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Items: 20

1.

Evolutionary and functional analysis of RBMY1 gene copy number variation on the human Y chromosome.

Shi W, Louzada S, Grigorova M, Massaia A, Arciero E, Kibena L, Ge XJ, Chen Y, Ayub Q, Poolamets O, Tyler-Smith C, Punab M, Laan M, Yang F, Hallast P, Xue Y.

Hum Mol Genet. 2019 Aug 15;28(16):2785-2798. doi: 10.1093/hmg/ddz101.

2.

Copy number variation arising from gene conversion on the human Y chromosome.

Shi W, Massaia A, Louzada S, Banerjee R, Hallast P, Chen Y, Bergström A, Gu Y, Leonard S, Quail MA, Ayub Q, Yang F, Tyler-Smith C, Xue Y.

Hum Genet. 2018 Jan;137(1):73-83. doi: 10.1007/s00439-017-1857-9. Epub 2017 Dec 5.

3.

Population resequencing of European mitochondrial genomes highlights sex-bias in Bronze Age demographic expansions.

Batini C, Hallast P, Vågene ÅJ, Zadik D, Eriksen HA, Pamjav H, Sajantila A, Wetton JH, Jobling MA.

Sci Rep. 2017 Sep 21;7(1):12086. doi: 10.1038/s41598-017-11307-9.

4.

The Y chromosomes of the great apes.

Hallast P, Jobling MA.

Hum Genet. 2017 May;136(5):511-528. doi: 10.1007/s00439-017-1769-8. Epub 2017 Mar 6. Review.

PMID:
28265767
5.

Signatures of human European Palaeolithic expansion shown by resequencing of non-recombining X-chromosome segments.

Maisano Delser P, Neumann R, Ballereau S, Hallast P, Batini C, Zadik D, Jobling MA.

Eur J Hum Genet. 2017 Apr;25(4):485-492. doi: 10.1038/ejhg.2016.207. Epub 2017 Jan 25.

6.

Chad Genetic Diversity Reveals an African History Marked by Multiple Holocene Eurasian Migrations.

Haber M, Mezzavilla M, Bergström A, Prado-Martinez J, Hallast P, Saif-Ali R, Al-Habori M, Dedoussis G, Zeggini E, Blue-Smith J, Wells RS, Xue Y, Zalloua PA, Tyler-Smith C.

Am J Hum Genet. 2016 Dec 1;99(6):1316-1324. doi: 10.1016/j.ajhg.2016.10.012. Epub 2016 Nov 23.

7.

Chimpanzee genomic diversity reveals ancient admixture with bonobos.

de Manuel M, Kuhlwilm M, Frandsen P, Sousa VC, Desai T, Prado-Martinez J, Hernandez-Rodriguez J, Dupanloup I, Lao O, Hallast P, Schmidt JM, Heredia-Genestar JM, Benazzo A, Barbujani G, Peter BM, Kuderna LF, Casals F, Angedakin S, Arandjelovic M, Boesch C, Kühl H, Vigilant L, Langergraber K, Novembre J, Gut M, Gut I, Navarro A, Carlsen F, Andrés AM, Siegismund HR, Scally A, Excoffier L, Tyler-Smith C, Castellano S, Xue Y, Hvilsom C, Marques-Bonet T.

Science. 2016 Oct 28;354(6311):477-481. Epub 2016 Oct 27.

8.

Great ape Y Chromosome and mitochondrial DNA phylogenies reflect subspecies structure and patterns of mating and dispersal.

Hallast P, Maisano Delser P, Batini C, Zadik D, Rocchi M, Schempp W, Tyler-Smith C, Jobling MA.

Genome Res. 2016 Apr;26(4):427-39. doi: 10.1101/gr.198754.115. Epub 2016 Feb 16.

9.

Large-scale recent expansion of European patrilineages shown by population resequencing.

Batini C, Hallast P, Zadik D, Delser PM, Benazzo A, Ghirotto S, Arroyo-Pardo E, Cavalleri GL, de Knijff P, Dupuy BM, Eriksen HA, King TE, de Munain AL, López-Parra AM, Loutradis A, Milasin J, Novelletto A, Pamjav H, Sajantila A, Tolun A, Winney B, Jobling MA.

Nat Commun. 2015 May 19;6:7152. doi: 10.1038/ncomms8152.

10.

