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Key sub-community dynamics of medium-chain carboxylate production.

Lambrecht J, Cichocki N, Schattenberg F, Kleinsteuber S, Harms H, Müller S, Sträuber H.

Microb Cell Fact. 2019 May 28;18(1):92. doi: 10.1186/s12934-019-1143-8.


Associational effects in the microbial neighborhood.

Worrich A, Musat N, Harms H.

ISME J. 2019 May 21. doi: 10.1038/s41396-019-0444-6. [Epub ahead of print] Review.


Quantitative estimation of extravascular lung water volume and preload by dynamic 15O-water positron emission tomography.

Nielsen RR, Sörensen J, Tolbod L, Alstrup AKO, Iversen P, Frederiksen CA, Wiggers H, Jorsal A, Frøkier J, Harms HJ.

Eur Heart J Cardiovasc Imaging. 2019 Mar 18. pii: jez038. doi: 10.1093/ehjci/jez038. [Epub ahead of print]


Cardiovascular Effects of Treatment With the Ketone Body 3-Hydroxybutyrate in Chronic Heart Failure Patients.

Nielsen R, Møller N, Gormsen LC, Tolbod LP, Hansson NH, Sorensen J, Harms HJ, Frøkiær J, Eiskjaer H, Jespersen NR, Mellemkjaer S, Lassen TR, Pryds K, Bøtker HE, Wiggers H.

Circulation. 2019 Apr 30;139(18):2129-2141. doi: 10.1161/CIRCULATIONAHA.118.036459.


Determination of Microbial Maintenance in Acetogenesis and Methanogenesis by Experimental and Modeling Techniques.

Bonk F, Popp D, Weinrich S, Sträuber H, Becker D, Kleinsteuber S, Harms H, Centler F.

Front Microbiol. 2019 Feb 8;10:166. doi: 10.3389/fmicb.2019.00166. eCollection 2019.


AgNPs Change Microbial Community Structures of Wastewater.

Guo Y, Cichocki N, Schattenberg F, Geffers R, Harms H, Müller S.

Front Microbiol. 2019 Jan 8;9:3211. doi: 10.3389/fmicb.2018.03211. eCollection 2018.


Myocardial Oxygen Consumption and Efficiency in Patients With Cardiac Amyloidosis.

Clemmensen TS, Soerensen J, Hansson NH, Tolbod LP, Harms HJ, Eiskjær H, Mikkelsen F, Wiggers H, Andersen NF, Poulsen SH.

J Am Heart Assoc. 2018 Nov 6;7(21):e009974. doi: 10.1161/JAHA.118.009974.


Ammonia Inhibition of Anaerobic Volatile Fatty Acid Degrading Microbial Communities.

Bonk F, Popp D, Weinrich S, Sträuber H, Kleinsteuber S, Harms H, Centler F.

Front Microbiol. 2018 Nov 30;9:2921. doi: 10.3389/fmicb.2018.02921. eCollection 2018.


Non-invasive quantification of tumor blood flow in prostate cancer using 15O-H2O PET/CT.

Tolbod LP, Nielsen MM, Pedersen BG, Høyer S, Harms HJ, Borre M, Borghammer P, Bouchelouche K, Frøkiær J, Sørensen J.

Am J Nucl Med Mol Imaging. 2018 Oct 20;8(5):292-302. eCollection 2018.


Fractional flow reserve, instantaneous wave-free ratio, and resting Pd/Pa compared with [15O]H2O positron emission tomography myocardial perfusion imaging: a PACIFIC trial sub-study.

de Waard GA, Danad I, Petraco R, Driessen RS, Raijmakers PG, Teunissen PF, van de Ven PM, van Leeuwen MAH, Nap A, Harms HJ, Lammertsma AA, Davies JE, Knaapen P, van Royen N.

Eur Heart J. 2018 Dec 7;39(46):4072-4081. doi: 10.1093/eurheartj/ehy632.


Electric Field Effects on Bacterial Deposition and Transport in Porous Media.

Shan Y, Harms H, Wick LY.

