(22):6619-6623. doi: 10.1002/anie.201801114. Epub 2018 May 8.

PMID:
29633439
26.

Effects of Arousal on Mouse Sensory Cortex Depend on Modality.

Shimaoka D, Harris KD, Carandini M.

Cell Rep. 2018 Mar 20;22(12):3160-3167. doi: 10.1016/j.celrep.2018.02.092. Erratum in: Cell Rep. 2018 Dec 11;25(11):3230.

27.

An individual-level selection model for the apparent altruism exhibited by cellular slime moulds.

Zahavi A, Harris KD, Nanjundiah V.

J Biosci. 2018 Mar;43(1):49-58.

PMID:
29485114
28.

Challenges and opportunities for large-scale electrophysiology with Neuropixels probes.

Steinmetz NA, Koch C, Harris KD, Carandini M.

Curr Opin Neurobiol. 2018 Jun;50:92-100. doi: 10.1016/j.conb.2018.01.009. Epub 2018 Feb 13. Review.

29.

Fully integrated silicon probes for high-density recording of neural activity.

Jun JJ, Steinmetz NA, Siegle JH, Denman DJ, Bauza M, Barbarits B, Lee AK, Anastassiou CA, Andrei A, Aydın Ç, Barbic M, Blanche TJ, Bonin V, Couto J, Dutta B, Gratiy SL, Gutnisky DA, Häusser M, Karsh B, Ledochowitsch P, Lopez CM, Mitelut C, Musa S, Okun M, Pachitariu M, Putzeys J, Rich PD, Rossant C, Sun WL, Svoboda K, Carandini M, Harris KD, Koch C, O'Keefe J, Harris TD.

Nature. 2017 Nov 8;551(7679):232-236. doi: 10.1038/nature24636.

30.

Ab initio random structure searching of organic molecular solids: assessment and validation against experimental data.

Zilka M, Dudenko DV, Hughes CE, Williams PA, Sturniolo S, Franks WT, Pickard CJ, Yates JR, Harris KDM, Brown SP.

Phys Chem Chem Phys. 2017 Oct 4;19(38):25949-25960. doi: 10.1039/c7cp04186a.

31.

Aberrant Cortical Activity in Multiple GCaMP6-Expressing Transgenic Mouse Lines.

Steinmetz NA, Buetfering C, Lecoq J, Lee CR, Peters AJ, Jacobs EAK, Coen P, Ollerenshaw DR, Valley MT, de Vries SEJ, Garrett M, Zhuang J, Groblewski PA, Manavi S, Miles J, White C, Lee E, Griffin F, Larkin JD, Roll K, Cross S, Nguyen TV, Larsen R, Pendergraft J, Daigle T, Tasic B, Thompson CL, Waters J, Olsen S, Margolis DJ, Zeng H, Hausser M, Carandini M, Harris KD.

eNeuro. 2017 Sep 6;4(5). pii: ENEURO.0207-17.2017. doi: 10.1523/ENEURO.0207-17.2017. eCollection 2017 Sep-Oct.

32.

High-Yield Methods for Accurate Two-Alternative Visual Psychophysics in Head-Fixed Mice.

Burgess CP, Lak A, Steinmetz NA, Zatka-Haas P, Bai Reddy C, Jacobs EAK, Linden JF, Paton JJ, Ranson A, Schröder S, Soares S, Wells MJ, Wool LE, Harris KD, Carandini M.

Cell Rep. 2017 Sep 5;20(10):2513-2524. doi: 10.1016/j.celrep.2017.08.047.

33.

Assessing the Detection Limit of a Minority Solid-State Form of a Pharmaceutical by 1H Double-Quantum Magic-Angle Spinning Nuclear Magnetic Resonance Spectroscopy.

Maruyoshi K, Iuga D, Watts AE, Hughes CE, Harris KDM, Brown SP.

J Pharm Sci. 2017 Nov;106(11):3372-3377. doi: 10.1016/j.xphs.2017.07.014. Epub 2017 Jul 25.

34.

Macroscopic Strain-Induced Transition from Quasi-infinite Gold Nanoparticle Chains to Defined Plasmonic Oligomers.

Steiner AM, Mayer M, Seuss M, Nikolov S, Harris KD, Alexeev A, Kuttner C, König TAF, Fery A.

ACS Nano. 2017 Sep 26;11(9):8871-8880. doi: 10.1021/acsnano.7b03087. Epub 2017 Aug 29.

PMID:
28719741
35.

Different roles for inhibition in the rhythm-generating respiratory network.

Harris KD, Dashevskiy T, Mendoza J, Garcia AJ 3rd, Ramirez JM, Shea-Brown E.

