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Items: 1 to 50 of 87

1.

Cradles and museums of generic plant diversity across tropical Africa.

Dagallier LMJ, Janssens SB, Dauby G, Blach-Overgaard A, Mackinder BA, Droissart V, Svenning JC, Sosef MSM, Stévart T, Harris DJ, Sonké B, Wieringa JJ, Hardy OJ, Couvreur TLP.

New Phytol. 2019 Oct 30. doi: 10.1111/nph.16293. [Epub ahead of print]

PMID:
31665816
2.

Large-scale genomic sequence data resolve the deepest divergences in the legume phylogeny and support a near-simultaneous evolutionary origin of all six subfamilies.

Koenen EJM, Ojeda DI, Steeves R, Migliore J, Bakker FT, Wieringa JJ, Kidner C, Hardy OJ, Pennington RT, Bruneau A, Hughes CE.

New Phytol. 2019 Oct 30. doi: 10.1111/nph.16290. [Epub ahead of print]

PMID:
31665814
3.

Seed and pollen dispersal distances in two African legume timber trees and their reproductive potential under selective logging.

Hardy OJ, Delaide B, Hainaut H, Gillet JF, Gillet P, Kaymak E, Vankerckhove N, Duminil J, Doucet JL.

Mol Ecol. 2019 Jun;28(12):3119-3134. doi: 10.1111/mec.15138. Epub 2019 Jun 10.

4.

Phylogenomic analyses reveal an exceptionally high number of evolutionary shifts in a florally diverse clade of African legumes.

Ojeda DI, Koenen E, Cervantes S, de la Estrella M, Banguera-Hinestroza E, Janssens SB, Migliore J, Demenou BB, Bruneau A, Forest F, Hardy OJ.

Mol Phylogenet Evol. 2019 Aug;137:156-167. doi: 10.1016/j.ympev.2019.05.002. Epub 2019 May 7.

PMID:
31075505
5.

Comparative analysis of two sister Erythrophleum species (Leguminosae) reveal contrasting transcriptome-wide responses to early drought stress.

Neji M, Gorel A, Ojeda DI, Duminil J, Kastally C, Steppe K, Fayolle A, Hardy OJ.

Gene. 2019 Apr 30;694:50-62. doi: 10.1016/j.gene.2019.01.027. Epub 2019 Feb 1.

6.

The persistence of carbon in the African forest understory.

Hubau W, De Mil T, Van den Bulcke J, Phillips OL, Angoboy Ilondea B, Van Acker J, Sullivan MJP, Nsenga L, Toirambe B, Couralet C, Banin LF, Begne SK, Baker TR, Bourland N, Chezeaux E, Clark CJ, Collins M, Comiskey JA, Cuni-Sanchez A, Deklerck V, Dierickx S, Doucet JL, Ewango CEN, Feldpausch TR, Gilpin M, Gonmadje C, Hall JS, Harris DJ, Hardy OJ, Kamdem MD, Kasongo Yakusu E, Lopez-Gonzalez G, Makana JR, Malhi Y, Mbayu FM, Moore S, Mukinzi J, Pickavance G, Poulsen JR, Reitsma J, Rousseau M, Sonké B, Sunderland T, Taedoumg H, Talbot J, Tshibamba Mukendi J, Umunay PM, Vleminckx J, White LJT, Zemagho L, Lewis SL, Beeckman H.

Nat Plants. 2019 Feb;5(2):133-140. doi: 10.1038/s41477-018-0316-5. Epub 2019 Jan 21.

PMID:
30664730
7.

Taxonomic revision of the African genus Greenwayodendron (Annonaceae).

Lissambou BJ, Hardy OJ, Atteke C, Stevart T, Dauby G, Mbatchi B, Sonke B, Couvreur TLP.

PhytoKeys. 2018 Dec 31;(114):55-93. doi: 10.3897/phytokeys.114.27395. eCollection 2018.

8.

Isolation of microsatellite loci in the African tree species Staudtia kamerunensis (Myristicaceae) using high-throughput sequencing.

Vanden Abeele S, Hardy OJ, Janssens SB.

Mol Biol Rep. 2018 Oct;45(5):1539-1544. doi: 10.1007/s11033-018-4239-z. Epub 2018 Aug 2.

