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Germline Genetic Risk Variants for Progressive Multifocal Leukoencephalopathy.

Eis PS, Bruno CD, Richmond TA, Koralnik IJ, Hanson BA, Major EO, Chow CR, Hendel-Chavez H, Stankoff B, Gasnault J, Taoufik Y, Hatchwell E.

Front Neurol. 2020 Mar 17;11:186. doi: 10.3389/fneur.2020.00186. eCollection 2020.


Comparison of methodological approaches to human gut microbiota changes in response to metabolic and bariatric surgery: A systematic review.

Morales-Marroquin E, Hanson B, Greathouse L, de la Cruz-Munoz N, Messiah SE.

Obes Rev. 2020 Apr 6. doi: 10.1111/obr.13025. [Epub ahead of print] Review.


Ginkgolic acid inhibits fusion of enveloped viruses.

Borenstein R, Hanson BA, Markosyan RM, Gallo ES, Narasipura SD, Bhutta M, Shechter O, Lurain NS, Cohen FS, Al-Harthi L, Nicholson DA.

Sci Rep. 2020 Mar 16;10(1):4746. doi: 10.1038/s41598-020-61700-0.


Molecular and clinical epidemiology of carbapenem-resistant Enterobacterales in the USA (CRACKLE-2): a prospective cohort study.

van Duin D, Arias CA, Komarow L, Chen L, Hanson BM, Weston G, Cober E, Garner OB, Jacob JT, Satlin MJ, Fries BC, Garcia-Diaz J, Doi Y, Dhar S, Kaye KS, Earley M, Hujer AM, Hujer KM, Domitrovic TN, Shropshire WC, Dinh A, Manca C, Luterbach CL, Wang M, Paterson DL, Banerjee R, Patel R, Evans S, Hill C, Arias R, Chambers HF, Fowler VG Jr, Kreiswirth BN, Bonomo RA; Multi-Drug Resistant Organism Network Investigators.

Lancet Infect Dis. 2020 Mar 6. pii: S1473-3099(19)30755-8. doi: 10.1016/S1473-3099(19)30755-8. [Epub ahead of print]


Surface Ki-67 Expression Improves Reproducibility of Dysplasia Diagnosis in Barrett's Esophagus.

Yousaf H, Hayat U, Manivel J, Iwamoto C, Peltola J, Hanson B, Larson W, Dachel S, Gravely A, Mesa H.

Am J Clin Pathol. 2020 Feb 20. pii: aqaa004. doi: 10.1093/ajcp/aqaa004. [Epub ahead of print]


Complex Interaction Between Low-Frequency APD Oscillations and Beat-to-Beat APD Variability in Humans Is Governed by the Sympathetic Nervous System.

Duijvenboden SV, Porter B, Pueyo E, Sampedro-Puente DA, Fernandez-Bes J, Sidhu B, Gould J, Orini M, Bishop MJ, Hanson B, Lambiase P, Razavi R, Rinaldi CA, Gill JS, Taggart P.

Front Physiol. 2020 Jan 22;10:1582. doi: 10.3389/fphys.2019.01582. eCollection 2019.


Continuum mechanical parameterisation of cytoplasmic dynein from atomistic simulation.

Hanson BS, Iida S, Read DJ, Harlen OG, Kurisu G, Nakamura H, Harris SA.

Methods. 2020 Jan 30. pii: S1046-2023(19)30244-0. doi: 10.1016/j.ymeth.2020.01.021. [Epub ahead of print]


Tools for Analysis of the Microbiome.

Galloway-Peña J, Hanson B.

Dig Dis Sci. 2020 Mar;65(3):674-685. doi: 10.1007/s10620-020-06091-y. Review.


Preventing opioid overdose with peer-administered naloxone: findings from a rural state.

Hanson BL, Porter RR, Zöld AL, Terhorst-Miller H.

Harm Reduct J. 2020 Jan 9;17(1):4. doi: 10.1186/s12954-019-0352-0.


Vascular function is related to blood flow during high-intensity, but not low-intensity, knee extension exercise.

Hanson BE, Proffit M, Gifford JR.

J Appl Physiol (1985). 2020 Mar 1;128(3):698-708. doi: 10.1152/japplphysiol.00671.2019. Epub 2020 Jan 9.