Environ Sci Technol. 2018 Dec 18;52(24):14294-14301. doi: 10.1021/acs.est.8b03648. Epub 2018 Nov 29.


Analysis of the Genome and Metabolome of Marine Myxobacteria Reveals High Potential for Biosynthesis of Novel Specialized Metabolites.

Amiri Moghaddam J, Crüsemann M, Alanjary M, Harms H, Dávila-Céspedes A, Blom J, Poehlein A, Ziemert N, König GM, Schäberle TF.

Sci Rep. 2018 Nov 9;8(1):16600. doi: 10.1038/s41598-018-34954-y.


3'-Deoxy-3'-[18F]Fluorothymidine Positron Emission Tomography Depicts Heterogeneous Proliferation Pathology in Idiopathic Pulmonary Arterial Hypertension Patient Lung.

Ashek A, Spruijt OA, Harms HJ, Lammertsma AA, Cupitt J, Dubois O, Wharton J, Dabral S, Pullamsetti SS, Huisman MC, Frings V, Boellaard R, de Man FS, Botros L, Jansen S, Vonk Noordegraaf A, Wilkins MR, Bogaard HJ, Zhao L.

Circ Cardiovasc Imaging. 2018 Aug;11(8):e007402. doi: 10.1161/CIRCIMAGING.117.007402.


Microbial community shifts in biogas reactors upon complete or partial ammonia inhibition.

Lv Z, Leite AF, Harms H, Glaser K, Liebetrau J, Kleinsteuber S, Nikolausz M.

Appl Microbiol Biotechnol. 2019 Jan;103(1):519-533. doi: 10.1007/s00253-018-9444-0. Epub 2018 Oct 17.


Intermittent fasting for microbes: how discontinuous feeding increases functional stability in anaerobic digestion.

Bonk F, Popp D, Weinrich S, Sträuber H, Kleinsteuber S, Harms H, Centler F.

Biotechnol Biofuels. 2018 Oct 6;11:274. doi: 10.1186/s13068-018-1279-5. eCollection 2018.


PCR-based quantification of taxa-specific abundances in microbial communities: Quantifying and avoiding common pitfalls.

Bonk F, Popp D, Harms H, Centler F.

J Microbiol Methods. 2018 Oct;153:139-147. doi: 10.1016/j.mimet.2018.09.015. Epub 2018 Sep 26. Review.


Delftia sp. LCW, a strain isolated from a constructed wetland shows novel properties for dimethylphenol isomers degradation.

Vásquez-Piñeros MA, Martínez-Lavanchy PM, Jehmlich N, Pieper DH, Rincón CA, Harms H, Junca H, Heipieper HJ.

BMC Microbiol. 2018 Sep 6;18(1):108. doi: 10.1186/s12866-018-1255-z.


Characterizing Microbiome Dynamics - Flow Cytometry Based Workflows from Pure Cultures to Natural Communities.

Lambrecht J, Schattenberg F, Harms H, Mueller S.

J Vis Exp. 2018 Jul 12;(137). doi: 10.3791/58033.


Antimicrobial Dialkylresorcins from Marine-Derived Microorganisms: Insights into Their Mode of Action and Putative Ecological Relevance.

Harms H, Klöckner A, Schrör J, Josten M, Kehraus S, Crüsemann M, Hanke W, Schneider T, Schäberle TF, König GM.

Planta Med. 2018 Dec;84(18):1363-1371. doi: 10.1055/a-0653-7451. Epub 2018 Jul 10.


Automatic calculation of myocardial external efficiency using a single 11C-acetate PET scan.

Harms HJ, Hansson NHS, Kero T, Baron T, Tolbod LP, Kim WY, Frøkiær J, Flachskampf FA, Wiggers H, Sörensen J.

J Nucl Cardiol. 2018 Dec;25(6):1937-1944. doi: 10.1007/s12350-018-1338-0. Epub 2018 Jun 26.


Spatiotemporal disturbance characteristics determine functional stability and collapse risk of simulated microbial ecosystems.

König S, Worrich A, Banitz T, Centler F, Harms H, Kästner M, Miltner A, Wick LY, Thullner M, Frank K.

