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Items: 1 to 50 of 357

1.

An analysis of the IS6/IS26 family of insertion sequences: is it a single family?

Harmer CJ, Hall RM.

Microb Genom. 2019 Sep 5. doi: 10.1099/mgen.0.000291. [Epub ahead of print]

2.

Corrigendum: Five decades of genome evolution in the globally distributed, extensively antibiotic-resistant Acinetobacter baumannii global clone 1.

Holt KE, Kenyon JJ, Hamidian M, Schultz MB, Pickard DJ, Dougan G, Hall RM.

Microb Genom. 2019 Jul;5(7). doi: 10.1099/mgen.0.000280. No abstract available.

3.

K units of the K8 and K54 capsular polysaccharides produced by Acinetobacter baumannii BAL 097 and RCH52 have the same structure but contain different di-N-acyl derivatives of legionaminic acid and are linked differently.

Arbatsky NP, Kenyon JJ, Kasimova AA, Shashkov AS, Shneider MM, Popova AV, Knirel YA, Hall RM.

Carbohydr Res. 2019 Sep 1;483:107745. doi: 10.1016/j.carres.2019.107745. Epub 2019 Jul 12.

PMID:
31349142
4.

B/O plasmid R16 from 1956 carries an In1-like class 1 integron embedded in a complex region containing parts of the Acinetobacter baumannii AbaR resistance island.

Moran RA, Hall RM.

Plasmid. 2019 Jul 18;105:102432. doi: 10.1016/j.plasmid.2019.102432. [Epub ahead of print]

PMID:
31326448
5.

The K46 and K5 capsular polysaccharides produced by Acinetobacter baumannii NIPH 329 and SDF have related structures and the side-chain non-ulosonic acids are 4-O-acetylated by phage-encoded O-acetyltransferases.

Kenyon JJ, Arbatsky NP, Shneider MM, Popova AV, Dmitrenok AS, Kasimova AA, Shashkov AS, Hall RM, Knirel YA.

PLoS One. 2019 Jun 20;14(6):e0218461. doi: 10.1371/journal.pone.0218461. eCollection 2019.

6.

The K90 capsular polysaccharide produced by Acinetobacter baumannii LUH5553 contains di-N-acetylpseudaminic acid and is structurally related to the K7 polysaccharide from A. baumannii LUH5533.

Senchenkova SN, Kenyon JJ, Jia T, Popova AV, Shneider MM, Kasimova AA, Shashkov AS, Liu B, Hall RM, Knirel YA.

Carbohydr Res. 2019 Jun 1;479:1-5. doi: 10.1016/j.carres.2019.04.008. Epub 2019 Apr 25.

PMID:
31075648
7.

Novel trimethoprim resistance gene, dfrA35, in IncC plasmids from Australia.

Ambrose SJ, Hall RM.

J Antimicrob Chemother. 2019 Jul 1;74(7):1863-1866. doi: 10.1093/jac/dkz148.

PMID:
30989199
8.

Mobilisation of a small Acinetobacter plasmid carrying an oriT transfer origin by conjugative RepAci6 plasmids.

Blackwell GA, Hall RM.

Plasmid. 2019 May;103:36-44. doi: 10.1016/j.plasmid.2019.04.002. Epub 2019 Apr 11.

PMID:
30981890
9.

Analysis of two B/O plasmids, R805a from 1972 and pCERC6 from 2008, reveals extensive mosaicism in B/O plasmid backbones.

Moran RA, Richardson IA, Hall RM.

Plasmid. 2019 Mar;102:62-70. doi: 10.1016/j.plasmid.2019.02.005. Epub 2019 Feb 27.

PMID:
30825470
10.

Genomic epidemiology of severe community-onset Acinetobacter baumannii infection.

Meumann EM, Anstey NM, Currie BJ, Piera KA, Kenyon JJ, Hall RM, Davis JS, Sarovich DS.

Microb Genom. 2019 Mar;5(3). doi: 10.1099/mgen.0.000258. Epub 2019 Feb 26.

11.

An IS26 variant with enhanced activity.

Pong CH, Harmer CJ, Ataide SF, Hall RM.

FEMS Microbiol Lett. 2019 Feb 1;366(3). pii: fnz031. doi: 10.1093/femsle/fnz031.

PMID:
30753435
12.

An improved plasmid size standard, 39R861.

Moran RA, Anantham S, Hall RM.

Plasmid. 2019 Mar;102:6-9. doi: 10.1016/j.plasmid.2019.01.002. Epub 2019 Feb 7.

PMID:
30738800
13.

