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Items: 32

1.

Expanding the verrucomicrobial methanotrophic world: description of three novel species of Methylacidimicrobium gen. nov.

van Teeseling MC, Pol A, Harhangi HR, van der Zwart S, Jetten MS, Op den Camp HJ, van Niftrik L.

Appl Environ Microbiol. 2014 Nov;80(21):6782-91. doi: 10.1128/AEM.01838-14. Epub 2014 Aug 29.

2.

An ecogenomic analysis of herbivore-induced plant volatiles in Brassica juncea.

Mathur V, Tytgat TO, Hordijk CA, Harhangi HR, Jansen JJ, Reddy AS, Harvey JA, Vet LE, van Dam NM.

Mol Ecol. 2013 Dec;22(24):6179-96. doi: 10.1111/mec.12555. Epub 2013 Nov 13.

PMID:
24219759
3.

Evidence that the catenane form of CS2 hydrolase is not an artefact.

van Eldijk MB, van Leeuwen I, Mikhailov VA, Neijenhuis L, Harhangi HR, van Hest JC, Jetten MS, Op den Camp HJ, Robinson CV, Mecinović J.

Chem Commun (Camb). 2013 Sep 14;49(71):7770-2. doi: 10.1039/c3cc43219j.

PMID:
23771150
4.

Enrichment of an anammox bacterial community from a flooded paddy soil.

Hu BL, Shen LD, Liu S, Cai C, Chen TT, Kartal B, Harhangi HR, Op den Camp HJ, Lou LP, Xu XY, Zheng P, Jetten MS.

Environ Microbiol Rep. 2013 Jun;5(3):483-9. doi: 10.1111/1758-2229.12038. Epub 2013 Feb 28.

PMID:
23754729
5.

Co-occurrence and distribution of nitrite-dependent anaerobic ammonium and methane-oxidizing bacteria in a paddy soil.

Wang Y, Zhu G, Harhangi HR, Zhu B, Jetten MS, Yin C, Op den Camp HJ.

FEMS Microbiol Lett. 2012 Nov;336(2):79-88. doi: 10.1111/j.1574-6968.2012.02654.x. Epub 2012 Sep 18.

6.

Genome analysis and heterologous expression of acetate-activating enzymes in the anammox bacterium Kuenenia stuttgartiensis.

Russ L, Harhangi HR, Schellekens J, Verdellen B, Kartal B, Op den Camp HJ, Jetten MS.

Arch Microbiol. 2012 Nov;194(11):943-8. doi: 10.1007/s00203-012-0829-7. Epub 2012 Jul 1.

7.

Draft genome sequence of the volcano-inhabiting thermoacidophilic methanotroph Methylacidiphilum fumariolicum strain SolV.

Khadem AF, Wieczorek AS, Pol A, Vuilleumier S, Harhangi HR, Dunfield PF, Kalyuzhnaya MG, Murrell JC, Francoijs KJ, Stunnenberg HG, Stein LY, DiSpirito AA, Semrau JD, Lajus A, Médigue C, Klotz MG, Jetten MS, Op den Camp HJ.

J Bacteriol. 2012 Jul;194(14):3729-30. doi: 10.1128/JB.00501-12.

8.

Hydrazine synthase, a unique phylomarker with which to study the presence and biodiversity of anammox bacteria.

Harhangi HR, Le Roy M, van Alen T, Hu BL, Groen J, Kartal B, Tringe SG, Quan ZX, Jetten MS, Op den Camp HJ.

Appl Environ Microbiol. 2012 Feb;78(3):752-8. doi: 10.1128/AEM.07113-11. Epub 2011 Dec 2.

9.

Anammox bacteria in different compartments of recirculating aquaculture systems.

van Kessel MA, Harhangi HR, Flik G, Jetten MS, Klaren PH, Op den Camp HJ.

Biochem Soc Trans. 2011 Dec;39(6):1817-21. doi: 10.1042/BST20110743. Review.

PMID:
22103532
10.

Molecular mechanism of anaerobic ammonium oxidation.

Kartal B, Maalcke WJ, de Almeida NM, Cirpus I, Gloerich J, Geerts W, Op den Camp HJ, Harhangi HR, Janssen-Megens EM, Francoijs KJ, Stunnenberg HG, Keltjens JT, Jetten MS, Strous M.

Nature. 2011 Oct 2;479(7371):127-30. doi: 10.1038/nature10453.

PMID:
21964329
11.

FACIL: Fast and Accurate Genetic Code Inference and Logo.

Dutilh BE, Jurgelenaite R, Szklarczyk R, van Hijum SA, Harhangi HR, Schmid M, de Wild B, Françoijs KJ, Stunnenberg HG, Strous M, Jetten MS, Op den Camp HJ, Huynen MA.