PMID:
30073590
9.

New phylogenetic insights toward developing a natural generic classification of African angraecoid orchids (Vandeae, Orchidaceae).

Simo-Droissart M, Plunkett GM, Droissart V, Edwards MB, Farminhão JNM, Ječmenica V, D'haijère T, Lowry PP 2nd, Sonké B, Micheneau C, Carlsward BS, Azandi L, Verlynde S, Hardy OJ, Martos F, Bytebier B, Fischer E, Stévart T.

Mol Phylogenet Evol. 2018 Sep;126:241-249. doi: 10.1016/j.ympev.2018.04.021. Epub 2018 Apr 16.

PMID:
29673694
10.

History of the fragmentation of the African rain forest in the Dahomey Gap: insight from the demographic history of Terminalia superba.

Demenou BB, Doucet JL, Hardy OJ.

Heredity (Edinb). 2018 Jun;120(6):547-561. doi: 10.1038/s41437-017-0035-0. Epub 2017 Dec 27.

11.

Evolution in the Amphi-Atlantic tropical genus Guibourtia (Fabaceae, Detarioideae), combining NGS phylogeny and morphology.

Tosso F, Hardy OJ, Doucet JL, Daïnou K, Kaymak E, Migliore J.

Mol Phylogenet Evol. 2018 Mar;120:83-93. doi: 10.1016/j.ympev.2017.11.026. Epub 2017 Dec 5.

PMID:
29222064
12.

Pleistocene population expansions of shade-tolerant trees indicate fragmentation of the African rainforest during the Ice Ages.

Piñeiro R, Dauby G, Kaymak E, Hardy OJ.

Proc Biol Sci. 2017 Nov 15;284(1866). pii: 20171800. doi: 10.1098/rspb.2017.1800.

13.

Characterization of microsatellite markers in the African tropical tree species Guibourtia ehie (Fabaceae, Detarioideae).

Tosso F, Doucet JL, Migliore J, Daïnou K, Kaymak E, Kameni FSM, Hardy OJ.

Appl Plant Sci. 2017 Jul 26;5(7). pii: apps.1700023. doi: 10.3732/apps.1700023. eCollection 2017 Jul.

14.

Extensive seed and pollen dispersal and assortative mating in the rain forest tree Entandrophragma cylindricum (Meliaceae) inferred from indirect and direct analyses.

Monthe FK, Hardy OJ, Doucet JL, Loo J, Duminil J.

Mol Ecol. 2017 Oct;26(19):5279-5291. doi: 10.1111/mec.14241. Epub 2017 Sep 5.

PMID:
28734064
15.

Exploring the floristic diversity of tropical Africa.

Sosef MS, Dauby G, Blach-Overgaard A, van der Burgt X, Catarino L, Damen T, Deblauwe V, Dessein S, Dransfield J, Droissart V, Duarte MC, Engledow H, Fadeur G, Figueira R, Gereau RE, Hardy OJ, Harris DJ, de Heij J, Janssens S, Klomberg Y, Ley AC, Mackinder BA, Meerts P, van de Poel JL, Sonké B, Stévart T, Stoffelen P, Svenning JC, Sepulchre P, Zaiss R, Wieringa JJ, Couvreur TL.

BMC Biol. 2017 Mar 7;15(1):15. doi: 10.1186/s12915-017-0356-8.

16.

Characterization of microsatellite markers in two exploited African trees, Entandrophragma candollei and E. utile (Meliaceae).

Monthe FS, Duminil J, Tosso F, Migliore J, Hardy OJ.

Appl Plant Sci. 2017 Feb 9;5(2). pii: apps.1600130. doi: 10.3732/apps.1600130. eCollection 2017 Feb.

17.

RAINBIO: a mega-database of tropical African vascular plants distributions.

Dauby G, Zaiss R, Blach-Overgaard A, Catarino L, Damen T, Deblauwe V, Dessein S, Dransfield J, Droissart V, Duarte MC, Engledow H, Fadeur G, Figueira R, Gereau RE, Hardy OJ, Harris DJ, de Heij J, Janssens S, Klomberg Y, Ley AC, Mackinder BA, Meerts P, van de Poel JL, Sonké B, Sosef MS, Stévart T, Stoffelen P, Svenning JC, Sepulchre P, van der Burgt X, Wieringa JJ, Couvreur TL.