New statistical method identifies cytokines that distinguish stool microbiomes.

Yang D, Johnson J, Zhou X, Deych E, Shands B, Hanson B, Sodergren E, Weinstock G, Shannon WD.

Sci Rep. 2019 Dec 27;9(1):20082. doi: 10.1038/s41598-019-56397-9.


Long-Term Compassionate Use of Cefiderocol To Treat Chronic Osteomyelitis Caused by Extensively Drug-Resistant Pseudomonas aeruginosa and Extended-Spectrum-β-Lactamase-Producing Klebsiella pneumoniae in a Pediatric Patient.

Alamarat ZI, Babic J, Tran TT, Wootton SH, Dinh AQ, Miller WR, Hanson B, Wanger A, Gary JL, Arias CA, Pérez N.

Antimicrob Agents Chemother. 2020 Mar 24;64(4). pii: e01872-19. doi: 10.1128/AAC.01872-19. Print 2020 Mar 24.


Hair eruption initiates and commensal skin microbiota aggravate adverse events of anti-EGFR therapy.

Klufa J, Bauer T, Hanson B, Herbold C, Starkl P, Lichtenberger B, Srutkova D, Schulz D, Vujic I, Mohr T, Rappersberger K, Bodenmiller B, Kozakova H, Knapp S, Loy A, Sibilia M.

Sci Transl Med. 2019 Dec 11;11(522). pii: eaax2693. doi: 10.1126/scitranslmed.aax2693.


Nano-encapsulated Escherichia coli Divisome Anchor ZipA, and in Complex with FtsZ.

Lee SC, Collins R, Lin YP, Jamshad M, Broughton C, Harris SA, Hanson BS, Tognoloni C, Parslow RA, Terry AE, Rodger A, Smith CJ, Edler KJ, Ford R, Roper DI, Dafforn TR.

Sci Rep. 2019 Dec 10;9(1):18712. doi: 10.1038/s41598-019-54999-x.


Isolated testicular vasculitis due to immune checkpoint inhibitor.

Weiner R, Hanson B, Rehman J, Sun B.

Eur J Rheumatol. 2019 Nov 25;7(1):35-36. doi: 10.5152/eurjrheum.2019.19061. Print 2020 Jan. Review.


Unexpected relationships between frequency of antimicrobial resistance, disease phenotype and emm type in group A Streptococcus.

Sanson MA, Macias OR, Shah BJ, Hanson B, Vega LA, Alamarat Z, Flores AR.

Microb Genom. 2019 Nov;5(11). doi: 10.1099/mgen.0.000316.


Evaluation of the reentry vulnerability index to predict ventricular tachycardia circuits using high-density contact mapping.

Orini M, Graham AJ, Srinivasan NT, Campos FO, Hanson BM, Chow A, Hunter RJ, Schilling RJ, Finlay M, Earley MJ, Sporton S, Dhinoja M, Lowe M, Porter B, Child N, Rinaldi CA, Gill J, Bishop M, Taggart P, Lambiase PD.

Heart Rhythm. 2020 Apr;17(4):576-583. doi: 10.1016/j.hrthm.2019.11.013. Epub 2019 Nov 18.


Commentary on: Optimizing Breast Pocket Irrigation: The Breast Implant-Associated Anaplastic Large Cell Lymphoma (BIA-ALCL) Era.

Walker JN, Hanson BM, Myckatyn TM.

Aesthet Surg J. 2019 Nov 19. pii: sjz269. doi: 10.1093/asj/sjz269. [Epub ahead of print] No abstract available.


Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis.

Johnson JS, Spakowicz DJ, Hong BY, Petersen LM, Demkowicz P, Chen L, Leopold SR, Hanson BM, Agresta HO, Gerstein M, Sodergren E, Weinstock GM.

Nat Commun. 2019 Nov 6;10(1):5029. doi: 10.1038/s41467-019-13036-1.


Simultaneous Infection with Enterobacteriaceae and Pseudomonas aeruginosa Harboring Multiple Carbapenemases in a Returning Traveler Colonized with Candida auris.

Khan A, Shropshire WC, Hanson B, Dinh AQ, Wanger A, Ostrosky-Zeichner L, Arias CA, Miller WR.

