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Items: 45

1.

Identification of trehalose as a compatible solute in different species of acidophilic bacteria.

Galleguillos PA, Grail BM, Hallberg KB, Demergasso CS, Johnson DB.

J Microbiol. 2018 Oct;56(10):727-733. doi: 10.1007/s12275-018-8176-2. Epub 2018 Sep 28.

PMID:
30267316
2.

Uncovering a microbial enigma: isolation and characterization of the streamer-generating, iron-oxidizing, acidophilic bacterium "Ferrovum myxofaciens".

Johnson DB, Hallberg KB, Hedrich S.

Appl Environ Microbiol. 2014 Jan;80(2):672-80. doi: 10.1128/AEM.03230-13. Epub 2013 Nov 15.

3.

Evolution of microbial "streamer" growths in an acidic, metal-contaminated stream draining an abandoned underground copper mine.

Kay CM, Rowe OF, Rocchetti L, Coupland K, Hallberg KB, Johnson DB.

Life (Basel). 2013 Feb 7;3(1):189-210. doi: 10.3390/life3010189.

4.

Effects of prokaryotic diversity changes on hydrocarbon degradation rates and metal partitioning during bioremediation of contaminated anoxic marine sediments.

Rocchetti L, Beolchini F, Hallberg KB, Johnson DB, Dell'Anno A.

Mar Pollut Bull. 2012 Aug;64(8):1688-98. doi: 10.1016/j.marpolbul.2012.05.038. Epub 2012 Jun 28.

PMID:
22748839
5.

Spatial and temporal analysis of the microbial community in the tailings of a Pb-Zn mine generating acidic drainage.

Huang LN, Zhou WH, Hallberg KB, Wan CY, Li J, Shu WS.

Appl Environ Microbiol. 2011 Aug;77(15):5540-4. doi: 10.1128/AEM.02458-10. Epub 2011 Jun 24.

6.

Biodiversity and geochemistry of an extremely acidic, low-temperature subterranean environment sustained by chemolithotrophy.

Kimura S, Bryan CG, Hallberg KB, Johnson DB.

Environ Microbiol. 2011 Aug;13(8):2092-104. doi: 10.1111/j.1462-2920.2011.02434.x. Epub 2011 Mar 7.

PMID:
21382147
7.

Acidiferrobacter thiooxydans, gen. nov. sp. nov.; an acidophilic, thermo-tolerant, facultatively anaerobic iron- and sulfur-oxidizer of the family Ectothiorhodospiraceae.

Hallberg KB, Hedrich S, Johnson DB.

Extremophiles. 2011 Mar;15(2):271-9. doi: 10.1007/s00792-011-0359-2. Epub 2011 Feb 11.

PMID:
21311931
8.

Proposal that the arsenite-oxidizing organisms Thiomonas cuprina and 'Thiomonas arsenivorans' be reclassified as strains of Thiomonas delicata, and emended description of Thiomonas delicata.

Battaglia-Brunet F, El Achbouni H, Quemeneur M, Hallberg KB, Kelly DP, Joulian C.

Int J Syst Evol Microbiol. 2011 Dec;61(Pt 12):2816-21. doi: 10.1099/ijs.0.023408-0. Epub 2011 Jan 7.

PMID:
21216915
9.

Ecophysiology of Fe-cycling bacteria in acidic sediments.

Lu S, Gischkat S, Reiche M, Akob DM, Hallberg KB, Küsel K.

Appl Environ Microbiol. 2010 Dec;76(24):8174-83. doi: 10.1128/AEM.01931-10. Epub 2010 Oct 22.

10.

Phylogenetic and genetic variation among Fe(II)-oxidizing acidithiobacilli supports the view that these comprise multiple species with different ferrous iron oxidation pathways.

Amouric A, Brochier-Armanet C, Johnson DB, Bonnefoy V, Hallberg KB.

Microbiology. 2011 Jan;157(Pt 1):111-22. doi: 10.1099/mic.0.044537-0. Epub 2010 Sep 30.