The Y-chromosome tree bursts into leaf: 13,000 high-confidence SNPs covering the majority of known clades.

Hallast P, Batini C, Zadik D, Maisano Delser P, Wetton JH, Arroyo-Pardo E, Cavalleri GL, de Knijff P, Destro Bisol G, Dupuy BM, Eriksen HA, Jorde LB, King TE, Larmuseau MH, López de Munain A, López-Parra AM, Loutradis A, Milasin J, Novelletto A, Pamjav H, Sajantila A, Schempp W, Sears M, Tolun A, Tyler-Smith C, Van Geystelen A, Watkins S, Winney B, Jobling MA.

Mol Biol Evol. 2015 Mar;32(3):661-73. doi: 10.1093/molbev/msu327. Epub 2014 Dec 2.

11.

Recombination dynamics of a human Y-chromosomal palindrome: rapid GC-biased gene conversion, multi-kilobase conversion tracts, and rare inversions.

Hallast P, Balaresque P, Bowden GR, Ballereau S, Jobling MA.

PLoS Genet. 2013;9(7):e1003666. doi: 10.1371/journal.pgen.1003666. Epub 2013 Jul 25.

12.

Novel polymorphic AluYb8 insertion in the WNK1 gene is associated with blood pressure variation in Europeans.

Putku M, Kepp K, Org E, Sõber S, Comas D, Viigimaa M, Veldre G, Juhanson P, Hallast P, Tõnisson N; HYPertension in ESTonia (HYPEST), Shaw-Hawkins S, Caulfield MJ; BRItish Genetics of HyperTension (BRIGHT), Khusnutdinova E, Kožich V, Munroe PB, Laan M.

Hum Mutat. 2011 Jul;32(7):806-14. doi: 10.1002/humu.21508. Epub 2011 May 10.

13.

Genomics and genetics of gonadotropin beta-subunit genes: Unique FSHB and duplicated LHB/CGB loci.

Nagirnaja L, Rull K, Uusküla L, Hallast P, Grigorova M, Laan M.

Mol Cell Endocrinol. 2010 Nov 25;329(1-2):4-16. doi: 10.1016/j.mce.2010.04.024. Epub 2010 May 19. Review.

14.

High divergence in primate-specific duplicated regions: human and chimpanzee chorionic gonadotropin beta genes.

Hallast P, Saarela J, Palotie A, Laan M.

BMC Evol Biol. 2008 Jul 7;8:195. doi: 10.1186/1471-2148-8-195.

15.

Fine-scale quantification of HCG beta gene transcription in human trophoblastic and non-malignant non-trophoblastic tissues.

Rull K, Hallast P, Uusküla L, Jackson J, Punab M, Salumets A, Campbell RK, Laan M.

Mol Hum Reprod. 2008 Jan;14(1):23-31. Epub 2007 Nov 29.

16.

The evolution and genomic landscape of CGB1 and CGB2 genes.

Hallast P, Rull K, Laan M.

Mol Cell Endocrinol. 2007 Jan 2;260-262:2-11. Epub 2006 Oct 19.

17.
18.

Analysis of SNP profiles in patients with major depressive disorder.

Kõks S, Nikopensius T, Koido K, Maron E, Altmäe S, Heinaste E, Vabrit K, Tammekivi V, Hallast P, Kurg A, Shlik J, Vasar V, Metspalu A, Vasar E.

Int J Neuropsychopharmacol. 2006 Apr;9(2):167-74. Epub 2005 Jun 1.

PMID:
15927089
19.

Association study of 90 candidate gene polymorphisms in panic disorder.

Maron E, Nikopensius T, Kõks S, Altmäe S, Heinaste E, Vabrit K, Tammekivi V, Hallast P, Koido K, Kurg A, Metspalu A, Vasar E, Vasar V, Shlik J.

Psychiatr Genet. 2005 Mar;15(1):17-24.

PMID:
15722953
20.

Polymorphisms in wolframin (WFS1) gene are possibly related to increased risk for mood disorders.

Koido K, Kõks S, Nikopensius T, Maron E, Altmäe S, Heinaste E, Vabrit K, Tammekivi V, Hallast P, Kurg A, Shlik J, Vasar V, Metspalu A, Vasar E.

Int J Neuropsychopharmacol. 2005 Jun;8(2):235-44. Epub 2004 Oct 11.

PMID:
15473915

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