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Items: 1 to 50 of 169

1.

Quantifying the risk of local Zika virus transmission in the contiguous US during the 2015-2016 ZIKV epidemic.

Sun K, Zhang Q, Pastore-Piontti A, Chinazzi M, Mistry D, Dean NE, Rojas DP, Merler S, Poletti P, Rossi L, Halloran ME, Longini IM Jr, Vespignani A.

BMC Med. 2018 Oct 18;16(1):195. doi: 10.1186/s12916-018-1185-5.

2.

Optimizing and evaluating biomarker combinations as trial-level general surrogates.

Gabriel EE, Sachs MC, Daniels MJ, Halloran ME.

Stat Med. 2018 Oct 10. doi: 10.1002/sim.7996. [Epub ahead of print]

PMID:
30306600
3.

Intermediate levels of vaccination coverage may minimize seasonal influenza outbreaks.

Zarnitsyna VI, Bulusheva I, Handel A, Longini IM, Halloran ME, Antia R.

PLoS One. 2018 Jun 26;13(6):e0199674. doi: 10.1371/journal.pone.0199674. eCollection 2018.

4.

Forecasting the effectiveness of indoor residual spraying for reducing dengue burden.

Hladish TJ, Pearson CAB, Patricia Rojas D, Gomez-Dantes H, Halloran ME, Vazquez-Prokopec GM, Longini IM.

PLoS Negl Trop Dis. 2018 Jun 25;12(6):e0006570. doi: 10.1371/journal.pntd.0006570. eCollection 2018 Jun.

5.

Transmissibility of Norovirus in Urban Versus Rural Households in a Large Community Outbreak in China.

Tsang TK, Chen TM, Longini IM Jr, Halloran ME, Wu Y, Yang Y.

Epidemiology. 2018 Sep;29(5):675-683. doi: 10.1097/EDE.0000000000000855.

PMID:
29847497
6.

DESIGN OF VACCINE TRIALS DURING OUTBREAKS WITH AND WITHOUT A DELAYED VACCINATION COMPARATOR.

Dean NE, Halloran ME, Longini IM.

Ann Appl Stat. 2018 Mar;12(1):330-347. doi: 10.1214/17-AOAS1095. Epub 2018 Mar 9.

7.

Spatio-temporal coherence of dengue, chikungunya and Zika outbreaks in Merida, Mexico.

Bisanzio D, Dzul-Manzanilla F, Gomez-Dantés H, Pavia-Ruz N, Hladish TJ, Lenhart A, Palacio-Vargas J, González Roldan JF, Correa-Morales F, Sánchez-Tejeda G, Kuri Morales P, Manrique-Saide P, Longini IM, Halloran ME, Vazquez-Prokopec GM.

PLoS Negl Trop Dis. 2018 Mar 15;12(3):e0006298. doi: 10.1371/journal.pntd.0006298. eCollection 2018 Mar.

8.

Efficacy of a bivalent killed whole-cell cholera vaccine over five years: a re-analysis of a cluster-randomized trial.

Fong Y, Halloran ME, Park JK, Marks F, Clemens JD, Chao DL.

BMC Infect Dis. 2018 Feb 20;18(1):84. doi: 10.1186/s12879-018-2981-4.

9.

Seroprevalence of Dengue Antibodies in Three Urban Settings in Yucatan, Mexico.

Pavía-Ruz N, Diana Patricia Rojas, Salha Villanueva, Granja P, Balam-May A, Longini IM, Halloran ME, Manrique-Saide P, Gómez-Dantés H.

Am J Trop Med Hyg. 2018 Apr;98(4):1202-1208. doi: 10.4269/ajtmh.17-0382. Epub 2018 Feb 15.

10.

An Assessment of Household and Individual-Level Mosquito Prevention Methods during the Chikungunya Virus Outbreak in the United States Virgin Islands, 2014-2015.

Feldstein LR, Rowhani-Rahbar A, Staples JE, Halloran ME, Ellis EM.

Am J Trop Med Hyg. 2018 Mar;98(3):845-848. doi: 10.4269/ajtmh.17-0799. Epub 2018 Feb 1.

