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DUX4-Induced Histone Variants H3.X and H3.Y Mark DUX4 Target Genes for Expression.

Resnick R, Wong CJ, Hamm DC, Bennett SR, Skene PJ, Hake SB, Henikoff S, van der Maarel SM, Tapscott SJ.

Cell Rep. 2019 Nov 12;29(7):1812-1820.e5. doi: 10.1016/j.celrep.2019.10.025.


Reconstructing the Transcriptional Ontogeny of Maize and Sorghum Supports an Inverse Hourglass Model of Inflorescence Development.

Leiboff S, Hake S.

Curr Biol. 2019 Oct 21;29(20):3410-3419.e3. doi: 10.1016/j.cub.2019.08.044. Epub 2019 Oct 3.


Using wild relatives to improve maize.

Hake S, Richardson A.

Science. 2019 Aug 16;365(6454):640-641. doi: 10.1126/science.aay5299. No abstract available.


Chemotherapeutic Drugs Inhibiting Topoisomerase 1 Activity Impede Cytokine-Induced and NF-κB p65-Regulated Gene Expression.

Riedlinger T, Bartkuhn M, Zimmermann T, Hake SB, Nist A, Stiewe T, Kracht M, Schmitz ML.

Cancers (Basel). 2019 Jun 25;11(6). pii: E883. doi: 10.3390/cancers11060883.


The Second Site Modifier, Sympathy for the ligule, Encodes a Homolog of Arabidopsis ENHANCED DISEASE RESISTANCE4 and Rescues the Liguleless narrow Maize Mutant.

Anderson A, St Aubin B, Abraham-Juárez MJ, Leiboff S, Shen Z, Briggs S, Brunkard JO, Hake S.

Plant Cell. 2019 Aug;31(8):1829-1844. doi: 10.1105/tpc.18.00840. Epub 2019 Jun 19.


The histone variant H2A.Z in gene regulation.

Giaimo BD, Ferrante F, Herchenröther A, Hake SB, Borggrefe T.

Epigenetics Chromatin. 2019 Jun 14;12(1):37. doi: 10.1186/s13072-019-0274-9. Review.


Identification of cup-shaped cotyledon: New Ways to Think about Organ Initiation.

Hake S.

Plant Cell. 2019 Jun;31(6):1202-1203. doi: 10.1105/tpc.19.00127. Epub 2019 Apr 29. No abstract available.


Tasselseed5 overexpresses a wound-inducible enzyme, ZmCYP94B1, that affects jasmonate catabolism, sex determination, and plant architecture in maize.

Lunde C, Kimberlin A, Leiboff S, Koo AJ, Hake S.

Commun Biol. 2019 Mar 25;2:114. doi: 10.1038/s42003-019-0354-1. eCollection 2019.


Drawing a Line: Grasses and Boundaries.

Richardson AE, Hake S.

Plants (Basel). 2018 Dec 25;8(1). pii: E4. doi: 10.3390/plants8010004. Review.


PWWP2A binds distinct chromatin moieties and interacts with an MTA1-specific core NuRD complex.

Link S, Spitzer RMM, Sana M, Torrado M, Völker-Albert MC, Keilhauer EC, Burgold T, Pünzeler S, Low JKK, Lindström I, Nist A, Regnard C, Stiewe T, Hendrich B, Imhof A, Mann M, Mackay JP, Bartkuhn M, Hake SB.

Nat Commun. 2018 Oct 16;9(1):4300. doi: 10.1038/s41467-018-06665-5.


GRF-interacting factor1 Regulates Shoot Architecture and Meristem Determinacy in Maize.

Zhang D, Sun W, Singh R, Zheng Y, Cao Z, Li M, Lunde C, Hake S, Zhang Z.

Plant Cell. 2018 Feb;30(2):360-374. doi: 10.1105/tpc.17.00791. Epub 2018 Feb 5.


PWWP2A: A novel mitosis link?

Link S, Hake SB.

Cell Cycle. 2017 Oct 18;16(20):1849-1850. doi: 10.1080/15384101.2017.1372523. Epub 2017 Sep 21. No abstract available.


Multivalent binding of PWWP2A to H2A.Z regulates mitosis and neural crest differentiation.

Pünzeler S, Link S, Wagner G, Keilhauer EC, Kronbeck N, Spitzer RM, Leidescher S, Markaki Y, Mentele E, Regnard C, Schneider K, Takahashi D, Kusakabe M, Vardabasso C, Zink LM, Straub T, Bernstein E, Harata M, Leonhardt H, Mann M, Rupp RA, Hake SB.