PMID:
20884692
11.

Acidithiobacillus ferrivorans, sp. nov.; facultatively anaerobic, psychrotolerant iron-, and sulfur-oxidizing acidophiles isolated from metal mine-impacted environments.

Hallberg KB, González-Toril E, Johnson DB.

Extremophiles. 2010 Jan;14(1):9-19. doi: 10.1007/s00792-009-0282-y. Epub 2009 Sep 29.

PMID:
19787416
12.

Ferrimicrobium acidiphilum gen. nov., sp. nov. and Ferrithrix thermotolerans gen. nov., sp. nov.: heterotrophic, iron-oxidizing, extremely acidophilic actinobacteria.

Johnson DB, Bacelar-Nicolau P, Okibe N, Thomas A, Hallberg KB.

Int J Syst Evol Microbiol. 2009 May;59(Pt 5):1082-9. doi: 10.1099/ijs.0.65409-0.

PMID:
19406797
13.

Carbon, iron and sulfur metabolism in acidophilic micro-organisms.

Barrie Johnson D, Hallberg KB.

Adv Microb Physiol. 2009;54:201-55. doi: 10.1016/S0065-2911(08)00003-9. Review.

PMID:
18929069
14.

Sulfobacillus benefaciens sp. nov., an acidophilic facultative anaerobic Firmicute isolated from mineral bioleaching operations.

Johnson DB, Joulian C, d'Hugues P, Hallberg KB.

Extremophiles. 2008 Nov;12(6):789-98. doi: 10.1007/s00792-008-0184-4. Epub 2008 Aug 22.

PMID:
18719854
15.

Culturable and molecular phylogenetic diversity of microorganisms in an open-dumped, extremely acidic Pb/Zn mine tailings.

Tan GL, Shu WS, Hallberg KB, Li F, Lan CY, Zhou WH, Huang LN.

Extremophiles. 2008 Sep;12(5):657-64. doi: 10.1007/s00792-008-0171-9. Epub 2008 May 30.

PMID:
18512002
16.

Iron and carbon metabolism by a mineral-oxidizing Alicyclobacillus-like bacterium.

Yahya A, Hallberg KB, Johnson DB.

Arch Microbiol. 2008 Apr;189(4):305-12. Epub 2007 Nov 15.

PMID:
18004545
18.

Microbial communities in a porphyry copper tailings impoundment and their impact on the geochemical dynamics of the mine waste.

Diaby N, Dold B, Pfeifer HR, Holliger C, Johnson DB, Hallberg KB.

Environ Microbiol. 2007 Feb;9(2):298-307.

PMID:
17222129
19.
20.

Proteomic and bioinformatic analysis of iron- and sulfur-oxidizing Acidithiobacillus ferrooxidans using immobilized pH gradients and mass spectrometry.

Bouchal P, Zdráhal Z, Helánová S, Janiczek O, Hallberg KB, Mandl M.

Proteomics. 2006 Aug;6(15):4278-85.

PMID:
16807941
21.
22.

Sulfidogenesis in low pH (3.8-4.2) media by a mixed population of acidophilic bacteria.

Kimura S, Hallberg KB, Johnson DB.

Biodegradation. 2006 Mar;17(2):159-67. Epub 2006 Feb 2.

PMID:
16456614
23.
24.

Oxidation of arsenite by Thiomonas strains and characterization of Thiomonas arsenivorans sp. nov.

Battaglia-Brunet F, Joulian C, Garrido F, Dictor MC, Morin D, Coupland K, Barrie Johnson D, Hallberg KB, Baranger P.

Antonie Van Leeuwenhoek. 2006 Jan;89(1):99-108. Epub 2005 Dec 8.

PMID:
16341463
25.

Biological manganese removal from acid mine drainage in constructed wetlands and prototype bioreactors.

Hallberg KB, Johnson DB.

Sci Total Environ. 2005 Feb 1;338(1-2):115-24.

PMID:
15680632
26.
27.