11.

Simulations for designing and interpreting intervention trials in infectious diseases.

Halloran ME, Auranen K, Baird S, Basta NE, Bellan SE, Brookmeyer R, Cooper BS, DeGruttola V, Hughes JP, Lessler J, Lofgren ET, Longini IM, Onnela JP, Özler B, Seage GR, Smith TA, Vespignani A, Vynnycky E, Lipsitch M.

BMC Med. 2017 Dec 29;15(1):223. doi: 10.1186/s12916-017-0985-3.

12.

Meningococcal carriage within households in the African meningitis belt: A longitudinal pilot study.

Basta NE, Berthe A, Keita M, Onwuchekwa U, Tamboura B, Traore A, Hassan-King M, Manigart O, Nascimento M, Stuart JM, Trotter C, Blake J, Carr AD, Gray SJ, Newbold LS, Deng Y, Wolfson J, Halloran ME, Greenwood B, Borrow R, Sow SO.

J Infect. 2018 Feb;76(2):140-148. doi: 10.1016/j.jinf.2017.11.006. Epub 2017 Nov 29.

13.

Antibody-dependent enhancement of severe dengue disease in humans.

Katzelnick LC, Gresh L, Halloran ME, Mercado JC, Kuan G, Gordon A, Balmaseda A, Harris E.

Science. 2017 Nov 17;358(6365):929-932. doi: 10.1126/science.aan6836. Epub 2017 Nov 2.

14.

Reply to Aguiar and Stollenwerk.

Yang Y, Meng Y, Halloran ME, Longini IM Jr.

Clin Infect Dis. 2018 Feb 1;66(4):642. doi: 10.1093/cid/cix883. No abstract available.

PMID:
29088434
15.

Dependency of Vaccine Efficacy on Preexposure and Age: A Closer Look at a Tetravalent Dengue Vaccine.

Yang Y, Meng Y, Halloran ME, Longini IM Jr.

Clin Infect Dis. 2018 Jan 6;66(2):178-184. doi: 10.1093/cid/cix766.

PMID:
29020332
16.

Evaluation and comparison of predictive individual-level general surrogates.

Gabriel EE, Sachs MC, Halloran ME.

Biostatistics. 2018 Jul 1;19(3):307-324. doi: 10.1093/biostatistics/kxx037.

17.

Estimating population effects of vaccination using large, routinely collected data.

Halloran ME, Hudgens MG.

Stat Med. 2018 Jan 30;37(2):294-301. doi: 10.1002/sim.7392. Epub 2017 Jul 19.

PMID:
28722190
18.

Zika virus evolution and spread in the Americas.

Metsky HC, Matranga CB, Wohl S, Schaffner SF, Freije CA, Winnicki SM, West K, Qu J, Baniecki ML, Gladden-Young A, Lin AE, Tomkins-Tinch CH, Ye SH, Park DJ, Luo CY, Barnes KG, Shah RR, Chak B, Barbosa-Lima G, Delatorre E, Vieira YR, Paul LM, Tan AL, Barcellona CM, Porcelli MC, Vasquez C, Cannons AC, Cone MR, Hogan KN, Kopp EW, Anzinger JJ, Garcia KF, Parham LA, Ramírez RMG, Montoya MCM, Rojas DP, Brown CM, Hennigan S, Sabina B, Scotland S, Gangavarapu K, Grubaugh ND, Oliveira G, Robles-Sikisaka R, Rambaut A, Gehrke L, Smole S, Halloran ME, Villar L, Mattar S, Lorenzana I, Cerbino-Neto J, Valim C, Degrave W, Bozza PT, Gnirke A, Andersen KG, Isern S, Michael SF, Bozza FA, Souza TML, Bosch I, Yozwiak NL, MacInnis BL, Sabeti PC.

Nature. 2017 Jun 15;546(7658):411-415. doi: 10.1038/nature22402. Epub 2017 May 24.

19.

Spread of Zika virus in the Americas.

Zhang Q, Sun K, Chinazzi M, Pastore Y Piontti A, Dean NE, Rojas DP, Merler S, Mistry D, Poletti P, Rossi L, Bray M, Halloran ME, Longini IM Jr, Vespignani A.

