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Items: 29

1.

Chromosome alignment maintenance requires the MAP RECQL4, mutated in the Rothmund-Thomson syndrome.

Yokoyama H, Moreno-Andres D, Astrinidis SA, Hao Y, Weberruss M, Schellhaus AK, Lue H, Haramoto Y, Gruss OJ, Antonin W.

Life Sci Alliance. 2019 Feb 4;2(1). pii: e201800120. doi: 10.26508/lsa.201800120. Print 2019 Feb.

2.

de novo transcription of multiple Hox cluster genes takes place simultaneously in early Xenopus tropicalis embryos.

Kondo M, Matsuo M, Igarashi K, Haramoto Y, Yamamoto T, Yasuoka Y, Taira M.

Biol Open. 2019 Jan 16. pii: bio.038422. doi: 10.1242/bio.038422. [Epub ahead of print]

3.

Genome evolution in the allotetraploid frog Xenopus laevis.

Session AM, Uno Y, Kwon T, Chapman JA, Toyoda A, Takahashi S, Fukui A, Hikosaka A, Suzuki A, Kondo M, van Heeringen SJ, Quigley I, Heinz S, Ogino H, Ochi H, Hellsten U, Lyons JB, Simakov O, Putnam N, Stites J, Kuroki Y, Tanaka T, Michiue T, Watanabe M, Bogdanovic O, Lister R, Georgiou G, Paranjpe SS, van Kruijsbergen I, Shu S, Carlson J, Kinoshita T, Ohta Y, Mawaribuchi S, Jenkins J, Grimwood J, Schmutz J, Mitros T, Mozaffari SV, Suzuki Y, Haramoto Y, Yamamoto TS, Takagi C, Heald R, Miller K, Haudenschild C, Kitzman J, Nakayama T, Izutsu Y, Robert J, Fortriede J, Burns K, Lotay V, Karimi K, Yasuoka Y, Dichmann DS, Flajnik MF, Houston DW, Shendure J, DuPasquier L, Vize PD, Zorn AM, Ito M, Marcotte EM, Wallingford JB, Ito Y, Asashima M, Ueno N, Matsuda Y, Veenstra GJ, Fujiyama A, Harland RM, Taira M, Rokhsar DS.

Nature. 2016 Oct 20;538(7625):336-343. doi: 10.1038/nature19840.

4.

Identification and comparative analyses of Siamois cluster genes in Xenopus laevis and tropicalis.

Haramoto Y, Saijyo T, Tanaka T, Furuno N, Suzuki A, Ito Y, Kondo M, Taira M, Takahashi S.

Dev Biol. 2017 Jun 15;426(2):374-383. doi: 10.1016/j.ydbio.2016.07.015. Epub 2016 Aug 10.

5.

Physicochemical and biological characterizations of Pxt peptides from amphibian (Xenopus tropicalis) skin.

Shigeri Y, Horie M, Yoshida T, Hagihara Y, Imura T, Inagaki H, Haramoto Y, Ito Y, Asashima M.

J Biochem. 2016 Jun;159(6):619-29. doi: 10.1093/jb/mvw003. Epub 2016 Jan 22.

PMID:
26802742
6.

Insulin-like factor regulates neural induction through an IGF1 receptor-independent mechanism.

Haramoto Y, Takahashi S, Oshima T, Onuma Y, Ito Y, Asashima M.

Sci Rep. 2015 Jun 26;5:11603. doi: 10.1038/srep11603.

7.

Complete mitochondrial genome of "Xenopus tropicalis" Asashima line (Anura: Pipidae), a possible undescribed species.

Haramoto Y, Oshima T, Takahashi S, Asashima M, Ito Y, Kurabayashi A.

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3341-3. doi: 10.3109/19401736.2015.1018213. Epub 2015 Feb 25.

PMID:
25714145
8.

Identification of novel peptides from amphibian (Xenopus tropicalis) skin by direct tissue MALDI-MS analysis.

Shigeri Y, Yasuda A, Hagihara Y, Nishi K, Watanabe K, Imura T, Inagaki H, Haramoto Y, Ito Y, Asashima M.

FEBS J. 2015 Jan;282(1):102-13. doi: 10.1111/febs.13107. Epub 2014 Oct 30.

9.

Occupancy of tissue-specific cis-regulatory modules by Otx2 and TLE/Groucho for embryonic head specification.

Yasuoka Y, Suzuki Y, Takahashi S, Someya H, Sudou N, Haramoto Y, Cho KW, Asashima M, Sugano S, Taira M.

Nat Commun. 2014 Jul 9;5:4322. doi: 10.1038/ncomms5322.

10.

Characterization of the insulin-like growth factor binding protein family in Xenopus tropicalis.

Haramoto Y, Oshima T, Takahashi S, Ito Y.

Int J Dev Biol. 2014;58(9):705-11. doi: 10.1387/ijdb.150032yi.

11.

Xnr3 affects brain patterning via cell migration in the neural-epidermal tissue boundary during early Xenopus embryogenesis.

Morita M, Yamashita S, Matsukawa S, Haramoto Y, Takahashi S, Asashima M, Michiue T.

Int J Dev Biol. 2013;57(9-10):779-86. doi: 10.1387/ijdb.130161tm.

12.

Hippo signaling components, Mst1 and Mst2, act as a switch between self-renewal and differentiation in Xenopus hematopoietic and endothelial progenitors.

Nejigane S, Takahashi S, Haramoto Y, Michiue T, Asashima M.

Int J Dev Biol. 2013;57(5):407-14. doi: 10.1387/ijdb.130010st.

