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Items: 1 to 50 of 223

1.

Arabidopsis ECHIDNA protein is involved in seed coloration, protein trafficking to vacuoles, and vacuolar biogenesis.

Ichino T, Maeda K, Hara-Nishimura I, Shimada T.

J Exp Bot. 2020 Mar 23. pii: eraa147. doi: 10.1093/jxb/eraa147. [Epub ahead of print]

PMID:
32201898
2.

Excess sterols disrupt plant cellular activity by inducing stress-responsive gene expression.

Shimada TL, Yamaguchi K, Shigenobu S, Takahashi H, Murase M, Fukuyoshi S, Hara-Nishimura I.

J Plant Res. 2020 Mar 17. doi: 10.1007/s10265-020-01181-4. [Epub ahead of print]

PMID:
32185672
3.

A space-saving visual screening method, Glycine max FAST, for generating transgenic soybean.

Iwabuchi K, Shimada TL, Yamada T, Hara-Nishimura I.

Plant Signal Behav. 2020;15(2):1722911. doi: 10.1080/15592324.2020.1722911. Epub 2020 Feb 5.

PMID:
32019401
4.

Endoplasmic reticulum-derived bodies enable a single-cell chemical defense in Brassicaceae plants.

Yamada K, Goto-Yamada S, Nakazaki A, Kunieda T, Kuwata K, Nagano AJ, Nishimura M, Hara-Nishimura I.

Commun Biol. 2020 Jan 14;3(1):21. doi: 10.1038/s42003-019-0739-1.

5.

NAI2 and TSA1 Drive Differentiation of Constitutive and Inducible ER Body Formation in Brassicaceae.

Stefanik N, Bizan J, Wilkens A, Tarnawska-Glatt K, Goto-Yamada S, Strzałka K, Nishimura M, Hara-Nishimura I, Yamada K.

Plant Cell Physiol. 2019 Dec 26. pii: pcz236. doi: 10.1093/pcp/pcz236. [Epub ahead of print]

PMID:
31879762
6.

Sucrose Starvation Induces Microautophagy in Plant Root Cells.

Goto-Yamada S, Oikawa K, Bizan J, Shigenobu S, Yamaguchi K, Mano S, Hayashi M, Ueda H, Hara-Nishimura I, Nishimura M, Yamada K.

Front Plant Sci. 2019 Dec 3;10:1604. doi: 10.3389/fpls.2019.01604. eCollection 2019.

7.

HIGH STEROL ESTER 1 is a key factor in plant sterol homeostasis.

Shimada TL, Shimada T, Okazaki Y, Higashi Y, Saito K, Kuwata K, Oyama K, Kato M, Ueda H, Nakano A, Ueda T, Takano Y, Hara-Nishimura I.

Nat Plants. 2019 Nov;5(11):1154-1166. doi: 10.1038/s41477-019-0537-2. Epub 2019 Nov 11.

PMID:
31712757
8.

Vacuolar processing enzymes in the plant life cycle.

Yamada K, Basak AK, Goto-Yamada S, Tarnawska-Glatt K, Hara-Nishimura I.

New Phytol. 2020 Apr;226(1):21-31. doi: 10.1111/nph.16306. Epub 2019 Dec 7. Review.

PMID:
31679161
9.

Arabidopsis FLYING SAUCER 2 Functions Redundantly with FLY1 to Establish Normal Seed Coat Mucilage.

Kunieda T, Hara-Nishimura I, Demura T, Haughn GW.

Plant Cell Physiol. 2020 Feb 1;61(2):308-317. doi: 10.1093/pcp/pcz195.

PMID:
31626281
10.

Biogenesis of leaf endoplasmic reticulum body is regulated by both jasmonate-dependent and independent pathways.

Nakazaki A, Yamada K, Kunieda T, Tamura K, Hara-Nishimura I, Shimada T.

Plant Signal Behav. 2019;14(8):1622982. doi: 10.1080/15592324.2019.1622982. Epub 2019 May 27.