Antimicrob Agents Chemother. 2020 Jan 27;64(2). pii: e01466-19. doi: 10.1128/AAC.01466-19. Print 2020 Jan 27.


The hierarchical emergence of worm-like chain behaviour from globular domain polymer chains.

Hanson BS, Head D, Dougan L.

Soft Matter. 2019 Nov 21;15(43):8778-8789. doi: 10.1039/c9sm01656b. Epub 2019 Oct 9.


Promoting Family Engagement in the ICU: Experience From a National Collaborative of 63 ICUs.

Kleinpell R, Zimmerman J, Vermoch KL, Harmon LA, Vondracek H, Hamilton R, Hanson B, Hwang DY.

Crit Care Med. 2019 Dec;47(12):1692-1698. doi: 10.1097/CCM.0000000000004009.


Analysis of Sinonasal Microbiota in Exacerbations of Chronic Rhinosinusitis Subgroups.

Vandelaar LJ, Hanson B, Marino M, Yao WC, Luong AU, Arias CA, Ramakrishnan V, Citardi MJ.

OTO Open. 2019 Sep 17;3(3):2473974X19875100. doi: 10.1177/2473974X19875100. eCollection 2019 Jul-Sep.


Release of updated International Dysphagia Diet Standardisation Initiative Framework (IDDSI 2.0).

Cichero JAY, Lam PTL, Chen J, Dantas RO, Duivestein J, Hanson B, Kayashita J, Pillay M, Riquelme LF, Steele CM, Vanderwegen J.

J Texture Stud. 2020 Feb;51(1):195-196. doi: 10.1111/jtxs.12481. Epub 2019 Oct 2. No abstract available.


The impact of modification techniques on the rheological properties of dysphagia foods and liquids.

de Villiers M, Hanson B, Moodley L, Pillay M.

J Texture Stud. 2020 Feb;51(1):154-168. doi: 10.1111/jtxs.12476. Epub 2019 Sep 1.


Simplified Mass Spectrometric Analysis of Ceramides using a Common Collision Energy.

Picklo MJ, Hanson BK, Bukowski MR.

Lipids. 2019 Aug;54(8):471-477. doi: 10.1002/lipd.12179. Epub 2019 Jul 24.


Insights into the Microbiome of Breast Implants and Periprosthetic Tissue in Breast Implant-Associated Anaplastic Large Cell Lymphoma.

Walker JN, Hanson BM, Pinkner CL, Simar SR, Pinkner JS, Parikh R, Clemens MW, Hultgren SJ, Myckatyn TM.

Sci Rep. 2019 Jul 17;9(1):10393. doi: 10.1038/s41598-019-46535-8.


Characterisation of a human antibody that potentially links cytomegalovirus infection with systemic lupus erythematosus.

Neo JYJ, Wee SYK, Bonne I, Tay SH, Raida M, Jovanovic V, Fairhurst AM, Lu J, Hanson BJ, MacAry PA.

Sci Rep. 2019 Jul 10;9(1):9998. doi: 10.1038/s41598-019-46329-y.


Extensively Drug-Resistant Pseudomonas aeruginosa ST309 Harboring Tandem Guiana Extended Spectrum β-Lactamase Enzymes: A Newly Emerging Threat in the United States.

Khan A, Tran TT, Rios R, Hanson B, Shropshire WC, Sun Z, Diaz L, Dinh AQ, Wanger A, Ostrosky-Zeichner L, Palzkill T, Arias CA, Miller WR.

Open Forum Infect Dis. 2019 Jun 6;6(7):ofz273. doi: 10.1093/ofid/ofz273. eCollection 2019 Jul.


A comparison of the relative efficiency of ICSI and extended culture with epididymal sperm versus testicular sperm in patients with obstructive azoospermia.

Morin SJ, Hanson BM, Juneau CR, Neal SA, Landis JN, Scott RT, Hotaling JM.

Asian J Androl. 2020 Mar-Apr;22(2):222-226. doi: 10.4103/aja.aja_58_19.


Persistent confirmed low-grade dysplasia in Barrett's esophagus is a risk factor for progression to high-grade dysplasia and adenocarcinoma in a US Veterans cohort.

Song KY, Henn AJ, Gravely AA, Mesa H, Sultan S, Shaheen NJ, Shaukat A, Hanson BJ.