PhytoKeys. 2016 Nov 7;(74):1-18. doi: 10.3897/phytokeys.74.9723. eCollection 2016.

18.

Development, characterization, and cross-amplification of microsatellite markers in the understudied African genus Anthonotha (Fabaceae).

Demenou BB, Hardy OJ.

Appl Plant Sci. 2017 Jan 5;5(1). pii: apps.1600120. doi: 10.3732/apps.1600120. eCollection 2017 Jan.

19.

Revealing hidden species diversity in closely related species using nuclear SNPs, SSRs and DNA sequences - a case study in the tree genus Milicia.

Daïnou K, Blanc-Jolivet C, Degen B, Kimani P, Ndiade-Bourobou D, Donkpegan AS, Tosso F, Kaymak E, Bourland N, Doucet JL, Hardy OJ.

BMC Evol Biol. 2016 Dec 1;16(1):259.

20.

Evolution in African tropical trees displaying ploidy-habitat association: The genus Afzelia (Leguminosae).

Donkpegan ASL, Doucet JL, Migliore J, Duminil J, Dainou K, Piñeiro R, Wieringa JJ, Champluvier D, Hardy OJ.

Mol Phylogenet Evol. 2017 Feb;107:270-281. doi: 10.1016/j.ympev.2016.11.004. Epub 2016 Nov 5.

PMID:
27825871
21.

Development of genomic tools in a widespread tropical tree, Symphonia globulifera L.f.: a new low-coverage draft genome, SNP and SSR markers.

Olsson S, Seoane-Zonjic P, Bautista R, Claros MG, González-Martínez SC, Scotti I, Scotti-Saintagne C, Hardy OJ, Heuertz M.

Mol Ecol Resour. 2017 Jul;17(4):614-630. doi: 10.1111/1755-0998.12605. Epub 2016 Oct 27.

PMID:
27718316
22.

Mitochondrial DNA hyperdiversity and its potential causes in the marine periwinkle Melarhaphe neritoides (Mollusca: Gastropoda).

Fourdrilis S, Mardulyn P, Hardy OJ, Jordaens K, de Frias Martins AM, Backeljau T.

PeerJ. 2016 Oct 5;4:e2549. eCollection 2016.

23.

Microsatellite development for the genus Guibourtia (Fabaceae, Caesalpinioideae) reveals diploid and polyploid species.

Tosso F, Doucet JL, Kaymak E, Daïnou K, Duminil J, Hardy OJ.

Appl Plant Sci. 2016 Jul 13;4(7). pii: apps.1600029. doi: 10.3732/apps.1600029. eCollection 2016 Jul.

24.

Polymorphic microsatellite loci for Haumania danckelmaniana and transferability to H. liebrechtsiana (Marantaceae).

Ley AC, Hardy OJ.

Appl Plant Sci. 2016 Mar 8;4(3). pii: apps.1500116. doi: 10.3732/apps.1500116. eCollection 2016 Mar.

25.

Development and characterization of microsatellite markers in the African deciduous tree Terminalia superba (Combretaceae).

Demenou BB, Migliore J, Tosso F, Kaymak E, Hardy OJ.

Appl Plant Sci. 2015 Dec 9;3(12). pii: apps.1500070. doi: 10.3732/apps.1500070. eCollection 2015 Dec.

26.

Relationships between population density, fine-scale genetic structure, mating system and pollen dispersal in a timber tree from African rainforests.

Duminil J, Daïnou K, Kaviriri DK, Gillet P, Loo J, Doucet JL, Hardy OJ.

Heredity (Edinb). 2016 Mar;116(3):295-303. doi: 10.1038/hdy.2015.101. Epub 2015 Dec 23.

27.

Isolation of nuclear microsatellites in the African timber tree Lophira alata (Ochnaceae) and cross-amplification in L. lanceolata.

Piñeiro R, Staquet A, Hardy OJ.

Appl Plant Sci. 2015 Oct 14;3(10). pii: apps.1500056. doi: 10.3732/apps.1500056. eCollection 2015 Oct.

28.