Proc Natl Acad Sci U S A. 2017 May 30;114(22):E4334-E4343. doi: 10.1073/pnas.1620161114. Epub 2017 Apr 25.

20.

Effectiveness of a live oral human rotavirus vaccine after programmatic introduction in Bangladesh: A cluster-randomized trial.

Zaman K, Sack DA, Neuzil KM, Yunus M, Moulton LH, Sugimoto JD, Fleming JA, Hossain I, Arifeen SE, Azim T, Rahman M, Lewis KDC, Feller AJ, Qadri F, Halloran ME, Cravioto A, Victor JC.

PLoS Med. 2017 Apr 18;14(4):e1002282. doi: 10.1371/journal.pmed.1002282. eCollection 2017 Apr.

21.

Persistent Arthralgia Associated with Chikungunya Virus Outbreak, US Virgin Islands, December 2014-February 2016.

Feldstein LR, Rowhani-Rahbar A, Staples JE, Weaver MR, Halloran ME, Ellis EM.

Emerg Infect Dis. 2017 Apr;23(4):673-676. doi: 10.3201/eid2304.161562.

22.

Dependent Happenings: A Recent Methodological Review.

Halloran ME, Hudgens MG.

Curr Epidemiol Rep. 2016 Dec;3(4):297-305. doi: 10.1007/s40471-016-0086-4. Epub 2016 Jul 28.

23.

Rotavirus vaccine effectiveness in low-income settings: An evaluation of the test-negative design.

Schwartz LM, Halloran ME, Rowhani-Rahbar A, Neuzil KM, Victor JC.

Vaccine. 2017 Jan 3;35(1):184-190. doi: 10.1016/j.vaccine.2016.10.077. Epub 2016 Nov 18.

24.

Containing Ebola at the Source with Ring Vaccination.

Merler S, Ajelli M, Fumanelli L, Parlamento S, Pastore Y Piontti A, Dean NE, Putoto G, Carraro D, Longini IM Jr, Halloran ME, Vespignani A.

PLoS Negl Trop Dis. 2016 Nov 2;10(11):e0005093. doi: 10.1371/journal.pntd.0005093. eCollection 2016 Nov.

25.

PREDICTIVE MODELING OF CHOLERA OUTBREAKS IN BANGLADESH.

Koepke AA, Longini IM Jr, Halloran ME, Wakefield J, Minin VN.

Ann Appl Stat. 2016 Jun;10(2):575-595. Epub 2016 Jul 22.

26.

Spatiotemporal dynamics of the Ebola epidemic in Guinea and implications for vaccination and disease elimination: a computational modeling analysis.

Ajelli M, Merler S, Fumanelli L, Pastore Y Piontti A, Dean NE, Longini IM Jr, Halloran ME, Vespignani A.

BMC Med. 2016 Sep 7;14(1):130. doi: 10.1186/s12916-016-0678-3.

27.

The epidemiology and transmissibility of Zika virus in Girardot and San Andres island, Colombia, September 2015 to January 2016.

Rojas DP, Dean NE, Yang Y, Kenah E, Quintero J, Tomasi S, Ramirez EL, Kelly Y, Castro C, Carrasquilla G, Halloran ME, Longini IM.

Euro Surveill. 2016 Jul 14;21(28). doi: 10.2807/1560-7917.ES.2016.21.28.30283.

28.

The First Reported Outbreak of Chikungunya in the U.S. Virgin Islands, 2014-2015.

Feldstein LR, Ellis EM, Rowhani-Rahbar A, Halloran ME, Ellis BR.

Am J Trop Med Hyg. 2016 Oct 5;95(4):885-889. Epub 2016 Jul 11.

29.

Projected Impact of Dengue Vaccination in Yucatán, Mexico.

Hladish TJ, Pearson CA, Chao DL, Rojas DP, Recchia GL, Gómez-Dantés H, Halloran ME, Pulliam JR, Longini IM.

PLoS Negl Trop Dis. 2016 May 26;10(5):e0004661. doi: 10.1371/journal.pntd.0004661. eCollection 2016 May.

