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Items: 23

1.

Evaluating Imputation Algorithms for Low-Depth Genotyping-By-Sequencing (GBS) Data.

Chan AW, Hamblin MT, Jannink JL.

PLoS One. 2016 Aug 18;11(8):e0160733. doi: 10.1371/journal.pone.0160733. eCollection 2016.

2.

Identification and distribution of the NBS-LRR gene family in the Cassava genome.

Lozano R, Hamblin MT, Prochnik S, Jannink JL.

BMC Genomics. 2015 May 7;16:360. doi: 10.1186/s12864-015-1554-9.

3.

Association mapping provides insights into the origin and the fine structure of the sorghum aluminum tolerance locus, AltSB.

Caniato FF, Hamblin MT, Guimaraes CT, Zhang Z, Schaffert RE, Kochian LV, Magalhaes JV.

PLoS One. 2014 Jan 30;9(1):e87438. doi: 10.1371/journal.pone.0087438. eCollection 2014.

4.

High-resolution mapping of resistance to cassava mosaic geminiviruses in cassava using genotyping-by-sequencing and its implications for breeding.

Rabbi IY, Hamblin MT, Kumar PL, Gedil MA, Ikpan AS, Jannink JL, Kulakow PA.

Virus Res. 2014 Jun 24;186:87-96. doi: 10.1016/j.virusres.2013.12.028. Epub 2013 Dec 31.

5.

A candidate gene based approach validates Md-PG1 as the main responsible for a QTL impacting fruit texture in apple (Malus x domestica Borkh).

Longhi S, Hamblin MT, Trainotti L, Peace CP, Velasco R, Costa F.

BMC Plant Biol. 2013 Mar 4;13:37. doi: 10.1186/1471-2229-13-37.

6.

Population genetics of genomics-based crop improvement methods.

Hamblin MT, Buckler ES, Jannink JL.

Trends Genet. 2011 Mar;27(3):98-106. doi: 10.1016/j.tig.2010.12.003. Epub 2011 Jan 10. Review.

PMID:
21227531
7.

Performance of single nucleotide polymorphisms versus haplotypes for genome-wide association analysis in barley.

Lorenz AJ, Hamblin MT, Jannink JL.

PLoS One. 2010 Nov 22;5(11):e14079. doi: 10.1371/journal.pone.0014079.

8.

Positively selected disease response orthologous gene sets in the cereals identified using Sorghum bicolor L. Moench expression profiles and comparative genomics.

Zamora A, Sun Q, Hamblin MT, Aquadro CF, Kresovich S.

Mol Biol Evol. 2009 Sep;26(9):2015-30. doi: 10.1093/molbev/msp114. Epub 2009 Jun 8.

10.

Challenges of detecting directional selection after a bottleneck: lessons from Sorghum bicolor.

Hamblin MT, Casa AM, Sun H, Murray SC, Paterson AH, Aquadro CF, Kresovich S.

Genetics. 2006 Jun;173(2):953-64. Epub 2006 Mar 17.

11.

Equilibrium processes cannot explain high levels of short- and medium-range linkage disequilibrium in the domesticated grass Sorghum bicolor.

Hamblin MT, Salas Fernandez MG, Casa AM, Mitchell SE, Paterson AH, Kresovich S.

Genetics. 2005 Nov;171(3):1247-56. Epub 2005 Sep 12.

12.

Diversity and selection in sorghum: simultaneous analyses using simple sequence repeats.

Casa AM, Mitchell SE, Hamblin MT, Sun H, Bowers JE, Paterson AH, Aquadro CF, Kresovich S.

Theor Appl Genet. 2005 Jun;111(1):23-30. Epub 2005 Apr 28.

PMID:
15864526
13.

Comparative population genetics of the panicoid grasses: sequence polymorphism, linkage disequilibrium and selection in a diverse sample of sorghum bicolor.

Hamblin MT, Mitchell SE, White GM, Gallego J, Kukatla R, Wing RA, Paterson AH, Kresovich S.

Genetics. 2004 May;167(1):471-83.

14.

Molecular evolution of the phytochrome gene family in sorghum: changing rates of synonymous and replacement evolution.

White GM, Hamblin MT, Kresovich S.

Mol Biol Evol. 2004 Apr;21(4):716-23. Epub 2004 Feb 12.

PMID:
14963106
15.

Complex signatures of natural selection at the Duffy blood group locus.

Hamblin MT, Thompson EE, Di Rienzo A.

Am J Hum Genet. 2002 Feb;70(2):369-83. Epub 2001 Dec 20.

16.

Excess of rare amino acid polymorphisms in the Toll-like receptor 4 in humans.

Smirnova I, Hamblin MT, McBride C, Beutler B, Di Rienzo A.

Genetics. 2001 Aug;158(4):1657-64.

17.

Detection of the signature of natural selection in humans: evidence from the Duffy blood group locus.

Hamblin MT, Di Rienzo A.

Am J Hum Genet. 2000 May;66(5):1669-79. Epub 2000 Apr 12. Erratum in: Am J Hum Genet 2002 Jan;70(1):284.

22.

Structure, expression, and hormonal control of genes from the mosquito, Aedes aegypti, which encode proteins similar to the vitelline membrane proteins of Drosophila melanogaster.

Lin Y, Hamblin MT, Edwards MJ, Barillas-Mury C, Kanost MR, Knipple DC, Wolfner MF, Hagedorn HH.

Dev Biol. 1993 Feb;155(2):558-68.

PMID:
8432405
23.

The vitellogenin gene family of Aedes aegypti.

Hamblin MT, Marx JL, Wolfner MF, Hagedorn HH.

Mem Inst Oswaldo Cruz. 1987;82 Suppl 3:109-14.

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