Sci Rep. 2018 Jun 22;8(1):9488. doi: 10.1038/s41598-018-27785-4.


Molecular quantification and differentiation of Candida species in biological specimens of patients with liver cirrhosis.

Krohn S, Zeller K, Böhm S, Chatzinotas A, Harms H, Hartmann J, Heidtmann A, Herber A, Kaiser T, Treuheit M, Hoffmeister A, Berg T, Engelmann C.

PLoS One. 2018 Jun 13;13(6):e0197319. doi: 10.1371/journal.pone.0197319. eCollection 2018.


Test-retest repeatability of myocardial oxidative metabolism and efficiency using standalone dynamic 11C-acetate PET and multimodality approaches in healthy controls.

Hansson NH, Harms HJ, Kim WY, Nielsen R, Tolbod LP, Frøkiær J, Bouchelouche K, Poulsen SH, Wiggers H, Parner ET, Sörensen J.

J Nucl Cardiol. 2018 Dec;25(6):1929-1936. doi: 10.1007/s12350-018-1302-z. Epub 2018 May 31.


Draft Genome Sequence of Bacillus sp. Strain M21, Isolated from the Arid Area of Matmata, Tunisia.

Nasfi Z, Poehlein A, Harms H, Goralski E, Fisch KM, Daniel R, König GM, Schäberle TF, Bachoual R.

Genome Announc. 2018 Apr 26;6(17). pii: e00323-18. doi: 10.1128/genomeA.00323-18.


Functional Resistance to Recurrent Spatially Heterogeneous Disturbances Is Facilitated by Increased Activity of Surviving Bacteria in a Virtual Ecosystem.

König S, Worrich A, Banitz T, Harms H, Kästner M, Miltner A, Wick LY, Frank K, Thullner M, Centler F.

Front Microbiol. 2018 Apr 11;9:734. doi: 10.3389/fmicb.2018.00734. eCollection 2018.


Metabolic Adaptation of Methanogens in Anaerobic Digesters Upon Trace Element Limitation.

Wintsche B, Jehmlich N, Popp D, Harms H, Kleinsteuber S.

Front Microbiol. 2018 Mar 13;9:405. doi: 10.3389/fmicb.2018.00405. eCollection 2018.


Changes of the Specific Infectivity of Tracer Phages during Transport in Porous Media.

Ghanem N, Trost M, Sánchez Fontanet L, Harms H, Chatzinotas A, Wick LY.

Environ Sci Technol. 2018 Mar 20;52(6):3486-3492. doi: 10.1021/acs.est.7b06271. Epub 2018 Mar 9.


Interactions between predation and disturbances shape prey communities.

Karakoç C, Radchuk V, Harms H, Chatzinotas A.

Sci Rep. 2018 Feb 14;8(1):2968. doi: 10.1038/s41598-018-21219-x.


Comparison of Rumen and Manure Microbiomes and Implications for the Inoculation of Anaerobic Digesters.

Ozbayram EG, Ince O, Ince B, Harms H, Kleinsteuber S.

Microorganisms. 2018 Feb 14;6(1). pii: E15. doi: 10.3390/microorganisms6010015.


Ecological Stability Properties of Microbial Communities Assessed by Flow Cytometry.

Liu Z, Cichocki N, Bonk F, Günther S, Schattenberg F, Harms H, Centler F, Müller S.

mSphere. 2018 Jan 17;3(1). pii: e00564-17. doi: 10.1128/mSphere.00564-17. eCollection 2018 Jan-Feb.


Calculation of left ventricular volumes and ejection fraction from dynamic cardiac-gated 15O-water PET/CT: 5D-PET.

Nordström J, Kero T, Harms HJ, Widström C, Flachskampf FA, Sörensen J, Lubberink M.

EJNMMI Phys. 2017 Nov 14;4(1):26. doi: 10.1186/s40658-017-0195-2.


Abnormal Coronary Flow Velocity Reserve and Decreased Myocardial Contractile Reserve Are Main Factors in Relation to Physical Exercise Capacity in Cardiac Amyloidosis.

