Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 54

1.

Genetic drift in range expansions is very sensitive to density dependence in dispersal and growth.

Birzu G, Matin S, Hallatschek O, Korolev KS.

Ecol Lett. 2019 Nov;22(11):1817-1827. doi: 10.1111/ele.13364. Epub 2019 Sep 8.

PMID:
31496047
2.

Biomechanical Feedback Strengthens Jammed Cellular Packings.

Gniewek P, Schreck CF, Hallatschek O.

Phys Rev Lett. 2019 May 24;122(20):208102. doi: 10.1103/PhysRevLett.122.208102.

PMID:
31172757
3.

Environmental heterogeneity can tip the population genetics of range expansions.

Gralka M, Hallatschek O.

Elife. 2019 Apr 12;8. pii: e44359. doi: 10.7554/eLife.44359.

4.

Fluid flow through packings of elastic shells.

Gniewek P, Hallatschek O.

Phys Rev E. 2019 Feb;99(2-1):023103. doi: 10.1103/PhysRevE.99.023103.

PMID:
30934257
5.

Spatial soft sweeps: Patterns of adaptation in populations with long-range dispersal.

Paulose J, Hermisson J, Hallatschek O.

PLoS Genet. 2019 Feb 11;15(2):e1007936. doi: 10.1371/journal.pgen.1007936. eCollection 2019 Feb.

6.

Evolutionary dynamics of bacteria in the gut microbiome within and across hosts.

Garud NR, Good BH, Hallatschek O, Pollard KS.

PLoS Biol. 2019 Jan 23;17(1):e3000102. doi: 10.1371/journal.pbio.3000102. eCollection 2019 Jan.

7.

Effective models and the search for quantitative principles in microbial evolution.

Good BH, Hallatschek O.

Curr Opin Microbiol. 2018 Oct;45:203-212. doi: 10.1016/j.mib.2018.11.005. Epub 2018 Dec 6. Review.

PMID:
30530175
8.

Collective motion conceals fitness differences in crowded cellular populations.

Kayser J, Schreck CF, Gralka M, Fusco D, Hallatschek O.

Nat Ecol Evol. 2018 Dec 3;3(1):125-134. doi: 10.1038/s41559-018-0734-9.

9.

Adaptation limits ecological diversification and promotes ecological tinkering during the competition for substitutable resources.

Good BH, Martis S, Hallatschek O.

Proc Natl Acad Sci U S A. 2018 Oct 30;115(44):E10407-E10416. doi: 10.1073/pnas.1807530115. Epub 2018 Oct 15.

10.

Selection-Like Biases Emerge in Population Models with Recurrent Jackpot Events.

Hallatschek O.

Genetics. 2018 Nov;210(3):1053-1073. doi: 10.1534/genetics.118.301516. Epub 2018 Aug 31.

PMID:
30171032
11.

Mechano-chemostats to study the effects of compressive stress on yeast.

Holt LJ, Hallatschek O, Delarue M.

Methods Cell Biol. 2018;147:215-231. doi: 10.1016/bs.mcb.2018.06.010. Epub 2018 Jul 19.

PMID:
30165959
12.

Emergence of evolutionary driving forces in pattern-forming microbial populations.

Kayser J, Schreck CF, Yu Q, Gralka M, Hallatschek O.

Philos Trans R Soc Lond B Biol Sci. 2018 May 26;373(1747). pii: 20170106. doi: 10.1098/rstb.2017.0106. Review.

13.

Fluctuations uncover a distinct class of traveling waves.

Birzu G, Hallatschek O, Korolev KS.

Proc Natl Acad Sci U S A. 2018 Apr 17;115(16):E3645-E3654. doi: 10.1073/pnas.1715737115. Epub 2018 Apr 2.

14.

SCWISh network is essential for survival under mechanical pressure.

Delarue M, Poterewicz G, Hoxha O, Choi J, Yoo W, Kayser J, Holt L, Hallatschek O.

Proc Natl Acad Sci U S A. 2017 Dec 19;114(51):13465-13470. doi: 10.1073/pnas.1711204114. Epub 2017 Nov 29.

15.

A simple molecular mechanism explains multiple patterns of cell-size regulation.

Delarue M, Weissman D, Hallatschek O.

PLoS One. 2017 Aug 16;12(8):e0182633. doi: 10.1371/journal.pone.0182633. eCollection 2017.

16.

Minimal-assumption inference from population-genomic data.

Weissman DB, Hallatschek O.

Elife. 2017 Jul 3;6. pii: e24836. doi: 10.7554/eLife.24836.

17.

Convection shapes the trade-off between antibiotic efficacy and the selection for resistance in spatial gradients.

Gralka M, Fusco D, Martis S, Hallatschek O.