EMBO J. 2017 Aug 1;36(15):2263-2279. doi: 10.15252/embj.201695757. Epub 2017 Jun 23.


Impact of intra-tumoral IL17A and IL32 gene expression on T-cell responses and lymph node status in breast cancer patients.

Bhat S, Gardi N, Hake S, Kotian N, Sawant S, Kannan S, Parmar V, Desai S, Dutt A, Joshi NN.

J Cancer Res Clin Oncol. 2017 Sep;143(9):1745-1756. doi: 10.1007/s00432-017-2431-5. Epub 2017 May 3.


KNOTTED1 Cofactors, BLH12 and BLH14, Regulate Internode Patterning and Vein Anastomosis in Maize.

Tsuda K, Abraham-Juarez MJ, Maeno A, Dong Z, Aromdee D, Meeley R, Shiroishi T, Nonomura KI, Hake S.

Plant Cell. 2017 May;29(5):1105-1118. doi: 10.1105/tpc.16.00967. Epub 2017 Apr 5.


H3.Y discriminates between HIRA and DAXX chaperone complexes and reveals unexpected insights into human DAXX-H3.3-H4 binding and deposition requirements.

Zink LM, Delbarre E, Eberl HC, Keilhauer EC, Bönisch C, Pünzeler S, Bartkuhn M, Collas P, Mann M, Hake SB.

Nucleic Acids Res. 2017 Jun 2;45(10):5691-5706. doi: 10.1093/nar/gkx131.


The Maize MID-COMPLEMENTING ACTIVITY Homolog CELL NUMBER REGULATOR13/NARROW ODD DWARF Coordinates Organ Growth and Tissue Patterning.

Rosa M, Abraham-Juárez MJ, Lewis MW, Fonseca JP, Tian W, Ramirez V, Luan S, Pauly M, Hake S.

Plant Cell. 2017 Mar;29(3):474-490. doi: 10.1105/tpc.16.00878. Epub 2017 Mar 2.


Variants of core histones and their roles in cell fate decisions, development and cancer.

Buschbeck M, Hake SB.

Nat Rev Mol Cell Biol. 2017 May;18(5):299-314. doi: 10.1038/nrm.2016.166. Epub 2017 Feb 1. Review.


Histone variant H2A.Z.2: A novel driver of melanoma progression.

Vardabasso C, Hake SB, Bernstein E.

Mol Cell Oncol. 2015 Sep 16;3(2):e1073417. doi: 10.1080/23723556.2015.1073417. eCollection 2016 Mar.


Histone variants: nuclear function and disease.

Zink LM, Hake SB.

Curr Opin Genet Dev. 2016 Apr;37:82-89. doi: 10.1016/j.gde.2015.12.002. Epub 2016 Jan 28. Review.


Keep on growing: building and patterning leaves in the grasses.

Lewis MW, Hake S.

Curr Opin Plant Biol. 2016 Feb;29:80-6. doi: 10.1016/j.pbi.2015.11.008. Epub 2016 Jan 2. Review.


Diverse functions of KNOX transcription factors in the diploid body plan of plants.

Tsuda K, Hake S.

Curr Opin Plant Biol. 2015 Oct;27:91-6. doi: 10.1016/j.pbi.2015.06.015. Epub 2015 Jul 17. Review.


Histone Variant H2A.Z.2 Mediates Proliferation and Drug Sensitivity of Malignant Melanoma.

Vardabasso C, Gaspar-Maia A, Hasson D, Pünzeler S, Valle-Garcia D, Straub T, Keilhauer EC, Strub T, Dong J, Panda T, Chung CY, Yao JL, Singh R, Segura MF, Fontanals-Cirera B, Verma A, Mann M, Hernando E, Hake SB, Bernstein E.

Mol Cell. 2015 Jul 2;59(1):75-88. doi: 10.1016/j.molcel.2015.05.009. Epub 2015 Jun 4.


Organogenesis in plants: initiation and elaboration of leaves.

Sluis A, Hake S.

Trends Genet. 2015 Jun;31(6):300-6. doi: 10.1016/j.tig.2015.04.004. Epub 2015 May 20. Review.


Functionally different PIN proteins control auxin flux during bulbil development in Agave tequilana.

Abraham Juárez MJ, Hernández Cárdenas R, Santoyo Villa JN, O'Connor D, Sluis A, Hake S, Ordaz-Ortiz J, Terry L, Simpson J.

J Exp Bot. 2015 Jul;66(13):3893-905. doi: 10.1093/jxb/erv191. Epub 2015 Apr 23.


Genetic, evolutionary and plant breeding insights from the domestication of maize.

Hake S, Ross-Ibarra J.