Clemmensen TS, Eiskjær H, Mølgaard H, Larsen AH, Soerensen J, Andersen NF, Tolbod LP, Harms HJ, Poulsen SH.

J Am Soc Echocardiogr. 2018 Jan;31(1):71-78. doi: 10.1016/j.echo.2017.09.007. Epub 2017 Oct 27.


Flow cytometric quantification, sorting and sequencing of methanogenic archaea based on F420 autofluorescence.

Lambrecht J, Cichocki N, Hübschmann T, Koch C, Harms H, Müller S.

Microb Cell Fact. 2017 Oct 30;16(1):180. doi: 10.1186/s12934-017-0793-7.


Whole-Body Biodistribution, Dosimetry, and Metabolite Correction of [11C]Palmitate: A PET Tracer for Imaging of Fatty Acid Metabolism.

Christensen NL, Jakobsen S, Schacht AC, Munk OL, Alstrup AKO, Tolbod LP, Harms HJ, Nielsen S, Gormsen LC.

Mol Imaging. 2017 Jan-Dec;16:1536012117734485. doi: 10.1177/1536012117734485.


Soil Viral Communities Vary Temporally and along a Land Use Transect as Revealed by Virus-Like Particle Counting and a Modified Community Fingerprinting Approach (fRAPD).

Narr A, Nawaz A, Wick LY, Harms H, Chatzinotas A.

Front Microbiol. 2017 Oct 10;8:1975. doi: 10.3389/fmicb.2017.01975. eCollection 2017.


Metoprolol Reduces Hemodynamic and Metabolic Overload in Asymptomatic Aortic Valve Stenosis Patients: A Randomized Trial.

Hansson NH, Sörensen J, Harms HJ, Kim WY, Nielsen R, Tolbod LP, Frøkiær J, Bouchelouche K, Dodt KK, Sihm I, Poulsen SH, Wiggers H.

Circ Cardiovasc Imaging. 2017 Oct;10(10). pii: e006557. doi: 10.1161/CIRCIMAGING.117.006557.


Draft Genome Sequence of Zobellia sp. Strain OII3, Isolated from the Coastal Zone of the Baltic Sea.

Harms H, Poehlein A, Thürmer A, König GM, Schäberle TF.

Genome Announc. 2017 Sep 7;5(36). pii: e00737-17. doi: 10.1128/genomeA.00737-17.


Inotropic myocardial reserve deficiency is the predominant feature of exercise haemodynamics in cardiac amyloidosis.

Clemmensen TS, Mølgaard H, Sörensen J, Eiskjaer H, Andersen NF, Mellemkjaer S, Andersen MJ, Tolbod LP, Harms HJ, Poulsen SH.

Eur J Heart Fail. 2017 Nov;19(11):1457-1465. doi: 10.1002/ejhf.899. Epub 2017 Aug 24.


Effect of liraglutide on myocardial glucose uptake and blood flow in stable chronic heart failure patients: A double-blind, randomized, placebo-controlled LIVE sub-study.

Nielsen R, Jorsal A, Iversen P, Tolbod LP, Bouchelouche K, Sørensen J, Harms HJ, Flyvbjerg A, Tarnow L, Kistorp C, Gustafsson I, Bøtker HE, Wiggers H.

J Nucl Cardiol. 2019 Apr;26(2):585-597. doi: 10.1007/s12350-017-1000-2. Epub 2017 Aug 2.


Mass Cytometry for Detection of Silver at the Bacterial Single Cell Level.

Guo Y, Baumgart S, Stärk HJ, Harms H, Müller S.

Front Microbiol. 2017 Jul 17;8:1326. doi: 10.3389/fmicb.2017.01326. eCollection 2017.


Mycelium-mediated transfer of water and nutrients stimulates bacterial activity in dry and oligotrophic environments.

Worrich A, Stryhanyuk H, Musat N, König S, Banitz T, Centler F, Frank K, Thullner M, Harms H, Richnow HH, Miltner A, Kästner M, Wick LY.