Microbiology of a wetland ecosystem constructed to remediate mine drainage from a heavy metal mine.

Hallberg KB, Johnson DB.

Sci Total Environ. 2005 Feb 1;338(1-2):53-66.

PMID:
15680626
28.

Acid mine drainage remediation options: a review.

Johnson DB, Hallberg KB.

Sci Total Environ. 2005 Feb 1;338(1-2):3-14. Review.

PMID:
15680622
29.

Differentiation and identification of iron-oxidizing acidophilic bacteria using cultivation techniques and amplified ribosomal DNA restriction enzyme analysis.

Johnson DB, Okibe N, Hallberg KB.

J Microbiol Methods. 2005 Mar;60(3):299-313. Erratum in: J Microbiol Methods. 2005 Nov;63(2):216-7.

PMID:
15649532
30.

The microbiology of acidic mine waters.

Johnson DB, Hallberg KB.

Res Microbiol. 2003 Sep;154(7):466-73. Review.

PMID:
14499932
31.

Enumeration and characterization of acidophilic microorganisms isolated from a pilot plant stirred-tank bioleaching operation.

Okibe N, Gericke M, Hallberg KB, Johnson DB.

Appl Environ Microbiol. 2003 Apr;69(4):1936-43.

32.

Ralstonia basilensis M91-3, a denitrifying soil bacterium capable of using s-triazines as nitrogen sources.

Stamper DM, Radosevich M, Hallberg KB, Traina SJ, Tuovinen OH.

Can J Microbiol. 2002 Dec;48(12):1089-98.

PMID:
12619822
34.

Biodiversity of acidophilic prokaryotes.

Hallberg KB, Johnson DB.

Adv Appl Microbiol. 2001;49:37-84. Review. No abstract available.

PMID:
11757351
35.
36.

Chromosomally encoded arsenical resistance of the moderately thermophilic acidophile Acidithiobacillus caldus.

Dopson M, Lindström EB, Hallberg KB.

Extremophiles. 2001 Aug;5(4):247-55.

PMID:
11523894
37.

A fast and simple turbidimetric method for the determination of sulfate in sulfate-reducing bacterial cultures.

Kolmert A, Wikström P, Hallberg KB.

J Microbiol Methods. 2000 Aug;41(3):179-84.

PMID:
10958962
38.
39.

Reduced sulfur compound oxidation by Thiobacillus caldus.

Hallberg KB, Dopson M, Lindström EB.

J Bacteriol. 1996 Jan;178(1):6-11.

40.

Characterization of Thiobacillus caldus sp. nov., a moderately thermophilic acidophile.

Hallberg KB, Lindström EB.

Microbiology. 1994 Dec;140 ( Pt 12):3451-6.

PMID:
7533596
41.

An immunological assay for detection and enumeration of thermophilic biomining microorganisms.

Amaro AM, Hallberg KB, Lindström EB, Jerez CA.

Appl Environ Microbiol. 1994 Sep;60(9):3470-3.

42.

Oxidative dissolution of arsenopyrite by mesophilic and moderately thermophilic acidophiles.

Tuovinen OH, Bhatti TM, Bigham JM, Hallberg KB, Garcia O, Lindström EB.

Appl Environ Microbiol. 1994 Sep;60(9):3268-74.

43.

Solid-phase products of bacterial oxidation of arsenical pyrite.

Carlson L, Lindström EB, Hallberg KB, Tuovinen OH.

Appl Environ Microbiol. 1992 Mar;58(3):1046-9.

44.

Chemical inactivation of microorganisms on rigid gas permeable contact lenses.

McLaughlin WR, Hallberg KB, Tuovinen OH.

Optom Vis Sci. 1991 Sep;68(9):721-7.

PMID:
1745499
45.

Biological degradation of 2,4-dichlorophenoxyacetic acid: chloride mass balance in stirred tank reactors.

Kelly MP, Hallberg KB, Tuovinen OH.

Appl Environ Microbiol. 1989 Oct;55(10):2717-9.

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