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Items: 1 to 50 of 52

1.

Multiple feedback loops of the Arabidopsis circadian clock provide rhythmic robustness across environmental conditions.

Shalit-Kaneh A, Kumimoto RW, Filkov V, Harmer SL.

Proc Natl Acad Sci U S A. 2018 Jul 3;115(27):7147-7152. doi: 10.1073/pnas.1805524115. Epub 2018 Jun 18.

PMID:
29915068
2.

Growth-mediated plant movements: hidden in plain sight.

Harmer SL, Brooks CJ.

Curr Opin Plant Biol. 2018 Feb;41:89-94. doi: 10.1016/j.pbi.2017.10.003. Epub 2017 Nov 3. Review.

PMID:
29107827
3.

Circadian rhythms vary over the growing season and correlate with fitness components.

Rubin MJ, Brock MT, Davis AM, German ZM, Knapp M, Welch SM, Harmer SL, Maloof JN, Davis SJ, Weinig C.

Mol Ecol. 2017 Oct;26(20):5528-5540. doi: 10.1111/mec.14287. Epub 2017 Sep 8.

PMID:
28792639
4.

The REVEILLE Clock Genes Inhibit Growth of Juvenile and Adult Plants by Control of Cell Size.

Gray JA, Shalit-Kaneh A, Chu DN, Hsu PY, Harmer SL.

Plant Physiol. 2017 Apr;173(4):2308-2322. doi: 10.1104/pp.17.00109. Epub 2017 Mar 2.

5.

The effect of different pyrolysis temperatures on the speciation and availability in soil of P in biochar produced from the solid fraction of manure.

Bruun S, Harmer SL, Bekiaris G, Christel W, Zuin L, Hu Y, Jensen LS, Lombi E.

Chemosphere. 2017 Feb;169:377-386. doi: 10.1016/j.chemosphere.2016.11.058. Epub 2016 Nov 22.

PMID:
27886540
6.

YUCCA auxin biosynthetic genes are required for Arabidopsis shade avoidance.

Müller-Moulé P, Nozue K, Pytlak ML, Palmer CM, Covington MF, Wallace AD, Harmer SL, Maloof JN.

PeerJ. 2016 Oct 13;4:e2574. eCollection 2016.

7.

Circadian regulation of sunflower heliotropism, floral orientation, and pollinator visits.

Atamian HS, Creux NM, Brown EA, Garner AG, Blackman BK, Harmer SL.

Science. 2016 Aug 5;353(6299):587-90. doi: 10.1126/science.aaf9793.

8.

Circadian regulation of hormone signaling and plant physiology.

Atamian HS, Harmer SL.

Plant Mol Biol. 2016 Aug;91(6):691-702. doi: 10.1007/s11103-016-0477-4. Epub 2016 Apr 9. Review.

9.

Reassess the t Test: Interact with All Your Data via ANOVA.

Brady SM, Burow M, Busch W, Carlborg Ö, Denby KJ, Glazebrook J, Hamilton ES, Harmer SL, Haswell ES, Maloof JN, Springer NM, Kliebenstein DJ.

Plant Cell. 2015 Aug;27(8):2088-94. doi: 10.1105/tpc.15.00238. Epub 2015 Jul 28.

10.

A Constitutively Active Allele of Phytochrome B Maintains Circadian Robustness in the Absence of Light.

Jones MA, Hu W, Litthauer S, Lagarias JC, Harmer SL.

Plant Physiol. 2015 Sep;169(1):814-25. doi: 10.1104/pp.15.00782. Epub 2015 Jul 8.

11.

Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts.

Anver S, Roguev A, Zofall M, Krogan NJ, Grewal SI, Harmer SL.

EMBO Rep. 2014 Aug;15(8):894-902. doi: 10.15252/embr.201438902. Epub 2014 Jun 23.

12.

Turning heads: the biology of solar tracking in sunflower.

Vandenbrink JP, Brown EA, Harmer SL, Blackman BK.

Plant Sci. 2014 Jul;224:20-6. doi: 10.1016/j.plantsci.2014.04.006. Epub 2014 Apr 13. Review.

PMID:
24908502
13.

Global profiling of the circadian transcriptome using microarrays.

Hsu PY, Harmer SL.

Methods Mol Biol. 2014;1158:45-56. doi: 10.1007/978-1-4939-0700-7_3.

14.

Interview with Stacey L. Harmer.

Harmer SL.

Trends Plant Sci. 2014 Apr;19(4):203-4. doi: 10.1016/j.tplants.2014.02.008. Epub 2014 Mar 12. No abstract available.

PMID:
24630072
15.

Wheels within wheels: the plant circadian system.

Hsu PY, Harmer SL.

Trends Plant Sci. 2014 Apr;19(4):240-9. doi: 10.1016/j.tplants.2013.11.007. Epub 2013 Dec 24. Review.

16.

Accurate timekeeping is controlled by a cycling activator in Arabidopsis.