PMID:
31132914
11.

tRNA Wobble Modification Affects Leaf Cell Development in Arabidopsis thaliana.

Nakai Y, Horiguchi G, Iwabuchi K, Harada A, Nakai M, Hara-Nishimura I, Yano T.

Plant Cell Physiol. 2019 Sep 1;60(9):2026-2039. doi: 10.1093/pcp/pcz064.

PMID:
31076779
12.

Comprehensive nuclear proteome of Arabidopsis obtained by sequential extraction.

Goto C, Hashizume S, Fukao Y, Hara-Nishimura I, Tamura K.

Nucleus. 2019 Dec;10(1):81-92. doi: 10.1080/19491034.2019.1603093.

13.

Identification of Periplasmic Root-Cap Mucilage in Developing Columella Cells of Arabidopsis thaliana.

Maeda K, Kunieda T, Tamura K, Hatano K, Hara-Nishimura I, Shimada T.

Plant Cell Physiol. 2019 Jun 1;60(6):1296-1303. doi: 10.1093/pcp/pcz047.

PMID:
30892660
14.

A Genotypic Comparison Reveals That the Improvement in Nitrogen Remobilization Efficiency in Oilseed Rape Leaves Is Related to Specific Patterns of Senescence-Associated Protease Activities and Phytohormones.

Poret M, Chandrasekar B, van der Hoorn RAL, Déchaumet S, Bouchereau A, Kim TH, Lee BR, Macquart F, Hara-Nishimura I, Avice JC.

Front Plant Sci. 2019 Feb 4;10:46. doi: 10.3389/fpls.2019.00046. eCollection 2019.

15.

Polar Localization of the Borate Exporter BOR1 Requires AP2-Dependent Endocytosis.

Yoshinari A, Hosokawa T, Amano T, Beier MP, Kunieda T, Shimada T, Hara-Nishimura I, Naito S, Takano J.

Plant Physiol. 2019 Apr;179(4):1569-1580. doi: 10.1104/pp.18.01017. Epub 2019 Feb 1.

16.

Leaf Endoplasmic Reticulum Bodies Identified in Arabidopsis Rosette Leaves Are Involved in Defense against Herbivory.

Nakazaki A, Yamada K, Kunieda T, Sugiyama R, Hirai MY, Tamura K, Hara-Nishimura I, Shimada T.

Plant Physiol. 2019 Apr;179(4):1515-1524. doi: 10.1104/pp.18.00984. Epub 2019 Jan 29.

17.

How to Investigate the Role of the Actin-Myosin Cytoskeleton in Organ Straightening.

Ueda H, Hara-Nishimura I.

Methods Mol Biol. 2019;1924:215-221. doi: 10.1007/978-1-4939-9015-3_18.

PMID:
30694479
18.

ANGUSTIFOLIA Regulates Actin Filament Alignment for Nuclear Positioning in Leaves.

Iwabuchi K, Ohnishi H, Tamura K, Fukao Y, Furuya T, Hattori K, Tsukaya H, Hara-Nishimura I.

Plant Physiol. 2019 Jan;179(1):233-247. doi: 10.1104/pp.18.01150. Epub 2018 Nov 7.

19.

Efficient CRISPR/Cas9-based genome editing and its application to conditional genetic analysis in Marchantia polymorpha.

Sugano SS, Nishihama R, Shirakawa M, Takagi J, Matsuda Y, Ishida S, Shimada T, Hara-Nishimura I, Osakabe K, Kohchi T.

PLoS One. 2018 Oct 31;13(10):e0205117. doi: 10.1371/journal.pone.0205117. eCollection 2018.

20.

Endoplasmic Reticulum (ER) Membrane Proteins (LUNAPARKs) are Required for Proper Configuration of the Cortical ER Network in Plant Cells.

Ueda H, Ohta N, Kimori Y, Uchida T, Shimada T, Tamura K, Hara-Nishimura I.

