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Items: 1 to 50 of 220

1.

Cas9-guide RNA ribonucleoprotein-induced genome editing in the industrial green alga Coccomyxa sp. strain KJ.

Yoshimitsu Y, Abe J, Harayama S.

Biotechnol Biofuels. 2018 Dec 10;11:326. doi: 10.1186/s13068-018-1327-1. eCollection 2018.

2.

An extracellular [NiFe] hydrogenase mediating iron corrosion is encoded in a genetically unstable genomic island in Methanococcus maripaludis.

Tsurumaru H, Ito N, Mori K, Wakai S, Uchiyama T, Iino T, Hosoyama A, Ataku H, Nishijima K, Mise M, Shimizu A, Harada T, Horikawa H, Ichikawa N, Sekigawa T, Jinno K, Tanikawa S, Yamazaki J, Sasaki K, Yamazaki S, Fujita N, Harayama S.

Sci Rep. 2018 Oct 11;8(1):15149. doi: 10.1038/s41598-018-33541-5.

3.

Metabolic engineering using iterative self-cloning to improve lipid productivity in Coccomyxa.

Kasai Y, Tsukahara T, Ikeda F, Ide Y, Harayama S.

Sci Rep. 2018 Aug 6;8(1):11742. doi: 10.1038/s41598-018-30254-7.

4.

Biofilm-based photobioreactor absorbing water and nutrients by capillary action.

Hamano H, Nakamura S, Hayakawa J, Miyashita H, Harayama S.

Bioresour Technol. 2017 Jan;223:307-311. doi: 10.1016/j.biortech.2016.10.088. Epub 2016 Oct 31.

PMID:
27839679
5.

Construction of Marker-Free Transgenic Strains of Chlamydomonas reinhardtii Using a Cre/loxP-Mediated Recombinase System.

Kasai Y, Harayama S.

PLoS One. 2016 Aug 26;11(8):e0161733. doi: 10.1371/journal.pone.0161733. eCollection 2016.

6.

Severe and Rapid Progression in Very Early-Onset Chronic Granulomatous Disease-Associated Colitis.

Kawai T, Arai K, Harayama S, Nakazawa Y, Goto F, Maekawa T, Tamura E, Uchiyama T, Onodera M.

J Clin Immunol. 2015 Aug;35(6):583-8. doi: 10.1007/s10875-015-0180-2. Epub 2015 Aug 2.

PMID:
26233238
7.

Construction of a self-cloning system in the unicellular green alga Pseudochoricystis ellipsoidea.

Kasai Y, Oshima K, Ikeda F, Abe J, Yoshimitsu Y, Harayama S.

Biotechnol Biofuels. 2015 Jun 30;8:94. doi: 10.1186/s13068-015-0277-0. eCollection 2015.

8.

Iron corrosion induced by nonhydrogenotrophic nitrate-reducing Prolixibacter sp. strain MIC1-1.

Iino T, Ito K, Wakai S, Tsurumaru H, Ohkuma M, Harayama S.

Appl Environ Microbiol. 2015 Mar;81(5):1839-46. doi: 10.1128/AEM.03741-14. Epub 2014 Dec 29.

9.

Corrosion of iron by iodide-oxidizing bacteria isolated from brine in an iodine production facility.

Wakai S, Ito K, Iino T, Tomoe Y, Mori K, Harayama S.

Microb Ecol. 2014 Oct;68(3):519-27. doi: 10.1007/s00248-014-0438-x. Epub 2014 May 27.

PMID:
24863130
10.

Influence of extracellular polysaccharides (EPS) produced by two different green unicellular algae on membrane filtration in an algae-based biofuel production process.

Matsumoto T, Yamamura H, Hayakawa J, Watanabe Y, Harayama S.

Water Sci Technol. 2014;69(9):1919-25. doi: 10.2166/wst.2014.104.

PMID:
24804668
11.

A case of macrophage activation syndrome developing in a patient with chronic granulomatous disease-associated colitis.

Akagi K, Kawai T, Watanabe N, Yokoyama M, Arai K, Harayama S, Oana S, Onodera M.

J Pediatr Hematol Oncol. 2014 Apr;36(3):e169-72. doi: 10.1097/MPH.0b013e31828e5dae.