Dis Esophagus. 2020 Mar 5;33(2). pii: doz061. doi: 10.1093/dote/doz061.


Experimental and Computational Investigation of the IDDSI Flow Test of Liquids Used in Dysphagia Management.

Hanson B, Jamshidi R, Redfearn A, Begley R, Steele CM.

Ann Biomed Eng. 2019 Nov;47(11):2296-2307. doi: 10.1007/s10439-019-02308-y. Epub 2019 Jun 19.


The repair of horizontal cleavage tears yields higher complication rates compared to meniscectomy: a systematic review.

Shanmugaraj A, Tejpal T, Ekhtiari S, Gohal C, Horner N, Hanson B, Khan M, Bhandari M.

Knee Surg Sports Traumatol Arthrosc. 2020 Mar;28(3):915-925. doi: 10.1007/s00167-019-05557-5. Epub 2019 Jun 11.


Make scientific data FAIR.

Stall S, Yarmey L, Cutcher-Gershenfeld J, Hanson B, Lehnert K, Nosek B, Parsons M, Robinson E, Wyborn L.

Nature. 2019 Jun;570(7759):27-29. doi: 10.1038/d41586-019-01720-7. No abstract available.


Parental support for sun-protection policies in schools: A cross-sectional analysis.

Kozlowski A, Dodd E, Hanson B, Lazovich D, Polcari I.

J Am Acad Dermatol. 2019 Dec;81(6):1420-1423. doi: 10.1016/j.jaad.2019.05.060. Epub 2019 May 29. No abstract available.


Longitudinal multi-omics of host-microbe dynamics in prediabetes.

Zhou W, Sailani MR, Contrepois K, Zhou Y, Ahadi S, Leopold SR, Zhang MJ, Rao V, Avina M, Mishra T, Johnson J, Lee-McMullen B, Chen S, Metwally AA, Tran TDB, Nguyen H, Zhou X, Albright B, Hong BY, Petersen L, Bautista E, Hanson B, Chen L, Spakowicz D, Bahmani A, Salins D, Leopold B, Ashland M, Dagan-Rosenfeld O, Rego S, Limcaoco P, Colbert E, Allister C, Perelman D, Craig C, Wei E, Chaib H, Hornburg D, Dunn J, Liang L, Rose SMS, Kukurba K, Piening B, Rost H, Tse D, McLaughlin T, Sodergren E, Weinstock GM, Snyder M.

Nature. 2019 May;569(7758):663-671. doi: 10.1038/s41586-019-1236-x. Epub 2019 May 29.


Role of Glutamine Synthetase Isogenes and Herbicide Metabolism in the Mechanism of Resistance to Glufosinate in Lolium perenne L. spp. multiflorum Biotypes from Oregon.

Brunharo CACG, Takano HK, Mallory-Smith CA, Dayan FE, Hanson BD.

J Agric Food Chem. 2019 Aug 7;67(31):8431-8440. doi: 10.1021/acs.jafc.9b01392. Epub 2019 May 26.


Progressive multifocal leukoencephalopathy in Zambia is caused by JC virus with prototype regulatory region.

Mubanga E, Patel A, Siddiqi OK, Hanson BA, Dang X, Lakhi S, Mulundu G, Bender N, Koralnik IJ.

J Neurovirol. 2019 Aug;25(4):475-479. doi: 10.1007/s13365-019-00746-x. Epub 2019 Apr 26.


Characterizing the clinical implementation of a novel activation-repolarization metric to identify targets for catheter ablation of ventricular tachycardias using computational models.

Campos FO, Orini M, Taggart P, Hanson B, Lambiase PD, Porter B, Rinaldi CA, Gill J, Bishop MJ.

Comput Biol Med. 2019 May;108:263-275. doi: 10.1016/j.compbiomed.2019.03.018. Epub 2019 Mar 23.


Mucispirillum schaedleri Antagonizes Salmonella Virulence to Protect Mice against Colitis.

Herp S, Brugiroux S, Garzetti D, Ring D, Jochum LM, Beutler M, Eberl C, Hussain S, Walter S, Gerlach RG, Ruscheweyh HJ, Huson D, Sellin ME, Slack E, Hanson B, Loy A, Baines JF, Rausch P, Basic M, Bleich A, Berry D, Stecher B.