J Neurophysiol. 2017 Oct 1;118(4):2070-2088. doi: 10.1152/jn.00174.2017. Epub 2017 Jun 14.

36.
37.

`NMR Crystallization': in-situ NMR techniques for time-resolved monitoring of crystallization processes.

Harris KD, Hughes CE, Williams PA, Edwards-Gau GR.

Acta Crystallogr C Struct Chem. 2017 Mar 1;73(Pt 3):137-148. doi: 10.1107/S2053229616019811. Epub 2017 Feb 6.

PMID:
28257007
38.

Optimal Degrees of Synaptic Connectivity.

Litwin-Kumar A, Harris KD, Axel R, Sompolinsky H, Abbott LF.

Neuron. 2017 Mar 8;93(5):1153-1164.e7. doi: 10.1016/j.neuron.2017.01.030. Epub 2017 Feb 16.

39.

Salt Segregation and Sample Cleanup on Perfluoro-Coated Nanostructured Surfaces for Laser Desorption Ionization Mass Spectrometry of Biofluid Samples.

Zhou Y, Peng C, Harris KD, Mandal R, Harrison DJ.

Anal Chem. 2017 Mar 21;89(6):3362-3369. doi: 10.1021/acs.analchem.6b03934. Epub 2017 Mar 3.

PMID:
28215086
40.

Synaptic scaling in sleep.

Acsády L, Harris KD.

Science. 2017 Feb 3;355(6324):457. doi: 10.1126/science.aam7917. No abstract available.

PMID:
28154034
41.

Subcortical Source and Modulation of the Narrowband Gamma Oscillation in Mouse Visual Cortex.

Saleem AB, Lien AD, Krumin M, Haider B, Rosón MR, Ayaz A, Reinhold K, Busse L, Carandini M, Harris KD.

Neuron. 2017 Jan 18;93(2):315-322. doi: 10.1016/j.neuron.2016.12.028.

42.

Determining Molecular Orientations in Disordered Materials from X-ray Linear Dichroism at the Iodine L1-Edge.

Palmer BA, Collins SP, Hulliger J, Hughes CE, Harris KD.

J Am Chem Soc. 2016 Dec 21;138(50):16188-16191. doi: 10.1021/jacs.6b09054. Epub 2016 Dec 9.

PMID:
27935685
43.

Inhibitory control of correlated intrinsic variability in cortical networks.

Stringer C, Pachitariu M, Steinmetz NA, Okun M, Bartho P, Harris KD, Sahani M, Lesica NA.

Elife. 2016 Dec 7;5. pii: e19695. doi: 10.7554/eLife.19695.

44.

Calculation of solid-state NMR lineshapes using contour analysis.

Hughes CE, Harris KD.

Solid State Nucl Magn Reson. 2016 Nov;80:7-13. doi: 10.1016/j.ssnmr.2016.10.002. Epub 2016 Oct 13.

45.

Improving data quality in neuronal population recordings.

Harris KD, Quiroga RQ, Freeman J, Smith SL.

Nat Neurosci. 2016 Aug 26;19(9):1165-74. doi: 10.1038/nn.4365. Review.

46.

Spike sorting for large, dense electrode arrays.

Rossant C, Kadir SN, Goodman DFM, Schulman J, Hunter MLD, Saleem AB, Grosmark A, Belluscio M, Denfield GH, Ecker AS, Tolias AS, Solomon S, Buzsaki G, Carandini M, Harris KD.

Nat Neurosci. 2016 Apr;19(4):634-641. doi: 10.1038/nn.4268. Epub 2016 Mar 14.

47.

Long Term Recordings with Immobile Silicon Probes in the Mouse Cortex.

Okun M, Lak A, Carandini M, Harris KD.

PLoS One. 2016 Mar 9;11(3):e0151180. doi: 10.1371/journal.pone.0151180. eCollection 2016.

48.

Fabrication of Semiordered Nanopatterned Diamond-like Carbon and Titania Films for Blood Contacting Applications.

Nandakumar D, Bendavid A, Martin PJ, Harris KD, Ruys AJ, Lord MS.

ACS Appl Mater Interfaces. 2016 Mar 23;8(11):6802-10. doi: 10.1021/acsami.5b11614. Epub 2016 Mar 8.

PMID:
26928086
50.

Packet-based communication in the cortex.

Luczak A, McNaughton BL, Harris KD.

Nat Rev Neurosci. 2015 Dec;16(12):745-55. doi: 10.1038/nrn4026. Epub 2015 Oct 28. Review.

PMID:
26507295

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