Bioinformatics. 2011 Jul 15;27(14):1929-33. doi: 10.1093/bioinformatics/btr316. Epub 2011 Jun 8.

12.

Intracellular localization of membrane-bound ATPases in the compartmentalized anammox bacterium 'Candidatus Kuenenia stuttgartiensis'.

van Niftrik L, van Helden M, Kirchen S, van Donselaar EG, Harhangi HR, Webb RI, Fuerst JA, Op den Camp HJ, Jetten MS, Strous M.

Mol Microbiol. 2010 Aug;77(3):701-15. doi: 10.1111/j.1365-2958.2010.07242.x. Epub 2010 Jun 9.

13.

Environmental, genomic and taxonomic perspectives on methanotrophic Verrucomicrobia.

Op den Camp HJ, Islam T, Stott MB, Harhangi HR, Hynes A, Schouten S, Jetten MS, Birkeland NK, Pol A, Dunfield PF.

Environ Microbiol Rep. 2009 Oct;1(5):293-306. doi: 10.1111/j.1758-2229.2009.00022.x. Epub 2009 Mar 3.

PMID:
23765882
14.

Anaerobic oxidation of dimethylsulfide and methanethiol in mangrove sediments is dominated by sulfate-reducing bacteria.

Lyimo TJ, Pol A, Harhangi HR, Jetten MS, Op den Camp HJ.

FEMS Microbiol Ecol. 2009 Dec;70(3):483-92. doi: 10.1111/j.1574-6941.2009.00765.x. Epub 2009 Aug 19.

15.

Cell division ring, a new cell division protein and vertical inheritance of a bacterial organelle in anammox planctomycetes.

van Niftrik L, Geerts WJ, van Donselaar EG, Humbel BM, Webb RI, Harhangi HR, Camp HJ, Fuerst JA, Verkleij AJ, Jetten MS, Strous M.

Mol Microbiol. 2009 Sep;73(6):1009-19. doi: 10.1111/j.1365-2958.2009.06841.x. Epub 2009 Aug 24.

16.

Bacteria associated with iron seeps in a sulfur-rich, neutral pH, freshwater ecosystem.

Haaijer SC, Harhangi HR, Meijerink BB, Strous M, Pol A, Smolders AJ, Verwegen K, Jetten MS, Op den Camp HJ.

ISME J. 2008 Dec;2(12):1231-42. doi: 10.1038/ismej.2008.75. Epub 2008 Aug 28.

PMID:
18754044
17.

A serpin in the cellulosome of the anaerobic fungus Piromyces sp. strain E2.

Steenbakkers PJ, Irving JA, Harhangi HR, Swinkels WJ, Akhmanova A, Dijkerman R, Jetten MS, van der Drift C, Whisstock JC, Op den Camp HJ.

Mycol Res. 2008 Aug;112(Pt 8):999-1006. doi: 10.1016/j.mycres.2008.01.021. Epub 2008 Feb 16.

PMID:
18539447
18.

Methanotrophy below pH 1 by a new Verrucomicrobia species.

Pol A, Heijmans K, Harhangi HR, Tedesco D, Jetten MS, Op den Camp HJ.

Nature. 2007 Dec 6;450(7171):874-8. Epub 2007 Nov 14.

PMID:
18004305
19.

Close relationship of RNase P RNA in Gemmata and anammox planctomycete bacteria.

Butler MK, Op den Camp HJ, Harhangi HR, Lafi FF, Strous M, Fuerst JA.

FEMS Microbiol Lett. 2007 Mar;268(2):244-53. Epub 2007 Jan 10.

20.

Expression and characterisation of a major c-type cytochrome encoded by gene kustc0563 from Kuenenia stuttgartiensis as a recombinant protein in Escherichia coli.

Huston WM, Harhangi HR, Leech AP, Butler CS, Jetten MS, Op den Camp HJ, Moir JW.

Protein Expr Purif. 2007 Jan;51(1):28-33. Epub 2006 Sep 9.

PMID:
17049265
21.

Deciphering the evolution and metabolism of an anammox bacterium from a community genome.

Strous M, Pelletier E, Mangenot S, Rattei T, Lehner A, Taylor MW, Horn M, Daims H, Bartol-Mavel D, Wincker P, Barbe V, Fonknechten N, Vallenet D, Segurens B, Schenowitz-Truong C, Médigue C, Collingro A, Snel B, Dutilh BE, Op den Camp HJ, van der Drift C, Cirpus I, van de Pas-Schoonen KT, Harhangi HR, van Niftrik L, Schmid M, Keltjens J, van de Vossenberg J, Kartal B, Meier H, Frishman D, Huynen MA, Mewes HW, Weissenbach J, Jetten MS, Wagner M, Le Paslier D.