Population genetics of autopolyploids under a mixed mating model and the estimation of selfing rate.

Hardy OJ.

Mol Ecol Resour. 2016 Jan;16(1):103-17. doi: 10.1111/1755-0998.12431. Epub 2015 Jun 3.

PMID:
25981126
29.

Microsatellite development and flow cytometry in the African tree genus Afzelia (Fabaceae, Caesalpinioideae) reveal a polyploid complex.

Donkpegan AS, Doucet JL, Dainou K, Hardy OJ.

Appl Plant Sci. 2015 Jan 7;3(1). pii: apps.1400097. doi: 10.3732/apps.1400097. eCollection 2015 Jan.

30.

Comparative phylogeography of eight herbs and lianas (Marantaceae) in central African rainforests.

Ley AC, Dauby G, Köhler J, Wypior C, Röser M, Hardy OJ.

Front Genet. 2014 Nov 19;5:403. doi: 10.3389/fgene.2014.00403. eCollection 2014.

31.

Soil charcoal to assess the impacts of past human disturbances on tropical forests.

Vleminckx J, Morin-Rivat J, Biwolé AB, Daïnou K, Gillet JF, Doucet JL, Drouet T, Hardy OJ.

PLoS One. 2014 Nov 12;9(11):e108121. doi: 10.1371/journal.pone.0108121. eCollection 2014.

32.

Comparing phylogeographic hypotheses by simulating DNA sequences under a spatially explicit model of coalescence.

Dellicour S, Kastally C, Hardy OJ, Mardulyn P.

Mol Biol Evol. 2014 Dec;31(12):3359-72. doi: 10.1093/molbev/msu277. Epub 2014 Sep 26.

PMID:
25261404
33.

Characterizing the phylogenetic tree community structure of a protected tropical rain forest area in Cameroon.

Manel S, Couvreur TL, Munoz F, Couteron P, Hardy OJ, Sonké B.

PLoS One. 2014 Jun 17;9(6):e98920. doi: 10.1371/journal.pone.0098920. eCollection 2014.

34.

Contrasting patterns of gene flow between sister plant species in the understorey of African moist forests - the case of sympatric and parapatric Marantaceae species.

Ley AC, Hardy OJ.

Mol Phylogenet Evol. 2014 Aug;77:264-74. doi: 10.1016/j.ympev.2014.04.026. Epub 2014 Apr 30.

PMID:
24792083
35.

Congruent phylogeographical patterns of eight tree species in Atlantic Central Africa provide insights into the past dynamics of forest cover.

Dauby G, Duminil J, Heuertz M, Koffi GK, Stévart T, Hardy OJ.

Mol Ecol. 2014 May;23(9):2299-312. doi: 10.1111/mec.12724. Epub 2014 Apr 21.

PMID:
24655106
36.

Speciation slowing down in widespread and long-living tree taxa: insights from the tropical timber tree genus Milicia (Moraceae).

Daïnou K, Mahy G, Duminil J, Dick CW, Doucet JL, Donkpégan AS, Pluijgers M, Sinsin B, Lejeune P, Hardy OJ.

Heredity (Edinb). 2014 Jul;113(1):74-85. doi: 10.1038/hdy.2014.5. Epub 2014 Feb 19.

37.

Comparative phylogeography in rainforest trees from Lower Guinea, Africa.

Heuertz M, Duminil J, Dauby G, Savolainen V, Hardy OJ.

PLoS One. 2014 Jan 8;9(1):e84307. doi: 10.1371/journal.pone.0084307. eCollection 2014.

38.

Inferring the mode of colonization of the rapid range expansion of a solitary bee from multilocus DNA sequence variation.

Dellicour S, Mardulyn P, Hardy OJ, Hardy C, Roberts SP, Vereecken NJ.

J Evol Biol. 2014 Jan;27(1):116-32. doi: 10.1111/jeb.12280. Epub 2013 Dec 16.

39.
40.

The ancient tropical rainforest tree Symphonia globulifera L. f. (Clusiaceae) was not restricted to postulated Pleistocene refugia in Atlantic Equatorial Africa.

Budde KB, González-Martínez SC, Hardy OJ, Heuertz M.