Hsu PY, Devisetty UK, Harmer SL.

Elife. 2013 Apr 30;2:e00473. doi: 10.7554/eLife.00473.

17.

The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin.

Zemach A, Kim MY, Hsieh PH, Coleman-Derr D, Eshed-Williams L, Thao K, Harmer SL, Zilberman D.

Cell. 2013 Mar 28;153(1):193-205. doi: 10.1016/j.cell.2013.02.033.

18.

Unanticipated regulatory roles for Arabidopsis phytochromes revealed by null mutant analysis.

Hu W, Franklin KA, Sharrock RA, Jones MA, Harmer SL, Lagarias JC.

Proc Natl Acad Sci U S A. 2013 Jan 22;110(4):1542-7. doi: 10.1073/pnas.1221738110. Epub 2013 Jan 9.

19.

Classification of time-of-flight secondary ion mass spectrometry spectra from complex Cu-Fe sulphides by principal component analysis and artificial neural networks.

Kalegowda Y, Harmer SL.

Anal Chim Acta. 2013 Jan 8;759:21-7. doi: 10.1016/j.aca.2012.11.001. Epub 2012 Nov 9.

PMID:
23260673
20.

Circadian phase has profound effects on differential expression analysis.

Hsu PY, Harmer SL.

PLoS One. 2012;7(11):e49853. doi: 10.1371/journal.pone.0049853. Epub 2012 Nov 20.

21.

Mutation of Arabidopsis spliceosomal timekeeper locus1 causes circadian clock defects.

Jones MA, Williams BA, McNicol J, Simpson CG, Brown JW, Harmer SL.

Plant Cell. 2012 Oct;24(10):4066-82. doi: 10.1105/tpc.112.104828. Epub 2012 Oct 30.

22.

Chemometric and multivariate statistical analysis of time-of-flight secondary ion mass spectrometry spectra from complex Cu-Fe sulfides.

Kalegowda Y, Harmer SL.

Anal Chem. 2012 Mar 20;84(6):2754-60. doi: 10.1021/ac202971y. Epub 2012 Mar 2.

PMID:
22324886
23.

Synchrotron FTIR microscopy of Langmuir-Blodgett monolayers and polyelectrolyte multilayers at the solid-solid interface.

Beattie DA, Beaussart A, Mierczynska-Vasilev A, Harmer SL, Thierry B, Puskar L, Tobin M.

Langmuir. 2012 Jan 24;28(3):1683-8. doi: 10.1021/la2045543. Epub 2012 Jan 12.

PMID:
22225512
24.

Synchrotron scanning photoemission microscopy of homogeneous and heterogeneous metal sulfide minerals.

Acres RG, Harmer SL, Shui HW, Chen CH, Beattie DA.

J Synchrotron Radiat. 2011 Jul;18(Pt 4):649-57. doi: 10.1107/S0909049511007175. Epub 2011 Apr 27.

PMID:
21685683
25.

REVEILLE8 and PSEUDO-REPONSE REGULATOR5 form a negative feedback loop within the Arabidopsis circadian clock.

Rawat R, Takahashi N, Hsu PY, Jones MA, Schwartz J, Salemi MR, Phinney BS, Harmer SL.

PLoS Genet. 2011 Mar;7(3):e1001350. doi: 10.1371/journal.pgen.1001350. Epub 2011 Mar 31.

26.

Genomic analysis of circadian clock-, light-, and growth-correlated genes reveals PHYTOCHROME-INTERACTING FACTOR5 as a modulator of auxin signaling in Arabidopsis.

Nozue K, Harmer SL, Maloof JN.

Plant Physiol. 2011 May;156(1):357-72. doi: 10.1104/pp.111.172684. Epub 2011 Mar 23.

27.

The role of mineral surface chemistry in modified dextrin adsorption.

Beaussart A, Mierczynska-Vasilev AM, Harmer SL, Beattie DA.

J Colloid Interface Sci. 2011 May 15;357(2):510-20. doi: 10.1016/j.jcis.2011.02.017. Epub 2011 Feb 12.

PMID:
21376336
28.

Network quantitative trait loci mapping of circadian clock outputs identifies metabolic pathway-to-clock linkages in Arabidopsis.

Kerwin RE, Jimenez-Gomez JM, Fulop D, Harmer SL, Maloof JN, Kliebenstein DJ.

Plant Cell. 2011 Feb;23(2):471-85. doi: 10.1105/tpc.110.082065. Epub 2011 Feb 22.

29.

XAP5 CIRCADIAN TIMEKEEPER regulates ethylene responses in aerial tissues of Arabidopsis.

Ellison CT, Vandenbussche F, Van Der Straeten D, Harmer SL.

Plant Physiol. 2011 Feb;155(2):988-99. doi: 10.1104/pp.110.164277. Epub 2010 Dec 16.

30.

Jumonji domain protein JMJD5 functions in both the plant and human circadian systems.