Nat Commun. 2017 Jun 7;8:15472. doi: 10.1038/ncomms15472.


Effects of exenatide on cardiac function, perfusion, and energetics in type 2 diabetic patients with cardiomyopathy: a randomized controlled trial against insulin glargine.

Chen WJY, Diamant M, de Boer K, Harms HJ, Robbers LFHJ, van Rossum AC, Kramer MHH, Lammertsma AA, Knaapen P.

Cardiovasc Diabetol. 2017 May 19;16(1):67. doi: 10.1186/s12933-017-0549-z.


Disease Stage-Dependent Changes in Cardiac Contractile Performance and Oxygen Utilization Underlie Reduced Myocardial Efficiency in Human Inherited Hypertrophic Cardiomyopathy.

Güçlü A, Knaapen P, Harms HJ, Parbhudayal RY, Michels M, Lammertsma AA, van Rossum AC, Germans T, van der Velden J.

Circ Cardiovasc Imaging. 2017 May;10(5). pii: e005604. doi: 10.1161/CIRCIMAGING.116.005604.


Killing the killer: predation between protists and predatory bacteria.

Johnke J, Boenigk J, Harms H, Chatzinotas A.

FEMS Microbiol Lett. 2017 May 1;364(9). doi: 10.1093/femsle/fnx089.


Inhibitory Effect of Coumarin on Syntrophic Fatty Acid-Oxidizing and Methanogenic Cultures and Biogas Reactor Microbiomes.

Popp D, Plugge CM, Kleinsteuber S, Harms H, Sträuber H.

Appl Environ Microbiol. 2017 Jun 16;83(13). pii: e00438-17. doi: 10.1128/AEM.00438-17. Print 2017 Jul 1.


Transient recovery dynamics of a predator-prey system under press and pulse disturbances.

Karakoç C, Singer A, Johst K, Harms H, Chatzinotas A.

BMC Ecol. 2017 Apr 4;17(1):13. doi: 10.1186/s12898-017-0123-2.


Isolation and characterization of Magnetospirillum sp. strain 15-1 as a representative anaerobic toluene-degrader from a constructed wetland model.

Meyer-Cifuentes I, Martinez-Lavanchy PM, Marin-Cevada V, Böhnke S, Harms H, Müller JA, Heipieper HJ.

PLoS One. 2017 Apr 3;12(4):e0174750. doi: 10.1371/journal.pone.0174750. eCollection 2017.


The benzene metabolite 1,4-benzoquinone reduces regulatory T-cell function: A potential mechanism for tobacco smoke-associated atopic dermatitis.

Winter M, Thürmann L, Gu Z, Schüürmann G, Herberth G, Hinz D, von Bergen M, Harms H, Olek S, Röder S, Borte M, Eils R, Lehmann I, Trump S.

J Allergy Clin Immunol. 2017 Aug;140(2):603-605. doi: 10.1016/j.jaci.2017.01.034. Epub 2017 Mar 6. No abstract available.


Ketone Body Infusion With 3-Hydroxybutyrate Reduces Myocardial Glucose Uptake and Increases Blood Flow in Humans: A Positron Emission Tomography Study.

Gormsen LC, Svart M, Thomsen HH, Søndergaard E, Vendelbo MH, Christensen N, Tolbod LP, Harms HJ, Nielsen R, Wiggers H, Jessen N, Hansen J, Bøtker HE, Møller N.

J Am Heart Assoc. 2017 Feb 27;6(3). pii: e005066. doi: 10.1161/JAHA.116.005066.


Complete genome sequence of Pseudoalteromonas phage vB_PspS-H40/1 (formerly H40/1) that infects Pseudoalteromonas sp. strain H40 and is used as biological tracer in hydrological transport studies.

Kallies R, Kiesel B, Schmidt M, Kacza J, Ghanem N, Narr A, Zopfi J, Wick LY, Hackermüller J, Harms H, Chatzinotas A.

Stand Genomic Sci. 2017 Feb 2;12:20. doi: 10.1186/s40793-017-0235-5. eCollection 2017.

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