Plant Cell Physiol. 2018 Oct 1;59(10):2166. doi: 10.1093/pcp/pcy192. No abstract available.

PMID:
30295893
21.

Tissue-specific and intracellular localization of indican synthase from Polygonum tinctorium.

Inoue S, Morita R, Kuwata K, Kunieda T, Ueda H, Hara-Nishimura I, Minami Y.

Plant Physiol Biochem. 2018 Nov;132:138-144. doi: 10.1016/j.plaphy.2018.08.034. Epub 2018 Aug 28.

PMID:
30189417
22.

Synaptotagmin-Associated Endoplasmic Reticulum-Plasma Membrane Contact Sites Are Localized to Immobile ER Tubules.

Ishikawa K, Tamura K, Ueda H, Ito Y, Nakano A, Hara-Nishimura I, Shimada T.

Plant Physiol. 2018 Oct;178(2):641-653. doi: 10.1104/pp.18.00498. Epub 2018 Aug 20.

23.

The AP-1 Complex is Required for Proper Mucilage Formation in Arabidopsis Seeds.

Shimada T, Kunieda T, Sumi S, Koumoto Y, Tamura K, Hatano K, Ueda H, Hara-Nishimura I.

Plant Cell Physiol. 2018 Nov 1;59(11):2331-2338. doi: 10.1093/pcp/pcy158.

PMID:
30099531
24.

Pectin RG-I rhamnosyltransferases represent a novel plant-specific glycosyltransferase family.

Takenaka Y, Kato K, Ogawa-Ohnishi M, Tsuruhama K, Kajiura H, Yagyu K, Takeda A, Takeda Y, Kunieda T, Hara-Nishimura I, Kuroha T, Nishitani K, Matsubayashi Y, Ishimizu T.

Nat Plants. 2018 Sep;4(9):669-676. doi: 10.1038/s41477-018-0217-7. Epub 2018 Aug 6.

PMID:
30082766
25.

Stress granule formation is induced by a threshold temperature rather than a temperature difference in Arabidopsis.

Hamada T, Yako M, Minegishi M, Sato M, Kamei Y, Yanagawa Y, Toyooka K, Watanabe Y, Hara-Nishimura I.

J Cell Sci. 2018 Aug 20;131(16). pii: jcs216051. doi: 10.1242/jcs.216051.

26.

Endoplasmic Reticulum (ER) Membrane Proteins (LUNAPARKs) are Required for Proper Configuration of the Cortical ER Network in Plant Cells.

Ueda H, Ohta N, Kimori Y, Uchida T, Shimada T, Tamura K, Hara-Nishimura I.

Plant Cell Physiol. 2018 Oct 1;59(10):1931-1941. doi: 10.1093/pcp/pcy137. Erratum in: Plant Cell Physiol. 2018 Oct 1;59(10):2166.

PMID:
30010972
27.

GREEN FLUORESCENT SEED, to Evaluate Vacuolar Trafficking in Arabidopsis Seeds.

Shimada T, Fuji K, Ichino T, Teh OK, Koumoto Y, Hara-Nishimura I.

Methods Mol Biol. 2018;1789:1-7. doi: 10.1007/978-1-4939-7856-4_1.

PMID:
29916067
28.

The Multifaceted Roles of Plant Vacuoles.

Martinoia E, Mimura T, Hara-Nishimura I, Shiratake K.

Plant Cell Physiol. 2018 Jul 1;59(7):1285-1287. doi: 10.1093/pcp/pcy113. No abstract available.

PMID:
29901752
29.

Specialized Vacuoles of Myrosin Cells: Chemical Defense Strategy in Brassicales Plants.

Shirakawa M, Hara-Nishimura I.

Plant Cell Physiol. 2018 Jul 1;59(7):1309-1316. doi: 10.1093/pcp/pcy082. Review.

PMID:
29897512
30.

Plant Vacuoles.