Phys Biol. 2017 Jul 19;14(4):045011. doi: 10.1088/1478-3975/aa7bb3.

18.

Mechanical interactions in bacterial colonies and the surfing probability of beneficial mutations.

Farrell FD, Gralka M, Hallatschek O, Waclaw B.

J R Soc Interface. 2017 Jun;14(131). pii: 20170073. doi: 10.1098/rsif.2017.0073.

19.

Excess of mutational jackpot events in expanding populations revealed by spatial Luria-Delbrück experiments.

Fusco D, Gralka M, Kayser J, Anderson A, Hallatschek O.

Nat Commun. 2016 Oct 3;7:12760. doi: 10.1038/ncomms12760.

20.

Self-Driven Jamming in Growing Microbial Populations.

Delarue M, Hartung J, Schreck C, Gniewek P, Hu L, Herminghaus S, Hallatschek O.

Nat Phys. 2016 Aug;12(8):762-766. Epub 2016 May 9.

21.

Thermalized connectivity networks of jammed packings.

Buss C, Heussinger C, Hallatschek O.

Soft Matter. 2016 Sep 28;12(36):7682-7. doi: 10.1039/c6sm00864j. Epub 2016 Aug 5.

PMID:
27491337
22.

Watching Populations Melt Down.

Gralka M, Fusco D, Hallatschek O.

Biophys J. 2016 Jul 26;111(2):271-272. doi: 10.1016/j.bpj.2016.06.020. No abstract available.

23.

Allele surfing promotes microbial adaptation from standing variation.

Gralka M, Stiewe F, Farrell F, Möbius W, Waclaw B, Hallatschek O.

Ecol Lett. 2016 Aug;19(8):889-98. doi: 10.1111/ele.12625. Epub 2016 Jun 16.

24.

Collective Fluctuations in the Dynamics of Adaptation and Other Traveling Waves.

Hallatschek O, Geyrhofer L.

Genetics. 2016 Mar;202(3):1201-27. doi: 10.1534/genetics.115.181271. Epub 2016 Jan 27.

25.

Computing Nonequilibrium Conformational Dynamics of Structured Nucleic Acid Assemblies.

Sedeh RS, Pan K, Adendorff MR, Hallatschek O, Bathe KJ, Bathe M.

J Chem Theory Comput. 2016 Jan 12;12(1):261-73. doi: 10.1021/acs.jctc.5b00965. Epub 2015 Dec 16.

PMID:
26636351
26.

Acceleration of evolutionary spread by long-range dispersal.

Hallatschek O, Fisher DS.

Proc Natl Acad Sci U S A. 2014 Nov 18;111(46):E4911-9. doi: 10.1073/pnas.1404663111. Epub 2014 Nov 3.

27.

The rate of adaptation in large sexual populations with linear chromosomes.

Weissman DB, Hallatschek O.

Genetics. 2014 Apr;196(4):1167-83. doi: 10.1534/genetics.113.160705. Epub 2014 Jan 15.

28.

Mechanically driven growth of quasi-two-dimensional microbial colonies.

Farrell FD, Hallatschek O, Marenduzzo D, Waclaw B.

Phys Rev Lett. 2013 Oct 18;111(16):168101. Epub 2013 Oct 14.

PMID:
24182305
29.

Genomic evidence for ameiotic evolution in the bdelloid rotifer Adineta vaga.

Flot JF, Hespeels B, Li X, Noel B, Arkhipova I, Danchin EG, Hejnol A, Henrissat B, Koszul R, Aury JM, Barbe V, Barthélémy RM, Bast J, Bazykin GA, Chabrol O, Couloux A, Da Rocha M, Da Silva C, Gladyshev E, Gouret P, Hallatschek O, Hecox-Lea B, Labadie K, Lejeune B, Piskurek O, Poulain J, Rodriguez F, Ryan JF, Vakhrusheva OA, Wajnberg E, Wirth B, Yushenova I, Kellis M, Kondrashov AS, Mark Welch DB, Pontarotti P, Weissenbach J, Wincker P, Jaillon O, Van Doninck K.

Nature. 2013 Aug 22;500(7463):453-7. doi: 10.1038/nature12326. Epub 2013 Jul 21.

30.

Chimera states in mechanical oscillator networks.

Martens EA, Thutupalli S, Fourrière A, Hallatschek O.

Proc Natl Acad Sci U S A. 2013 Jun 25;110(26):10563-7. doi: 10.1073/pnas.1302880110. Epub 2013 Jun 12.

31.

The coalescent in boundary-limited range expansions.

Nullmeier J, Hallatschek O.

Evolution. 2013 May;67(5):1307-20. doi: 10.1111/evo.12037. Epub 2013 Jan 17.

PMID:
23617910
32.

Genealogies of rapidly adapting populations.

