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Items: 17

1.

MaizeDIG: Maize Database of Images and Genomes.

Cho KT, Portwood JL 2nd, Gardiner JM, Harper LC, Lawrence-Dill CJ, Friedberg I, Andorf CM.

Front Plant Sci. 2019 Aug 28;10:1050. doi: 10.3389/fpls.2019.01050. eCollection 2019.

2.

MaizeGDB 2018: the maize multi-genome genetics and genomics database.

Portwood JL 2nd, Woodhouse MR, Cannon EK, Gardiner JM, Harper LC, Schaeffer ML, Walsh JR, Sen TZ, Cho KT, Schott DA, Braun BL, Dietze M, Dunfee B, Elsik CG, Manchanda N, Coe E, Sachs M, Stinard P, Tolbert J, Zimmerman S, Andorf CM.

Nucleic Acids Res. 2019 Jan 8;47(D1):D1146-D1154. doi: 10.1093/nar/gky1046.

3.

Surveying the Maize community for their diversity and pedigree visualization needs to prioritize tool development and curation.

Sen TZ, Braun BL, Schott DA, Portwood Ii JL, Schaeffer ML, Harper LC, Gardiner JM, Cannon EK, Andorf CM.

Database (Oxford). 2017 Jan 1;2017. doi: 10.1093/database/bax031.

4.

MaizeGDB update: new tools, data and interface for the maize model organism database.

Andorf CM, Cannon EK, Portwood JL 2nd, Gardiner JM, Harper LC, Schaeffer ML, Braun BL, Campbell DA, Vinnakota AG, Sribalusu VV, Huerta M, Cho KT, Wimalanathan K, Richter JD, Mauch ED, Rao BS, Birkett SM, Sen TZ, Lawrence-Dill CJ.

Nucleic Acids Res. 2016 Jan 4;44(D1):D1195-201. doi: 10.1093/nar/gkv1007. Epub 2015 Oct 1.

5.

POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data.

Cannon EK, Birkett SM, Braun BL, Kodavali S, Jennewein DM, Yilmaz A, Antonescu V, Antonescu C, Harper LC, Gardiner JM, Schaeffer ML, Campbell DA, Andorf CM, Andorf D, Lisch D, Koch KE, McCarty DR, Quackenbush J, Grotewold E, Lushbough CM, Sen TZ, Lawrence CJ.

Int J Plant Genomics. 2011;2011:923035. doi: 10.1155/2011/923035. Epub 2011 Dec 27.

6.

MaizeGDB: curation and outreach go hand-in-hand.

Schaeffer ML, Harper LC, Gardiner JM, Andorf CM, Campbell DA, Cannon EK, Sen TZ, Lawrence CJ.

Database (Oxford). 2011 May 29;2011:bar022. doi: 10.1093/database/bar022. Print 2011.

7.

The MaizeGDB Genome Browser tutorial: one example of database outreach to biologists via video.

Harper LC, Schaeffer ML, Thistle J, Gardiner JM, Andorf CM, Campbell DA, Cannon EK, Braun BL, Birkett SM, Lawrence CJ, Sen TZ.

Database (Oxford). 2011 May 9;2011:bar016. doi: 10.1093/database/bar016. Print 2011.

8.

Choosing a genome browser for a Model Organism Database: surveying the maize community.

Sen TZ, Harper LC, Schaeffer ML, Andorf CM, Seigfried TE, Campbell DA, Lawrence CJ.

Database (Oxford). 2010 Jul 6;2010:baq007. doi: 10.1093/database/baq007.

9.

The Locus Lookup tool at MaizeGDB: identification of genomic regions in maize by integrating sequence information with physical and genetic maps.

Andorf CM, Lawrence CJ, Harper LC, Schaeffer ML, Campbell DA, Sen TZ.

Bioinformatics. 2010 Feb 1;26(3):434-6. doi: 10.1093/bioinformatics/btp556.

PMID:
20124413
10.

MaizeGDB becomes 'sequence-centric'.

Sen TZ, Andorf CM, Schaeffer ML, Harper LC, Sparks ME, Duvick J, Brendel VP, Cannon E, Campbell DA, Lawrence CJ.

Database (Oxford). 2009;2009:bap020. doi: 10.1093/database/bap020. Epub 2009 Dec 7.

11.

MaizeGDB: The maize model organism database for basic, translational, and applied research.

Lawrence CJ, Harper LC, Schaeffer ML, Sen TZ, Seigfried TE, Campbell DA.

Int J Plant Genomics. 2008;2008:496957. doi: 10.1155/2008/496957.

12.

Functional analysis of maize RAD51 in meiosis and double-strand break repair.

Li J, Harper LC, Golubovskaya I, Wang CR, Weber D, Meeley RB, McElver J, Bowen B, Cande WZ, Schnable PS.

Genetics. 2007 Jul;176(3):1469-82. Epub 2007 May 16.

13.

MaizeGDB's new data types, resources and activities.

Lawrence CJ, Schaeffer ML, Seigfried TE, Campbell DA, Harper LC.

Nucleic Acids Res. 2007 Jan;35(Database issue):D895-900.

14.

Integrating genetic linkage maps with pachytene chromosome structure in maize.

Anderson LK, Salameh N, Bass HW, Harper LC, Cande WZ, Weber G, Stack SM.

Genetics. 2004 Apr;166(4):1923-33.

15.

The pam1 gene is required for meiotic bouquet formation and efficient homologous synapsis in maize (Zea mays L.).

Golubovskaya IN, Harper LC, Pawlowski WP, Schichnes D, Cande WZ.

Genetics. 2002 Dec;162(4):1979-93.

16.

Mapping a new frontier; development of integrated cytogenetic maps in plants.

Harper LC, Cande WZ.

Funct Integr Genomics. 2000 Sep;1(2):89-98. Review.

PMID:
11793225
17.

liguleless1 encodes a nuclear-localized protein required for induction of ligules and auricles during maize leaf organogenesis.

Moreno MA, Harper LC, Krueger RW, Dellaporta SL, Freeling M.

Genes Dev. 1997 Mar 1;11(5):616-28.

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