PMID:
23652865
12.

Thalidomide attenuates excessive inflammation without interrupting lipopolysaccharide-driven inflammatory cytokine production in chronic granulomatous disease.

Kawai T, Watanabe N, Yokoyama M, Arai K, Oana S, Harayama S, Yasui K, Oh-Ishi T, Onodera M.

Clin Immunol. 2013 May;147(2):122-8. doi: 10.1016/j.clim.2013.03.004. Epub 2013 Mar 21.

PMID:
23583898
13.

Genetic transformation of Pseudochoricystis ellipsoidea, an aliphatic hydrocarbon-producing green alga.

Imamura S, Hagiwara D, Suzuki F, Kurano N, Harayama S.

J Gen Appl Microbiol. 2012;58(1):1-10.

14.

Alkane-degrading properties of Dietzia sp. H0B, a key player in the Prestige oil spill biodegradation (NW Spain).

Alonso-GutiƩrrez J, Teramoto M, Yamazoe A, Harayama S, Figueras A, Novoa B.

J Appl Microbiol. 2011 Oct;111(4):800-10. doi: 10.1111/j.1365-2672.2011.05104.x. Epub 2011 Aug 4.

16.

Advances in the field of high-molecular-weight polycyclic aromatic hydrocarbon biodegradation by bacteria.

Kanaly RA, Harayama S.

Microb Biotechnol. 2010 Mar;3(2):136-64. doi: 10.1111/j.1751-7915.2009.00130.x. Epub 2009 Jun 22. Review.

17.

A simple and rapid GC/MS method for the simultaneous determination of gaseous metabolites.

Isobe K, Koba K, Ueda S, Senoo K, Harayama S, Suwa Y.

J Microbiol Methods. 2011 Jan;84(1):46-51. doi: 10.1016/j.mimet.2010.10.009. Epub 2010 Oct 31.

PMID:
20971136
18.

Iron corrosion activity of anaerobic hydrogen-consuming microorganisms isolated from oil facilities.

Mori K, Tsurumaru H, Harayama S.

J Biosci Bioeng. 2010 Oct;110(4):426-30. doi: 10.1016/j.jbiosc.2010.04.012. Epub 2010 May 26.

PMID:
20547365
19.

The potential of Cycloclasticus and Altererythrobacter strains for use in bioremediation of petroleum-aromatic-contaminated tropical marine environments.

Teramoto M, Suzuki M, Hatmanti A, Harayama S.

J Biosci Bioeng. 2010 Jul;110(1):48-52. doi: 10.1016/j.jbiosc.2009.12.008. Epub 2010 Jan 15.

PMID:
20541115
20.

Oleibacter marinus gen. nov., sp. nov., a bacterium that degrades petroleum aliphatic hydrocarbons in a tropical marine environment.

Teramoto M, Ohuchi M, Hatmanti A, Darmayati Y, Widyastuti Y, Harayama S, Fukunaga Y.

Int J Syst Evol Microbiol. 2011 Feb;61(Pt 2):375-380. doi: 10.1099/ijs.0.018671-0. Epub 2010 Mar 19.

PMID:
20305063
21.

Methanobacterium petrolearium sp. nov. and Methanobacterium ferruginis sp. nov., mesophilic methanogens isolated from salty environments.

Mori K, Harayama S.

Int J Syst Evol Microbiol. 2011 Jan;61(Pt 1):138-43. doi: 10.1099/ijs.0.022723-0. Epub 2010 Feb 19.

PMID:
20173004
22.

Iron-corroding methanogen isolated from a crude-oil storage tank.

Uchiyama T, Ito K, Mori K, Tsurumaru H, Harayama S.

Appl Environ Microbiol. 2010 Mar;76(6):1783-8. doi: 10.1128/AEM.00668-09. Epub 2010 Jan 29.

23.

Euzebya tangerina gen. nov., sp. nov., a deeply branching marine actinobacterium isolated from the sea cucumber Holothuria edulis, and proposal of Euzebyaceae fam. nov., Euzebyales ord. nov. and Nitriliruptoridae subclassis nov.

Kurahashi M, Fukunaga Y, Sakiyama Y, Harayama S, Yokota A.