Production of the K16 capsular polysaccharide by Acinetobacter baumannii ST25 isolate D4 involves a novel glycosyltransferase encoded in the KL16 gene cluster.

Kenyon JJ, Arbatsky NP, Sweeney EL, Shashkov AS, Shneider MM, Popova AV, Hall RM, Knirel YA.

Int J Biol Macromol. 2019 May 1;128:101-106. doi: 10.1016/j.ijbiomac.2019.01.080. Epub 2019 Jan 18.

PMID:
30664967
14.

Evolution of a clade of Acinetobacter baumannii global clone 1, lineage 1 via acquisition of carbapenem- and aminoglycoside-resistance genes and dispersion of ISAba1.

Hamidian M, Hawkey J, Wick R, Holt KE, Hall RM.

Microb Genom. 2019 Jan;5(1). doi: 10.1099/mgen.0.000242. Epub 2019 Jan 16.

15.

Complete Genome Sequence of WM99c, an Antibiotic-Resistant Acinetobacter baumannii Global Clone 2 (GC2) Strain Representing an Australian GC2 Lineage.

Nigro SJ, Wick R, Holt KE, Hall RM.

Microbiol Resour Announc. 2018 Dec 6;7(22). pii: e01199-18. doi: 10.1128/MRA.01199-18. eCollection 2018 Dec.

16.

The AbaR antibiotic resistance islands found in Acinetobacter baumannii global clone 1 - Structure, origin and evolution.

Hamidian M, Hall RM.

Drug Resist Updat. 2018 Nov;41:26-39. doi: 10.1016/j.drup.2018.10.003. Epub 2018 Nov 2. Review.

PMID:
30472242
17.

pBuzz: A cryptic rolling-circle plasmid from a commensal Escherichia coli has two inversely oriented oriTs and is mobilised by a B/O plasmid.

Moran RA, Hall RM.

Plasmid. 2019 Jan;101:10-19. doi: 10.1016/j.plasmid.2018.11.001. Epub 2018 Nov 22.

PMID:
30468749
18.

AbGRI1-5, a novel AbGRI1 variant in an Acinetobacter baumannii GC2 isolate from Adelaide, Australia.

Nigro SJ, Brown MH, Hall RM.

J Antimicrob Chemother. 2019 Mar 1;74(3):821-823. doi: 10.1093/jac/dky459. No abstract available.

PMID:
30452642
19.

Genetic structure of four plasmids found in Acinetobacter baumannii isolate D36 belonging to lineage 2 of global clone 1.

Hamidian M, Hall RM.

PLoS One. 2018 Sep 27;13(9):e0204357. doi: 10.1371/journal.pone.0204357. eCollection 2018.

20.

Recovery rate data for silicon nitride nanoparticle isolation using sodium polytungstate density gradients.

Patel J, Lal S, Wilshaw SP, Hall RM, Tipper JL.

Data Brief. 2018 Jun 19;19:1474-1476. doi: 10.1016/j.dib.2018.06.019. eCollection 2018 Aug.

21.

Structure of the K82 Capsular Polysaccharide from Acinetobacter baumannii LUH5534 Containing a d-Galactose 4,6-Pyruvic Acid Acetal.

Kasimova AA, Kenyon JJ, Arbatsky NP, Shashkov AS, Popova AV, Knirel YA, Hall RM.

Biochemistry (Mosc). 2018 Jul;83(7):831-835. doi: 10.1134/S0006297918070064.

22.

Does the intrinsic oxaAb (blaOXA-51-like) gene of Acinetobacter baumannii confer resistance to carbapenems when activated by ISAba1?

Nigro SJ, Hall RM.

J Antimicrob Chemother. 2018 Dec 1;73(12):3518-3520. doi: 10.1093/jac/dky334. No abstract available.

PMID:
30124881
23.

Development and optimisation data of a tissue digestion method for the isolation of orthopaedic wear particles.

Patel J, Lal S, Wilshaw SP, Hall RM, Tipper JL.

Data Brief. 2018 Jul 31;20:173-177. doi: 10.1016/j.dib.2018.07.060. eCollection 2018 Oct.

24.

Acinetobacter baumannii K20 and K21 capsular polysaccharide structures establish roles for UDP-glucose dehydrogenase Ugd2, pyruvyl transferase Ptr2 and two glycosyltransferases.

Kasimova AA, Kenyon JJ, Arbatsky NP, Shashkov AS, Popova AV, Shneider MM, Knirel YA, Hall RM.

Glycobiology. 2018 Nov 1;28(11):876-884. doi: 10.1093/glycob/cwy074.

PMID:
30107435
25.

Genetics of biosynthesis and structure of the K53 capsular polysaccharide of Acinetobacter baumannii D23 made up of a disaccharide K unit.