Nature. 2006 Apr 6;440(7085):790-4.

PMID:
16598256
22.

Global impact and application of the anaerobic ammonium-oxidizing (anammox) bacteria.

Op den Camp HJ, Kartal B, Guven D, van Niftrik LA, Haaijer SC, van der Star WR, van de Pas-Schoonen KT, Cabezas A, Ying Z, Schmid MC, Kuypers MM, van de Vossenberg J, Harhangi HR, Picioreanu C, van Loosdrecht MC, Kuenen JG, Strous M, Jetten MS.

Biochem Soc Trans. 2006 Feb;34(Pt 1):174-8. Review.

PMID:
16417514
23.

High-level functional expression of a fungal xylose isomerase: the key to efficient ethanolic fermentation of xylose by Saccharomyces cerevisiae?

Kuyper M, Harhangi HR, Stave AK, Winkler AA, Jetten MS, de Laat WT, den Ridder JJ, Op den Camp HJ, van Dijken JP, Pronk JT.

FEMS Yeast Res. 2003 Oct;4(1):69-78.

24.

Genomic DNA analysis of genes encoding (hemi-)cellulolytic enzymes of the anaerobic fungus Piromyces sp. E2.

Harhangi HR, Akhmanova A, Steenbakkers PJ, Jetten MS, van der Drift C, Op den Camp HJ.

Gene. 2003 Sep 18;314:73-80.

PMID:
14527719
25.

Cel6A, a major exoglucanase from the cellulosome of the anaerobic fungi Piromyces sp. E2 and Piromyces equi.

Harhangi HR, Freelove AC, Ubhayasekera W, van Dinther M, Steenbakkers PJ, Akhmanova A, van der Drift C, Jetten MS, Mowbray SL, Gilbert HJ, Op den Camp HJ.

Biochim Biophys Acta. 2003 Jul 9;1628(1):30-9.

PMID:
12850270
26.

Xylose metabolism in the anaerobic fungus Piromyces sp. strain E2 follows the bacterial pathway.

Harhangi HR, Akhmanova AS, Emmens R, van der Drift C, de Laat WT, van Dijken JP, Jetten MS, Pronk JT, Op den Camp HJ.

Arch Microbiol. 2003 Aug;180(2):134-41. Epub 2003 Jun 13.

PMID:
12811467
27.

The major component of the cellulosomes of anaerobic fungi from the genus Piromyces is a family 48 glycoside hydrolase.

Steenbakkers PJ, Freelove A, Van Cranenbroek B, Sweegers BM, Harhangi HR, Vogels GD, Hazlewood GP, Gilbert HJ, Op den Camp HJ.

DNA Seq. 2002 Dec;13(6):313-20.

PMID:
12652902
28.

beta-Glucosidase in cellulosome of the anaerobic fungus Piromyces sp. strain E2 is a family 3 glycoside hydrolase.

Steenbakkers PJ, Harhangi HR, Bosscher MW, van der Hooft MM, Keltjens JT, van der Drift C, Vogels GD, op den Camp HJ.

Biochem J. 2003 Mar 15;370(Pt 3):963-70.

29.

A highly expressed family 1 beta-glucosidase with transglycosylation capacity from the anaerobic fungus Piromyces sp. E2.

Harhangi HR, Steenbakkers PJ, Akhmanova A, Jetten MS, van der Drift C, Op den Camp HJ.

Biochim Biophys Acta. 2002 Apr 12;1574(3):293-303.

PMID:
11997095
30.

Methanosarcina semesiae sp. nov., a dimethylsulfide-utilizing methanogen from mangrove sediment.

Lyimo TJ, Pol A, Op den Camp HJ, Harhangi HR, Vogels GD.

Int J Syst Evol Microbiol. 2000 Jan;50 Pt 1:171-178. doi: 10.1099/00207713-50-1-171.

PMID:
10826801
31.

Hydrogenosomes: eukaryotic adaptations to anaerobic environments.

Hackstein JH, Akhmanova A, Boxma B, Harhangi HR, Voncken FG.

Trends Microbiol. 1999 Nov;7(11):441-7. Review.

PMID:
10542423
32.

RADHA--a new male germ line-specific chromosomal protein of Drosophila.

Harhangi HR, Sun X, Wang YX, Akhmanova A, Miedema K, Heyting C, Hennig W.

Chromosoma. 1999 Aug;108(4):235-42.

PMID:
10460411

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