13.

[Evaluation of commercial resolution recovery techniques in four state-of-the-art single photon emission computed tomography systems using a digital phantom model].

Onishi H, Motomura N, Fujino K, Natsume T, Haramoto Y.

Nihon Hoshasen Gijutsu Gakkai Zasshi. 2012;68(6):686-96. Japanese.

14.

Quantitative performance of advanced resolution recovery strategies on SPECT images: evaluation with use of digital phantom models.

Onishi H, Motomura N, Fujino K, Natsume T, Haramoto Y.

Radiol Phys Technol. 2013 Jan;6(1):42-53. doi: 10.1007/s12194-012-0168-z. Epub 2012 Jul 13.

PMID:
22791082
15.

The conserved Rieske oxygenase DAF-36/Neverland is a novel cholesterol-metabolizing enzyme.

Yoshiyama-Yanagawa T, Enya S, Shimada-Niwa Y, Yaguchi S, Haramoto Y, Matsuya T, Shiomi K, Sasakura Y, Takahashi S, Asashima M, Kataoka H, Niwa R.

J Biol Chem. 2011 Jul 22;286(29):25756-62. doi: 10.1074/jbc.M111.244384. Epub 2011 Jun 1.

16.

The transcriptional coactivators Yap and TAZ are expressed during early Xenopus development.

Nejigane S, Haramoto Y, Okuno M, Takahashi S, Asashima M.

Int J Dev Biol. 2011;55(1):121-6. doi: 10.1387/ijdb.103130sn.

17.

Zygotic VegT is required for Xenopus paraxial mesoderm formation and is regulated by Nodal signaling and Eomesodermin.

Fukuda M, Takahashi S, Haramoto Y, Onuma Y, Kim YJ, Yeo CY, Ishiura S, Asashima M.

Int J Dev Biol. 2010;54(1):81-92. doi: 10.1387/ijdb.082837mf.

18.

XRASGRP2 is essential for blood vessel formation during Xenopus development.

Suzuki K, Takahashi S, Haramoto Y, Onuma Y, Nagamine K, Okabayashi K, Hashizume K, Iwanaka T, Asashima M.

Int J Dev Biol. 2010;54(4):609-15. doi: 10.1387/ijdb.092929ks.

19.

Bestrophin genes are expressed in Xenopus development.

Onuma Y, Haramoto Y, Nejigane S, Takahashi S, Asashima M.

Biochem Biophys Res Commun. 2009 Jul 3;384(3):290-5. doi: 10.1016/j.bbrc.2009.04.117. Epub 2009 May 4.

PMID:
19406105
20.

The N-terminus zinc finger domain of Xenopus SIP1 is important for neural induction, but not for suppression of Xbra expression.

Nitta KR, Takahashi S, Haramoto Y, Fukuda M, Tanegashima K, Onuma Y, Asashima M.

Int J Dev Biol. 2007;51(4):321-5.

21.

Monomeric mature protein of Nodal-related 3 activates Xbra expression.

Haramoto Y, Takahashi S, Asashima M.

Dev Genes Evol. 2007 Jan;217(1):29-37. Epub 2006 Nov 3.

PMID:
17089091
22.

Expression of Sox1 during Xenopus early embryogenesis.

Nitta KR, Takahashi S, Haramoto Y, Fukuda M, Onuma Y, Asashima M.

Biochem Biophys Res Commun. 2006 Dec 8;351(1):287-93. Epub 2006 Oct 16.

PMID:
17056008
23.

Two distinct domains in pro-region of Nodal-related 3 are essential for BMP inhibition.

Haramoto Y, Takahashi S, Asashima M.

Biochem Biophys Res Commun. 2006 Jul 28;346(2):470-8. Epub 2006 May 30.

PMID:
16762322
24.

Xnr2 and Xnr5 unprocessed proteins inhibit Wnt signaling upstream of dishevelled.

Onuma Y, Takahashi S, Haramoto Y, Tanegashima K, Yokota C, Whitman M, Asashima M.

Dev Dyn. 2005 Dec;234(4):900-10.

25.

Xantivin suppresses the activity of EGF-CFC genes to regulate nodal signaling.

Tanegashima K, Haramoto Y, Yokota C, Takahashi S, Asashima M.

Int J Dev Biol. 2004 Jun;48(4):275-83.

26.

Tracing of Xenopus tropicalis germ plasm and presumptive primordial germ cells with the Xenopus tropicalis DAZ-like gene.

Sekizaki H, Takahashi S, Tanegashima K, Onuma Y, Haramoto Y, Asashima M.

Dev Dyn. 2004 Feb;229(2):367-72.

27.

Xenopus tropicalis nodal-related gene 3 regulates BMP signaling: an essential role for the pro-region.

Haramoto Y, Tanegashima K, Onuma Y, Takahashi S, Sekizaki H, Asashima M.

Dev Biol. 2004 Jan 1;265(1):155-68.

28.

FRL-1, a member of the EGF-CFC family, is essential for neural differentiation in Xenopus early development.

Yabe S, Tanegashima K, Haramoto Y, Takahashi S, Fujii T, Kozuma S, Taketani Y, Asashima M.

Development. 2003 May;130(10):2071-81.

29.

Chromosome mapping of Xenopus tropicalis using the G- and Ag-bands: tandem duplication and polyploidization of larvae heads.

Uehara M, Haramoto Y, Sekizaki H, Takahashi S, Asashima M.

Dev Growth Differ. 2002 Oct;44(5):427-36.

PMID:
12392576

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