Shashkov AS, Kenyon JJ, Arbatsky NP, Shneider MM, Popova AV, Knirel YA, Hall RM.

Microbiology. 2018 Oct;164(10):1289-1292. doi: 10.1099/mic.0.000710. Epub 2018 Aug 13.

PMID:
30102147
26.

Evolution and typing of IncC plasmids contributing to antibiotic resistance in Gram-negative bacteria.

Ambrose SJ, Harmer CJ, Hall RM.

Plasmid. 2018 Sep;99:40-55. doi: 10.1016/j.plasmid.2018.08.001. Epub 2018 Aug 3. Review.

PMID:
30081066
27.

Validation of a novel particle isolation procedure using particle doped tissue samples.

Patel J, Lal S, Wilshaw SP, Hall RM, Tipper JL.

Data Brief. 2018 May 1;18:1802-1807. doi: 10.1016/j.dib.2018.04.096. eCollection 2018 Jun.

28.

Biological Impact of Silicon Nitride for Orthopaedic Applications: Role of Particle Size, Surface Composition and Donor Variation.

Lal S, Caseley EA, Hall RM, Tipper JL.

Sci Rep. 2018 Jun 14;8(1):9109. doi: 10.1038/s41598-018-27494-y.

29.

Recovery of low volumes of wear debris from rat stifle joint tissues using a novel particle isolation method.

Patel J, Lal S, Nuss K, Wilshaw SP, von Rechenberg B, Hall RM, Tipper JL.

Acta Biomater. 2018 Apr 15;71:339-350. doi: 10.1016/j.actbio.2018.02.030. Epub 2018 Mar 2.

30.

Compatibility and entry exclusion of IncA and IncC plasmids revisited: IncA and IncC plasmids are compatible.

Ambrose SJ, Harmer CJ, Hall RM.

Plasmid. 2018 Mar - May;96-97:7-12. doi: 10.1016/j.plasmid.2018.02.002. Epub 2018 Feb 24.

PMID:
29486211
31.

Intermittent fasting in Type 2 diabetes mellitus and the risk of hypoglycaemia: a randomized controlled trial.

Corley BT, Carroll RW, Hall RM, Weatherall M, Parry-Strong A, Krebs JD.

Diabet Med. 2018 May;35(5):588-594. doi: 10.1111/dme.13595. Epub 2018 Feb 27.

PMID:
29405359
32.

Acinetobacter baumannii isolate BAL_212 from Vietnam produces the K57 capsular polysaccharide containing a rarely occurring amino sugar N-acetylviosamine.

Kenyon JJ, Kasimova AA, Shashkov AS, Hall RM, Knirel YA.

Microbiology. 2018 Feb;164(2):217-220. doi: 10.1099/mic.0.000598. Epub 2018 Jan 4.

PMID:
29300154
33.

Concentration and size distribution data of silicon nitride nanoparticles measured using nanoparticle tracking analysis.

Lal S, Hall RM, Tipper JL.

Data Brief. 2017 Sep 15;15:821-823. doi: 10.1016/j.dib.2017.09.011. eCollection 2017 Dec.

34.

Acinetobacter baumannii K13 and K73 capsular polysaccharides differ only in K-unit side branches of novel non-2-ulosonic acids: di-N-acetylated forms of either acinetaminic acid or 8-epiacinetaminic acid.

Kenyon JJ, Kasimova AA, Notaro A, Arbatsky NP, Speciale I, Shashkov AS, De Castro C, Hall RM, Knirel YA.

Carbohydr Res. 2017 Nov 27;452:149-155. doi: 10.1016/j.carres.2017.10.005. Epub 2017 Oct 19.

PMID:
29100177
35.

Evolution in situ of ARI-A in pB2-1, a type 1 IncC plasmid recovered from Klebsiella pneumoniae, and stability of Tn4352B.

Harmer CJ, Hall RM.

Plasmid. 2017 Nov;94:7-14. doi: 10.1016/j.plasmid.2017.10.001. Epub 2017 Oct 16.

PMID:
29050976
36.

A large plasmid, pD46-4, carrying a complex resistance region in an extensively antibiotic-resistant ST25 Acinetobacter baumannii.

Nigro SJ, Hall RM.

J Antimicrob Chemother. 2017 Dec 1;72(12):3496-3498. doi: 10.1093/jac/dkx287. No abstract available.

PMID:
28961764
37.

Evolution of Regions Containing Antibiotic Resistance Genes in FII-2-FIB-1 ColV-Colla Virulence Plasmids.

Moran RA, Hall RM.