Cell Host Microbe. 2019 May 8;25(5):681-694.e8. doi: 10.1016/j.chom.2019.03.004. Epub 2019 Apr 18.


The effect of the speed and range of motion of movement on the hyperemic response to passive leg movement.

Gifford JR, Bloomfield T, Davis T, Addington A, McMullin E, Wallace T, Proffit M, Hanson B.

Physiol Rep. 2019 Apr;7(8):e14064. doi: 10.14814/phy2.14064.


AO Patient Outcomes Center: Design, Implementation, and Evaluation of a Software Application for the Collection of Patient-Reported Outcome Measures in Orthopedic Outpatient Clinics.

Rothrock NE, Bass M, Blumenthal A, Gershon RC, Hanson B, Joeris A, Kaat A, Morrison S, O'Toole RV, Patel S, Stover M, Weaver MJ, White R, Varela Diaz M, Vrahas MS.

JMIR Form Res. 2019 Apr 12;3(2):e10880. doi: 10.2196/10880.


Modulation of Tongue Pressure According to Liquid Flow Properties in Healthy Swallowing.

Steele CM, Peladeau-Pigeon M, Barbon CAE, Guida BT, Tapson MS, Valenzano TJ, Waito AA, Wolkin TS, Hanson B, Ong JJ, Duizer LM.

J Speech Lang Hear Res. 2019 Jan 30;62(1):22-33. doi: 10.1044/2018_JSLHR-S-18-0229.


Extracellular microRNAs exhibit sequence-dependent stability and cellular release kinetics.

Coenen-Stass AML, Pauwels MJ, Hanson B, Martin Perez C, Conceição M, Wood MJA, Mäger I, Roberts TC.

RNA Biol. 2019 May;16(5):696-706. doi: 10.1080/15476286.2019.1582956. Epub 2019 Mar 5.


Defining the structural basis for human alloantibody binding to human leukocyte antigen allele HLA-A*11:01.

Gu Y, Wong YH, Liew CW, Chan CEZ, Murali TM, Yap J, Too CT, Purushotorman K, Hamidinia M, El Sahili A, Goh ATH, Teo RZC, Wood KJ, Hanson BJ, Gascoigne NRJ, Lescar J, Vathsala A, MacAry PA.

Nat Commun. 2019 Feb 21;10(1):893. doi: 10.1038/s41467-019-08790-1.


Increased temperatures and elevated CO2 levels reduce the sensitivity of Conyza canadensis and Chenopodium album to glyphosate.

Matzrafi M, Brunharo C, Tehranchian P, Hanson BD, Jasieniuk M.

Sci Rep. 2019 Feb 18;9(1):2228. doi: 10.1038/s41598-019-38729-x.


Pulse Arrival Time and Pulse Interval as Accurate Markers to Detect Mechanical Alternans.

van Duijvenboden S, Hanson B, Child N, Lambiase PD, Rinaldi CA, Jaswinder G, Taggart P, Orini M.

Ann Biomed Eng. 2019 May;47(5):1291-1299. doi: 10.1007/s10439-019-02221-4. Epub 2019 Feb 12.


Mechanistic insights from targeted molecular profiling of repolarization alternans in the intact human heart.

Orini M, Yanni J, Taggart P, Hanson B, Hayward M, Smith A, Zhang H, Colman M, Jones G, Jie X, Dobrzynski H, Boyett MR, Lambiase PD.

Europace. 2019 Jun 1;21(6):981-989. doi: 10.1093/europace/euz007.


In Vitro Oral Cavity Model for Screening the Disintegration Behavior of Orodispersible Films: A Bespoke Design.

Redfearn A, Scarpa M, Orlu M, Hanson B.

J Pharm Sci. 2019 May;108(5):1831-1836. doi: 10.1016/j.xphs.2018.12.025. Epub 2019 Jan 11.


A microbial-based cancer vaccine for induction of EGFRvIII-specific CD8+ T cells and anti-tumor immunity.

Zebertavage L, Bambina S, Shugart J, Alice A, Zens KD, Lauer P, Hanson B, Gough MJ, Crittenden MR, Bahjat KS.

PLoS One. 2019 Jan 2;14(1):e0209153. doi: 10.1371/journal.pone.0209153. eCollection 2019.

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