Int J Syst Evol Microbiol. 2010 Oct;60(Pt 10):2314-9. doi: 10.1099/ijs.0.016543-0. Epub 2009 Nov 13.

PMID:
19915105
25.
26.

Serinibacter salmoneus gen. nov., sp. nov., an actinobacterium isolated from the intestinal tract of a fish, and emended descriptions of the families Beutenbergiaceae and Bogoriellaceae.

Hamada M, Iino T, Tamura T, Iwami T, Harayama S, Suzuki K.

Int J Syst Evol Microbiol. 2009 Nov;59(Pt 11):2809-14. doi: 10.1099/ijs.0.011106-0. Epub 2009 Jul 23.

PMID:
19628613
27.

Paraoerskovia marina gen. nov., sp. nov., an actinobacterium isolated from marine sediment.

Khan ST, Harayama S, Tamura T, Ando K, Takagi M, Kazuo SY.

Int J Syst Evol Microbiol. 2009 Aug;59(Pt 8):2094-8. doi: 10.1099/ijs.0.007666-0. Epub 2009 Jul 15.

PMID:
19605707
28.

Oceanobacter-related bacteria are important for the degradation of petroleum aliphatic hydrocarbons in the tropical marine environment.

Teramoto M, Suzuki M, Okazaki F, Hatmanti A, Harayama S.

Microbiology. 2009 Oct;155(Pt 10):3362-70. doi: 10.1099/mic.0.030411-0. Epub 2009 Jun 18.

PMID:
19541999
29.

Physicochemical characters of a tyrosinase inhibitor produced by Streptomyces roseolilacinus NBRC 12815.

Nakashima T, Anzai K, Kuwahara N, Komaki H, Miyadoh S, Harayama S, Tianero MD, Tanaka J, Kanamoto A, Ando K.

Biol Pharm Bull. 2009 May;32(5):832-6.

30.

Iamia majanohamensis gen. nov., sp. nov., an actinobacterium isolated from sea cucumber Holothuria edulis, and proposal of Iamiaceae fam. nov.

Kurahashi M, Fukunaga Y, Sakiyama Y, Harayama S, Yokota A.

Int J Syst Evol Microbiol. 2009 Apr;59(Pt 4):869-73. doi: 10.1099/ijs.0.005611-0.

PMID:
19329622
31.

Lacticigenium naphtae gen. nov., sp. nov., a halotolerant and motile lactic acid bacterium isolated from crude oil.

Iino T, Suzuki K, Harayama S.

Int J Syst Evol Microbiol. 2009 Apr;59(Pt 4):775-80. doi: 10.1099/ijs.0.003293-0.

PMID:
19329605
33.

PCR detection of type I polyketide synthase genes in myxobacteria.

Komaki H, Fudou R, Iizuka T, Nakajima D, Okazaki K, Shibata D, Ojika M, Harayama S.

Appl Environ Microbiol. 2008 Sep;74(17):5571-4. doi: 10.1128/AEM.00224-08. Epub 2008 Jul 7.

34.

Calditerrivibrio nitroreducens gen. nov., sp. nov., a thermophilic, nitrate-reducing bacterium isolated from a terrestrial hot spring in Japan.

Iino T, Nakagawa T, Mori K, Harayama S, Suzuki K.

Int J Syst Evol Microbiol. 2008 Jul;58(Pt 7):1675-9. doi: 10.1099/ijs.0.65714-0.

PMID:
18599715
35.

Fulvibacter tottoriensis gen. nov., sp. nov., a member of the family Flavobacteriaceae isolated from marine sediment.

Khan ST, Nakagawa Y, Harayama S.

Int J Syst Evol Microbiol. 2008 Jul;58(Pt 7):1670-4. doi: 10.1099/ijs.0.65554-0.

PMID:
18599714
36.

Taxonomic distribution of Streptomyces species capable of producing bioactive compounds among strains preserved at NITE/NBRC.

Anzai K, Ohno M, Nakashima T, Kuwahara N, Suzuki R, Tamura T, Komaki H, Miyadoh S, Harayama S, Ando K.

Appl Microbiol Biotechnol. 2008 Aug;80(2):287-95. doi: 10.1007/s00253-008-1510-6. Epub 2008 Jul 2.

PMID:
18594805
37.