Microb Drug Resist. 2018 May;24(4):411-421. doi: 10.1089/mdr.2017.0177. Epub 2017 Sep 18.

PMID:
28922058
38.

5,7-Di-N-acetyl-8-epiacinetaminic acid: A new non-2-ulosonic acid found in the K73 capsule produced by an Acinetobacter baumannii isolate from Singapore.

Kenyon JJ, Notaro A, Hsu LY, De Castro C, Hall RM.

Sci Rep. 2017 Sep 12;7(1):11357. doi: 10.1038/s41598-017-11166-4.

39.

Corrected Genome Sequence of Acinetobacter baumannii Strain AB0057, an Antibiotic-Resistant Isolate from Lineage 1 of Global Clone 1.

Hamidian M, Venepally P, Hall RM, Adams MD.

Genome Announc. 2017 Aug 31;5(35). pii: e00836-17. doi: 10.1128/genomeA.00836-17.

40.

Targeted conservative formation of cointegrates between two DNA molecules containing IS26 occurs via strand exchange at either IS end.

Harmer CJ, Hall RM.

Mol Microbiol. 2017 Nov;106(3):409-418. doi: 10.1111/mmi.13774. Epub 2017 Sep 4.

41.
42.

Origin of the AbGRI1 antibiotic resistance island found in the comM gene of Acinetobacter baumannii GC2 isolates.

Hamidian M, Hall RM.

J Antimicrob Chemother. 2017 Oct 1;72(10):2944-2947. doi: 10.1093/jac/dkx206. No abstract available.

PMID:
28666372
43.

pIP40a, a type 1 IncC plasmid from 1969 carries the integrative element GIsul2 and a novel class II mercury resistance transposon.

Harmer CJ, Hamidian M, Hall RM.

Plasmid. 2017 Jul;92:17-25. doi: 10.1016/j.plasmid.2017.05.004. Epub 2017 May 31.

PMID:
28577759
44.

The tet39 Determinant and the msrE-mphE Genes in Acinetobacter Plasmids Are Each Part of Discrete Modules Flanked by Inversely Oriented pdif (XerC-XerD) Sites.

Blackwell GA, Hall RM.

Antimicrob Agents Chemother. 2017 Jul 25;61(8). pii: e00780-17. doi: 10.1128/AAC.00780-17. Print 2017 Aug.

45.

Acinetobacter baumannii K11 and K83 capsular polysaccharides have the same 6-deoxy-l-talose-containing pentasaccharide K units but different linkages between the K units.

Kenyon JJ, Shashkov AS, Senchenkova SN, Shneider MM, Liu B, Popova AV, Arbatsky NP, Miroshnikov KA, Wang L, Knirel YA, Hall RM.

Int J Biol Macromol. 2017 Oct;103:648-655. doi: 10.1016/j.ijbiomac.2017.05.082. Epub 2017 May 17.

PMID:
28528003
46.

Problems with the Oxford Multilocus Sequence Typing Scheme for Acinetobacter baumannii: Do Sequence Type 92 (ST92) and ST109 Exist?

Hamidian M, Nigro SJ, Hall RM.

J Clin Microbiol. 2017 Jul;55(7):2287-2289. doi: 10.1128/JCM.00533-17. Epub 2017 May 10. No abstract available.

47.

Database for the ampC alleles in Acinetobacter baumannii.

Karah N, Jolley KA, Hall RM, Uhlin BE.

PLoS One. 2017 May 1;12(5):e0176695. doi: 10.1371/journal.pone.0176695. eCollection 2017.

48.

The KL24 gene cluster and a genomic island encoding a Wzy polymerase contribute genes needed for synthesis of the K24 capsular polysaccharide by the multiply antibiotic resistant Acinetobacter baumannii isolate RCH51.

Kenyon JJ, Kasimova AA, Shneider MM, Shashkov AS, Arbatsky NP, Popova AV, Miroshnikov KA, Hall RM, Knirel YA.

Microbiology. 2017 Mar;163(3):355-363. doi: 10.1099/mic.0.000430.

PMID:
28356169
49.

Repeated local emergence of carbapenem-resistant Acinetobacter baumannii in a single hospital ward.

Schultz MB, Pham Thanh D, Tran Do Hoan N, Wick RR, Ingle DJ, Hawkey J, Edwards DJ, Kenyon JJ, Phu Huong Lan N, Campbell JI, Thwaites G, Thi Khanh Nhu N, Hall RM, Fournier-Level A, Baker S, Holt KE.

Microb Genom. 2016 Mar 2;2(3):e000050. doi: 10.1099/mgen.0.000050. eCollection 2016 Mar.

50.

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