Shimada T, Takagi J, Ichino T, Shirakawa M, Hara-Nishimura I.

Annu Rev Plant Biol. 2018 Apr 29;69:123-145. doi: 10.1146/annurev-arplant-042817-040508. Epub 2018 Mar 21. Review.

PMID:
29561663
31.

Measurement of the Caspase-1-Like Activity of Vacuolar Processing Enzyme in Plants.

Hatsugai N, Hara-Nishimura I.

Methods Mol Biol. 2018;1743:163-171. doi: 10.1007/978-1-4939-7668-3_15.

PMID:
29332295
32.

Involvement of Adapter Protein Complex 4 in Hypersensitive Cell Death Induced by Avirulent Bacteria.

Hatsugai N, Nakatsuji A, Unten O, Ogasawara K, Kondo M, Nishimura M, Shimada T, Katagiri F, Hara-Nishimura I.

Plant Physiol. 2018 Feb;176(2):1824-1834. doi: 10.1104/pp.17.01610. Epub 2017 Dec 14.

33.

Membrane Dynamics and Multiple Functions of Oil Bodies in Seeds and Leaves.

Shimada TL, Hayashi M, Hara-Nishimura I.

Plant Physiol. 2018 Jan;176(1):199-207. doi: 10.1104/pp.17.01522. Epub 2017 Dec 4. Review. No abstract available.

34.

HSP90 stabilizes auxin receptor TIR1 and ensures plasticity of auxin responses.

Watanabe E, Mano S, Hara-Nishimura I, Nishimura M, Yamada K.

Plant Signal Behav. 2017 May 4;12(5):e1311439. doi: 10.1080/15592324.2017.1311439. Epub 2017 May 22.

35.

Polar Localization of the NIP5;1 Boric Acid Channel Is Maintained by Endocytosis and Facilitates Boron Transport in Arabidopsis Roots.

Wang S, Yoshinari A, Shimada T, Hara-Nishimura I, Mitani-Ueno N, Feng Ma J, Naito S, Takano J.

Plant Cell. 2017 Apr;29(4):824-842. doi: 10.1105/tpc.16.00825. Epub 2017 Mar 24.

36.

The chemical compound bubblin induces stomatal mispatterning in Arabidopsis by disrupting the intrinsic polarity of stomatal lineage cells.

Sakai Y, Sugano SS, Kawase T, Shirakawa M, Imai Y, Kawamoto Y, Sugiyama H, Nakagawa T, Hara-Nishimura I, Shimada T.

Development. 2017 Feb 1;144(3):499-506. doi: 10.1242/dev.145458. Epub 2017 Jan 13.

37.

Nup82 functions redundantly with Nup136 in a salicylic acid-dependent defense response of Arabidopsis thaliana.

Tamura K, Fukao Y, Hatsugai N, Katagiri F, Hara-Nishimura I.

Nucleus. 2017 May 4;8(3):301-311. doi: 10.1080/19491034.2017.1279774. Epub 2017 Jan 10.

38.

HSP90 Stabilizes Auxin-Responsive Phenotypes by Masking a Mutation in the Auxin Receptor TIR1.

Watanabe E, Mano S, Nomoto M, Tada Y, Hara-Nishimura I, Nishimura M, Yamada K.

Plant Cell Physiol. 2016 Nov;57(11):2245-2254. Epub 2016 Oct 22.

PMID:
27816945
39.

Isolation of Protein Storage Vacuoles and Their Membranes.

Shimada T, Hara-Nishimura I.

Methods Mol Biol. 2017;1511:163-168.

PMID:
27730610
40.

PYK10 myrosinase reveals a functional coordination between endoplasmic reticulum bodies and glucosinolates in Arabidopsis thaliana.

Nakano RT, Piślewska-Bednarek M, Yamada K, Edger PP, Miyahara M, Kondo M, Böttcher C, Mori M, Nishimura M, Schulze-Lefert P, Hara-Nishimura I, Bednarek P.