Heredity (Edinb). 2013 Jul;111(1):66-76. doi: 10.1038/hdy.2013.21. Epub 2013 Apr 10.

41.

How effective are DNA barcodes in the identification of African rainforest trees?

Parmentier I, Duminil J, Kuzmina M, Philippe M, Thomas DW, Kenfack D, Chuyong GB, Cruaud C, Hardy OJ.

PLoS One. 2013;8(4):e54921. doi: 10.1371/journal.pone.0054921. Epub 2013 Apr 2.

42.
43.

Permanent genetic resources added to Molecular Ecology Resources Database 1 August 2012 - 30 September 2012.

Molecular Ecology Resources Primer Development Consortium, Ahanchédé A, Alfaya JE, Andersen LW, Azam D, Bautista MA, Besnard AL, Bigatti G, Bouétard A, Coutellec MA, Ewédjè EE, Fuseya R, García-Jiménez R, Haratian M, Hardy OJ, Holm LE, Hoy CW, Koshimizu E, Loeschcke V, López-Márquez V, Machado CA, Machordom A, Marchi C, Michel AP, Micheneau C, Mittapalli O, Nagai T, Okamoto N, Pan Y, Panitz F, Safaie N, Sakamoto T, Sharifnabi B, Tian EW, Yu H.

Mol Ecol Resour. 2013 Jan;13(1):158-9. doi: 10.1111/1755-0998.12035. Epub 2012 Nov 26.

PMID:
23176377
44.

Phenological patterns in a natural population of a tropical timber tree species, Milicia excelsa (Moraceae): Evidence of isolation by time and its interaction with feeding strategies of dispersers.

Daïnou K, Laurenty E, Mahy G, Hardy OJ, Brostaux Y, Tagg N, Doucet JL.

Am J Bot. 2012 Sep;99(9):1453-63. doi: 10.3732/ajb.1200147. Epub 2012 Aug 21.

45.

Characterization of new microsatellite loci isolated from Santiria trimera (Burseraceae).

Koffi KG, Heuertz M, Jans R, Hardy OJ, Vendramin GG, Duminil J.

Am J Bot. 2012 Aug;99(8):e334-6. doi: 10.3732/ajb.1200041. Epub 2012 Jul 30.

46.

Assessing phylogenetic signal with measurement error: a comparison of Mantel tests, Blomberg et al.'s K, and phylogenetic distograms.

Hardy OJ, Pavoine S.

Evolution. 2012 Aug;66(8):2614-21. doi: 10.1111/j.1558-5646.2012.01623.x. Epub 2012 Apr 9.

PMID:
22834757
47.

Ecophylogenetics: advances and perspectives.

Mouquet N, Devictor V, Meynard CN, Munoz F, Bersier LF, Chave J, Couteron P, Dalecky A, Fontaine C, Gravel D, Hardy OJ, Jabot F, Lavergne S, Leibold M, Mouillot D, Münkemüller T, Pavoine S, Prinzing A, Rodrigues AS, Rohr RP, Thébault E, Thuiller W.

Biol Rev Camb Philos Soc. 2012 Nov;87(4):769-85. doi: 10.1111/j.1469-185X.2012.00224.x. Epub 2012 Mar 20. Review.

PMID:
22432924
48.

Testing species delimitation in sympatric species complexes: the case of an African tropical tree, Carapa spp. (Meliaceae).

Duminil J, Kenfack D, Viscosi V, Grumiau L, Hardy OJ.

Mol Phylogenet Evol. 2012 Jan;62(1):275-85. doi: 10.1016/j.ympev.2011.09.020. Epub 2011 Oct 14.

PMID:
22019936
49.

Development and characterization of microsatellite loci in Pericopsis elata (Fabaceae) using a cost-efficient approach.

Micheneau C, Dauby G, Bourland N, Doucet JL, Hardy OJ.

Am J Bot. 2011 Oct;98(10):e268-70. doi: 10.3732/ajb.1100070. Epub 2011 Sep 16.

50.

spacodiR: structuring of phylogenetic diversity in ecological communities.

Eastman JM, Paine CE, Hardy OJ.

Bioinformatics. 2011 Sep 1;27(17):2437-8. doi: 10.1093/bioinformatics/btr403. Epub 2011 Jul 6.

PMID:
21737436

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