30.

Molecular Infectious Disease Epidemiology: Survival Analysis and Algorithms Linking Phylogenies to Transmission Trees.

Kenah E, Britton T, Halloran ME, Longini IM Jr.

PLoS Comput Biol. 2016 Apr 12;12(4):e1004869. doi: 10.1371/journal.pcbi.1004869. eCollection 2016 Apr.

31.

Comparing biomarkers as trial level general surrogates.

Gabriel EE, Daniels MJ, Halloran ME.

Biometrics. 2016 Dec;72(4):1046-1054. doi: 10.1111/biom.12513. Epub 2016 Apr 1.

32.

Transmission dynamics of Ebola virus disease and intervention effectiveness in Sierra Leone.

Fang LQ, Yang Y, Jiang JF, Yao HW, Kargbo D, Li XL, Jiang BG, Kargbo B, Tong YG, Wang YW, Liu K, Kamara A, Dafae F, Kanu A, Jiang RR, Sun Y, Sun RX, Chen WJ, Ma MJ, Dean NE, Thomas H, Longini IM Jr, Halloran ME, Cao WC.

Proc Natl Acad Sci U S A. 2016 Apr 19;113(16):4488-93. doi: 10.1073/pnas.1518587113. Epub 2016 Mar 28.

33.

Transmissibility and Pathogenicity of Ebola Virus: A Systematic Review and Meta-analysis of Household Secondary Attack Rate and Asymptomatic Infection.

Dean NE, Halloran ME, Yang Y, Longini IM.

Clin Infect Dis. 2016 May 15;62(10):1277-1286. doi: 10.1093/cid/ciw114. Epub 2016 Feb 29. Review.

34.

One versus two doses: What is the best use of vaccine in an influenza pandemic?

Matrajt L, Britton T, Halloran ME, Longini IM Jr.

Epidemics. 2015 Dec;13:17-27. doi: 10.1016/j.epidem.2015.06.001. Epub 2015 Jun 22.

35.

A Bayesian approach to estimating causal vaccine effects on binary post-infection outcomes.

Zhou J, Chu H, Hudgens MG, Halloran ME.

Stat Med. 2016 Jan 15;35(1):53-64. doi: 10.1002/sim.6573. Epub 2015 Jul 20.

36.

The dengue vaccine pipeline: Implications for the future of dengue control.

Schwartz LM, Halloran ME, Durbin AP, Longini IM Jr.

Vaccine. 2015 Jun 26;33(29):3293-8. doi: 10.1016/j.vaccine.2015.05.010. Epub 2015 May 16. Review.

37.

The contribution of neighbours to an individual's risk of typhoid outcome.

Chao DL, Park JK, Marks F, Ochiai RL, Longini IM, Halloran ME.

Epidemiol Infect. 2015 Dec;143(16):3520-7. doi: 10.1017/S0950268815000692. Epub 2015 May 4.

38.

The case for a typhoid vaccine probe study and overview of design elements.

Gessner BD, Halloran ME, Khan I.

Vaccine. 2015 Jun 19;33 Suppl 3:C30-5. doi: 10.1016/j.vaccine.2015.03.085. Epub 2015 Apr 23. Review.

39.

Seven challenges for model-driven data collection in experimental and observational studies.

Lessler J, Edmunds WJ, Halloran ME, Hollingsworth TD, Lloyd AL.

Epidemics. 2015 Mar;10:78-82. doi: 10.1016/j.epidem.2014.12.002. Epub 2014 Dec 16.

40.

Vaccine testing. Ebola and beyond.

Lipsitch M, Eyal N, Halloran ME, Hernán MA, Longini IM, Perencevich EN, Grais RF.

Science. 2015 Apr 3;348(6230):46-8. doi: 10.1126/science.aaa3178. No abstract available.

41.

Household transmissibility of avian influenza A (H7N9) virus, China, February to May 2013 and October 2013 to March 2014.

Yang Y, Zhang Y, Fang L, Halloran ME, Ma M, Liang S, Kenah E, Britton T, Chen E, Hu J, Tang F, Cao W, Feng Z, Longini IM Jr.