Two groups of thermophilic amino acid aminotransferases exhibiting broad substrate specificities for the synthesis of phenylglycine derivatives.

Koma D, Sawai T, Hara R, Harayama S, Kino K.

Appl Microbiol Biotechnol. 2008 Jul;79(5):775-84. doi: 10.1007/s00253-008-1487-1. Epub 2008 May 15.

PMID:
18481057
38.

Complete genome sequence of the soil actinomycete Kocuria rhizophila.

Takarada H, Sekine M, Kosugi H, Matsuo Y, Fujisawa T, Omata S, Kishi E, Shimizu A, Tsukatani N, Tanikawa S, Fujita N, Harayama S.

J Bacteriol. 2008 Jun;190(12):4139-46. doi: 10.1128/JB.01853-07. Epub 2008 Apr 11.

39.

Sneathiella glossodoripedis sp. nov., a marine alphaproteobacterium isolated from the nudibranch Glossodoris cincta, and proposal of Sneathiellales ord. nov. and Sneathiellaceae fam. nov.

Kurahashi M, Fukunaga Y, Harayama S, Yokota A.

Int J Syst Evol Microbiol. 2008 Mar;58(Pt 3):548-52. doi: 10.1099/ijs.0.65328-0.

PMID:
18319453
40.

Paracoccus marinus sp. nov., an adonixanthin diglucoside-producing bacterium isolated from coastal seawater in Tokyo Bay.

Khan ST, Takaichi S, Harayama S.

Int J Syst Evol Microbiol. 2008 Feb;58(Pt 2):383-6. doi: 10.1099/ijs.0.65103-0.

PMID:
18218935
41.

Retrieval of entire genes from environmental DNA by inverse PCR with pre-amplification of target genes using primers containing locked nucleic acids.

Yamada K, Terahara T, Kurata S, Yokomaku T, Tsuneda S, Harayama S.

Environ Microbiol. 2008 Apr;10(4):978-87. Epub 2007 Dec 17.

42.

Diode-pumped 250-W zigzag slab Nd:YAG oscillator amplifier system.

Tei K, Kato M, Niwa Y, Harayama S, Maruyama Y, Matoba T, Arisawa T.

Opt Lett. 1998 Apr 1;23(7):514-6.

PMID:
18084561
43.
44.
45.

A novel nuclear export inhibitor JBIR-02, a new piericidin discovered from Streptomyces sp. ML55.

Ueda JY, Togashi T, Matukura S, Nagai A, Nakashima T, Komaki H, Anzai K, Harayama S, Doi T, Takahashi T, Natsume T, Kisu Y, Goshima N, Nomura N, Takagi M, Shin-Ya K.

J Antibiot (Tokyo). 2007 Jul;60(7):459-62.

PMID:
17721005
46.

A high-throughput and generic assay method for the determination of substrate specificities of thermophilic alpha-aminotransferases.

Sawai T, Koma D, Hara R, Kino K, Harayama S.

J Microbiol Methods. 2007 Oct;71(1):32-8. Epub 2007 Jul 21.

PMID:
17719665
47.

Oscillibacter valericigenes gen. nov., sp. nov., a valerate-producing anaerobic bacterium isolated from the alimentary canal of a Japanese corbicula clam.

Iino T, Mori K, Tanaka K, Suzuki K, Harayama S.

Int J Syst Evol Microbiol. 2007 Aug;57(Pt 8):1840-5.

PMID:
17684268
48.

Sediminitomix flava gen. nov., sp. nov., of the phylum Bacteroidetes, isolated from marine sediment.

Khan ST, Nakagawa Y, Harayama S.

Int J Syst Evol Microbiol. 2007 Aug;57(Pt 8):1689-93.

PMID:
17684238
49.

Nocardia amamiensis sp. nov., isolated from a sugar-cane field in Japan.

Yamamura H, Tamura T, Sakiyama Y, Harayama S.

Int J Syst Evol Microbiol. 2007 Jul;57(Pt 7):1599-602.

PMID:
17625201
50.

Paraferrimonas sedimenticola gen. nov., sp. nov., a marine bacterium of the family Ferrimonadaceae.

Khan ST, Harayama S.

Int J Syst Evol Microbiol. 2007 Jul;57(Pt 7):1493-8.

PMID:
17625182

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