Jones MA, Covington MF, DiTacchio L, Vollmers C, Panda S, Harmer SL.

Proc Natl Acad Sci U S A. 2010 Dec 14;107(50):21623-8. doi: 10.1073/pnas.1014204108. Epub 2010 Nov 29.

31.

Synchrotron PEEM and ToF-SIMS study of oxidized heterogeneous pentlandite, pyrrhotite and chalcopyrite.

Acres RG, Harmer SL, Beattie DA.

J Synchrotron Radiat. 2010 Sep;17(5):606-15. doi: 10.1107/S0909049510026749. Epub 2010 Jul 28.

PMID:
20724782
32.

REVEILLE1, a Myb-like transcription factor, integrates the circadian clock and auxin pathways.

Rawat R, Schwartz J, Jones MA, Sairanen I, Cheng Y, Andersson CR, Zhao Y, Ljung K, Harmer SL.

Proc Natl Acad Sci U S A. 2009 Sep 29;106(39):16883-8. doi: 10.1073/pnas.0813035106. Epub 2009 Sep 10.

33.

The circadian system in higher plants.

Harmer SL.

Annu Rev Plant Biol. 2009;60:357-77. doi: 10.1146/annurev.arplant.043008.092054. Review.

PMID:
19575587
34.

Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development.

Covington MF, Maloof JN, Straume M, Kay SA, Harmer SL.

Genome Biol. 2008;9(8):R130. doi: 10.1186/gb-2008-9-8-r130. Epub 2008 Aug 18.

35.

XAP5 CIRCADIAN TIMEKEEPER coordinates light signals for proper timing of photomorphogenesis and the circadian clock in Arabidopsis.

Martin-Tryon EL, Harmer SL.

Plant Cell. 2008 May;20(5):1244-59. doi: 10.1105/tpc.107.056655. Epub 2008 May 30.

36.

The development of protein microarrays and their applications in DNA-protein and protein-protein interaction analyses of Arabidopsis transcription factors.

Gong W, He K, Covington M, Dinesh-Kumar SP, Snyder M, Harmer SL, Zhu YX, Deng XW.

Mol Plant. 2008 Jan;1(1):27-41. doi: 10.1093/mp/ssm009. Epub 2007 Oct 23.

37.

Mechanical stress induces biotic and abiotic stress responses via a novel cis-element.

Walley JW, Coughlan S, Hudson ME, Covington MF, Kaspi R, Banu G, Harmer SL, Dehesh K.

PLoS Genet. 2007 Oct;3(10):1800-12. Epub 2007 Aug 24.

38.
39.

Rhythmic growth explained by coincidence between internal and external cues.

Nozue K, Covington MF, Duek PD, Lorrain S, Fankhauser C, Harmer SL, Maloof JN.

Nature. 2007 Jul 19;448(7151):358-61. Epub 2007 Jun 24.

PMID:
17589502
40.

GIGANTEA regulates phytochrome A-mediated photomorphogenesis independently of its role in the circadian clock.

Oliverio KA, Crepy M, Martin-Tryon EL, Milich R, Harmer SL, Putterill J, Yanovsky MJ, Casal JJ.

Plant Physiol. 2007 May;144(1):495-502. Epub 2007 Mar 23.

41.

GIGANTEA acts in blue light signaling and has biochemically separable roles in circadian clock and flowering time regulation.

Martin-Tryon EL, Kreps JA, Harmer SL.

Plant Physiol. 2007 Jan;143(1):473-86. Epub 2006 Nov 10. Erratum in: Plant Physiol. 2010 May;153(1):364.

42.
43.

Overlapping and distinct roles of PRR7 and PRR9 in the Arabidopsis circadian clock.

Farré EM, Harmer SL, Harmon FG, Yanovsky MJ, Kay SA.

Curr Biol. 2005 Jan 11;15(1):47-54.

44.

Critical role for CCA1 and LHY in maintaining circadian rhythmicity in Arabidopsis.

Alabadí D, Yanovsky MJ, Más P, Harmer SL, Kay SA.

Curr Biol. 2002 Apr 30;12(9):757-61.

45.

Molecular bases of circadian rhythms.

Harmer SL, Panda S, Kay SA.

Annu Rev Cell Dev Biol. 2001;17:215-53. Review.

PMID:
11687489
46.

Orchestrated transcription of key pathways in Arabidopsis by the circadian clock.

Harmer SL, Hogenesch JB, Straume M, Chang HS, Han B, Zhu T, Wang X, Kreps JA, Kay SA.

Science. 2000 Dec 15;290(5499):2110-3.

47.

Microarrays: determining the balance of cellular transcription.

Harmer SL, Kay SA.

Plant Cell. 2000 May;12(5):613-6. No abstract available.

49.
50.

An aspartate/insulin receptor chimera mitogenically activates fibroblasts.

Biemann HP, Harmer SL, Koshland DE Jr.

J Biol Chem. 1996 Nov 1;271(44):27927-30.

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