Euro Surveill. 2015 Mar 12;20(10):21056.

42.

Assessing the international spreading risk associated with the 2014 west african ebola outbreak.

Gomes MF, Pastore Y Piontti A, Rossi L, Chao D, Longini I, Halloran ME, Vespignani A.

PLoS Curr. 2014 Sep 2;6. pii: ecurrents.outbreaks.cd818f63d40e24aef769dda7df9e0da5. doi: 10.1371/currents.outbreaks.cd818f63d40e24aef769dda7df9e0da5.

43.

Interference and Sensitivity Analysis.

VanderWeele TJ, Tchetgen Tchetgen EJ, Halloran ME.

Stat Sci. 2014 Nov;29(4):687-706.

44.

Spatiotemporal spread of the 2014 outbreak of Ebola virus disease in Liberia and the effectiveness of non-pharmaceutical interventions: a computational modelling analysis.

Merler S, Ajelli M, Fumanelli L, Gomes MF, Piontti AP, Rossi L, Chao DL, Longini IM Jr, Halloran ME, Vespignani A.

Lancet Infect Dis. 2015 Feb;15(2):204-11. doi: 10.1016/S1473-3099(14)71074-6. Epub 2015 Jan 7.

45.

Opinion: Mathematical models: a key tool for outbreak response.

Lofgren ET, Halloran ME, Rivers CM, Drake JM, Porco TC, Lewis B, Yang W, Vespignani A, Shaman J, Eisenberg JN, Eisenberg MC, Marathe M, Scarpino SV, Alexander KA, Meza R, Ferrari MJ, Hyman JM, Meyers LA, Eubank S.

Proc Natl Acad Sci U S A. 2014 Dec 23;111(51):18095-6. doi: 10.1073/pnas.1421551111. Epub 2014 Dec 10. No abstract available.

46.

School-located influenza vaccination reduces community risk for influenza and influenza-like illness emergency care visits.

Tran CH, Sugimoto JD, Pulliam JR, Ryan KA, Myers PD, Castleman JB, Doty R, Johnson J, Stringfellow J, Kovacevich N, Brew J, Cheung LL, Caron B, Lipori G, Harle CA, Alexander C, Yang Y, Longini IM Jr, Halloran ME, Morris JG Jr, Small PA Jr.

PLoS One. 2014 Dec 9;9(12):e114479. doi: 10.1371/journal.pone.0114479. eCollection 2014.

47.

Comparative effectiveness of different strategies of oral cholera vaccination in bangladesh: a modeling study.

Dimitrov DT, Troeger C, Halloran ME, Longini IM, Chao DL.

PLoS Negl Trop Dis. 2014 Dec 4;8(12):e3343. doi: 10.1371/journal.pntd.0003343. eCollection 2014 Dec.

48.

Household Transmission of Vibrio cholerae in Bangladesh.

Sugimoto JD, Koepke AA, Kenah EE, Halloran ME, Chowdhury F, Khan AI, LaRocque RC, Yang Y, Ryan ET, Qadri F, Calderwood SB, Harris JB, Longini IM Jr.

PLoS Negl Trop Dis. 2014 Nov 20;8(11):e3314. doi: 10.1371/journal.pntd.0003314. eCollection 2014 Nov.

49.

Assessing the impact of travel restrictions on international spread of the 2014 West African Ebola epidemic.

Poletto C, Gomes MF, Pastore y Piontti A, Rossi L, Bioglio L, Chao DL, Longini IM, Halloran ME, Colizza V, Vespignani A.

Euro Surveill. 2014 Oct 23;19(42). pii: 20936.

50.

Ebola: mobility data.

Halloran ME, Vespignani A, Bharti N, Feldstein LR, Alexander KA, Ferrari M, Shaman J, Drake JM, Porco T, Eisenberg JN, Del Valle SY, Lofgren E, Scarpino SV, Eisenberg MC, Gao D, Hyman JM, Eubank S, Longini IM Jr.

Science. 2014 Oct 24;346(6208):433. doi: 10.1126/science.346.6208.433-a. No abstract available.

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