Plant J. 2017 Jan;89(2):204-220. doi: 10.1111/tpj.13377. Epub 2016 Dec 19.

41.

FAMA: A Molecular Link between Stomata and Myrosin Cells.

Shirakawa M, Ueda H, Shimada T, Hara-Nishimura I.

Trends Plant Sci. 2016 Oct;21(10):861-871. doi: 10.1016/j.tplants.2016.07.003. Epub 2016 Jul 29. Review.

PMID:
27477926
42.

Myrosin cells are differentiated directly from ground meristem cells and are developmentally independent of the vasculature in Arabidopsis leaves.

Shirakawa M, Ueda H, Shimada T, Hara-Nishimura I.

Plant Signal Behav. 2016;11(4):e1150403. doi: 10.1080/15592324.2016.1150403.

43.

Decreased Expression of a Gene Caused by a T-DNA Insertion in an Adjacent Gene in Arabidopsis.

Tamura K, Kawabayashi T, Shikanai T, Hara-Nishimura I.

PLoS One. 2016 Feb 1;11(2):e0147911. doi: 10.1371/journal.pone.0147911. eCollection 2016.

44.

The μ Subunit of Arabidopsis Adaptor Protein-2 Is Involved in Effector-Triggered Immunity Mediated by Membrane-Localized Resistance Proteins.

Hatsugai N, Hillmer R, Yamaoka S, Hara-Nishimura I, Katagiri F.

Mol Plant Microbe Interact. 2016 May;29(5):345-51. doi: 10.1094/MPMI-10-15-0228-R. Epub 2016 Mar 29.

45.

Phosphorylation of the C Terminus of RHD3 Has a Critical Role in Homotypic ER Membrane Fusion in Arabidopsis.

Ueda H, Yokota E, Kuwata K, Kutsuna N, Mano S, Shimada T, Tamura K, Stefano G, Fukao Y, Brandizzi F, Shimmen T, Nishimura M, Hara-Nishimura I.

Plant Physiol. 2016 Feb;170(2):867-80. doi: 10.1104/pp.15.01172. Epub 2015 Dec 18.

46.

Plant Nuclei Move to Escape Ultraviolet-Induced DNA Damage and Cell Death.

Iwabuchi K, Hidema J, Tamura K, Takagi S, Hara-Nishimura I.

Plant Physiol. 2016 Feb;170(2):678-85. doi: 10.1104/pp.15.01400. Epub 2015 Dec 17.

47.

[Nucleocytoplasmic transport systems in higher plants].

Tamura K, Hara-Nishimura I.

Seikagaku. 2015 Feb;87(1):34-40. Review. Japanese. No abstract available.

PMID:
26571553
48.

The Adaptor Complex AP-4 Regulates Vacuolar Protein Sorting at the trans-Golgi Network by Interacting with VACUOLAR SORTING RECEPTOR1.

Fuji K, Shirakawa M, Shimono Y, Kunieda T, Fukao Y, Koumoto Y, Takahashi H, Hara-Nishimura I, Shimada T.

Plant Physiol. 2016 Jan;170(1):211-9. doi: 10.1104/pp.15.00869. Epub 2015 Nov 6.

49.

Functions of plant-specific myosin XI: from intracellular motility to plant postures.

Ueda H, Tamura K, Hara-Nishimura I.

Curr Opin Plant Biol. 2015 Dec;28:30-8. doi: 10.1016/j.pbi.2015.08.006. Epub 2015 Sep 30. Review.

PMID:
26432645
50.

An ABC transporter B family protein, ABCB19, is required for cytoplasmic streaming and gravitropism of the inflorescence stems.

Okamoto K, Ueda H, Shimada T, Tamura K, Koumoto Y, Tasaka M, Morita MT, Hara-Nishimura I.

Plant Signal Behav. 2016;11(3):e1010947. doi: 10.1080/15592324.2015.1010947.

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