Neher RA, Hallatschek O.

Proc Natl Acad Sci U S A. 2013 Jan 8;110(2):437-42. doi: 10.1073/pnas.1213113110. Epub 2012 Dec 26.

33.

Spatial structure increases the waiting time for cancer.

Martens EA, Kostadinov R, Maley CC, Hallatschek O.

New J Phys. 2011 Nov 1;13. pii: 115014. Epub 2011 Nov 28.

34.

The rate of beneficial mutations surfing on the wave of a range expansion.

Lehe R, Hallatschek O, Peliti L.

PLoS Comput Biol. 2012;8(3):e1002447. doi: 10.1371/journal.pcbi.1002447. Epub 2012 Mar 29.

35.

Selective sweeps in growing microbial colonies.

Korolev KS, Müller MJ, Karahan N, Murray AW, Hallatschek O, Nelson DR.

Phys Biol. 2012;9(2):026008. doi: 10.1088/1478-3975/9/2/026008. Epub 2012 Apr 4.

36.

Distribution of fixed beneficial mutations and the rate of adaptation in asexual populations.

Good BH, Rouzine IM, Balick DJ, Hallatschek O, Desai MM.

Proc Natl Acad Sci U S A. 2012 Mar 27;109(13):4950-5. doi: 10.1073/pnas.1119910109. Epub 2012 Feb 27.

37.

Interfering waves of adaptation promote spatial mixing.

Martens EA, Hallatschek O.

Genetics. 2011 Nov;189(3):1045-60. doi: 10.1534/genetics.111.130112. Epub 2011 Sep 6.

38.

Noise driven evolutionary waves.

Hallatschek O.

PLoS Comput Biol. 2011 Mar;7(3):e1002005. doi: 10.1371/journal.pcbi.1002005. Epub 2011 Mar 10.

39.

The noisy edge of traveling waves.

Hallatschek O.

Proc Natl Acad Sci U S A. 2011 Feb 1;108(5):1783-7. doi: 10.1073/pnas.1013529108. Epub 2010 Dec 27.

40.

Genetic demixing and evolution in linear stepping stone models.

Korolev KS, Avlund M, Hallatschek O, Nelson DR.

Rev Mod Phys. 2010 Jun 1;82(2):1691-1718.

41.

Fisher waves in the strong noise limit.

Hallatschek O, Korolev KS.

Phys Rev Lett. 2009 Sep 4;103(10):108103. Epub 2009 Sep 2.

PMID:
19792344
42.

Life at the front of an expanding population.

Hallatschek O, Nelson DR.

Evolution. 2010 Jan;64(1):193-206. doi: 10.1111/j.1558-5646.2009.00809.x. Epub 2009 Aug 14.

PMID:
19682067
43.

Freely relaxing polymers remember how they were straightened.

Obermayer B, Möbius W, Hallatschek O, Frey E, Kroy K.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Feb;79(2 Pt 1):021804. Epub 2009 Feb 26.

PMID:
19391769
44.

Dynamic structure factor of a stiff polymer in a glassy solution.

Glaser J, Hallatschek O, Kroy K.

Eur Phys J E Soft Matter. 2008 May-Jun;26(1-2):123-36. doi: 10.1140/epje/i2007-10321-2. Epub 2008 May 20.

PMID:
18491032
45.

Genetic drift at expanding frontiers promotes gene segregation.

Hallatschek O, Hersen P, Ramanathan S, Nelson DR.

Proc Natl Acad Sci U S A. 2007 Dec 11;104(50):19926-30. Epub 2007 Dec 4.

46.

Gene surfing in expanding populations.

Hallatschek O, Nelson DR.

Theor Popul Biol. 2008 Feb;73(1):158-70. Epub 2007 Sep 19.

PMID:
17963807
47.

Coupling of transverse and longitudinal response in stiff polymers.

Obermayer B, Hallatschek O.

Phys Rev Lett. 2007 Aug 31;99(9):098302. Epub 2007 Aug 31.

PMID:
17931042
48.

Stretching dynamics of semiflexible polymers.

Obermayer B, Hallatschek O, Frey E, Kroy K.

Eur Phys J E Soft Matter. 2007 Aug;23(4):375-88. Epub 2007 Aug 29.

PMID:
17728980
49.

Tension dynamics in semiflexible polymers. II. Scaling solutions and applications.

Hallatschek O, Frey E, Kroy K.

Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Mar;75(3 Pt 1):031906. Epub 2007 Mar 7.

PMID:
17500725
50.

Tension dynamics in semiflexible polymers. I. Coarse-grained equations of motion.

Hallatschek O, Frey E, Kroy K.

Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Mar;75(3 Pt 1):031905. Epub 2007 Mar 7.

PMID:
17500724

Supplemental Content

Loading ...
Support Center