Elife. 2015 Mar 25;4. doi: 10.7554/eLife.05861. Review.


The CENP-T C-terminus is exclusively proximal to H3.1 and not to H3.2 or H3.3.

Abendroth C, Hofmeister A, Hake SB, Kamweru PK, Miess E, Dornblut C, Küffner I, Deng W, Leonhardt H, Orthaus S, Hoischen C, Diekmann S.

Int J Mol Sci. 2015 Mar 12;16(3):5839-63. doi: 10.3390/ijms16035839.


Practical challenges in conducting respiratory studies.

Hake SD, Patil ML, Shah TM, Gokhale PM, Suvarna V.

Perspect Clin Res. 2015 Jan-Mar;6(1):15-9. doi: 10.4103/2229-3485.148798. Review.


Transcriptomic analyses indicate that maize ligule development recapitulates gene expression patterns that occur during lateral organ initiation.

Johnston R, Wang M, Sun Q, Sylvester AW, Hake S, Scanlon MJ.

Plant Cell. 2014 Dec;26(12):4718-32. doi: 10.1105/tpc.114.132688. Epub 2014 Dec 16.


Maize SBP-box transcription factors unbranched2 and unbranched3 affect yield traits by regulating the rate of lateral primordia initiation.

Chuck GS, Brown PJ, Meeley R, Hake S.

Proc Natl Acad Sci U S A. 2014 Dec 30;111(52):18775-80. doi: 10.1073/pnas.1407401112. Epub 2014 Dec 15.


The dicer-like1 homolog fuzzy tassel is required for the regulation of meristem determinacy in the inflorescence and vegetative growth in maize.

Thompson BE, Basham C, Hammond R, Ding Q, Kakrana A, Lee TF, Simon SA, Meeley R, Meyers BC, Hake S.

Plant Cell. 2014 Dec;26(12):4702-17. doi: 10.1105/tpc.114.132670. Epub 2014 Dec 2.


Structure-guided mutational analysis reveals the functional requirements for product specificity of DOT1 enzymes.

Dindar G, Anger AM, Mehlhorn C, Hake SB, Janzen CJ.

Nat Commun. 2014 Nov 12;5:5313. doi: 10.1038/ncomms6313.


Gene regulatory interactions at lateral organ boundaries in maize.

Lewis MW, Bolduc N, Hake K, Htike Y, Hay A, Candela H, Hake S.

Development. 2014 Dec;141(23):4590-7. doi: 10.1242/dev.111955. Epub 2014 Oct 30.


Natural variation at sympathy for the ligule controls penetrance of the semidominant Liguleless narrow-R mutation in Zea mays.

Buescher EM, Moon J, Runkel A, Hake S, Dilkes BP.

G3 (Bethesda). 2014 Oct 24;4(12):2297-306. doi: 10.1534/g3.114.014183.


Genome-wide study of KNOX regulatory network reveals brassinosteroid catabolic genes important for shoot meristem function in rice.

Tsuda K, Kurata N, Ohyanagi H, Hake S.

Plant Cell. 2014 Sep;26(9):3488-500. doi: 10.1105/tpc.114.129122. Epub 2014 Sep 5.


Interleukin 6 -174G>C polymorphism and cancer risk: meta-analysis reveals a site dependent differential influence in Ancestral North Indians.

Joshi N, Kannan S, Kotian N, Bhat S, Kale M, Hake S.

Hum Immunol. 2014 Aug;75(8):901-8. doi: 10.1016/j.humimm.2014.06.018. Epub 2014 Jun 30. Review.


Getting down to the core of histone modifications.

Jack AP, Hake SB.

Chromosoma. 2014 Aug;123(4):355-71. doi: 10.1007/s00412-014-0465-x. Epub 2014 May 2. Review.


The histone variant H2A.Bbd is enriched at sites of DNA synthesis.

Sansoni V, Casas-Delucchi CS, Rajan M, Schmidt A, Bönisch C, Thomae AW, Staege MS, Hake SB, Cardoso MC, Imhof A.

Nucleic Acids Res. 2014 Jun;42(10):6405-20. doi: 10.1093/nar/gku303. Epub 2014 Apr 20.


Histone glutamine methylation afFACTing rDNA transcription.

Leonhardt H, Hake SB.

Cell Res. 2014 Mar;24(3):261-2. doi: 10.1038/cr.2014.22. Epub 2014 Feb 14.


A division in PIN-mediated auxin patterning during organ initiation in grasses.

O'Connor DL, Runions A, Sluis A, Bragg J, Vogel JP, Prusinkiewicz P, Hake S.

PLoS Comput Biol. 2014 Jan 30;10(1):e1003447. doi: 10.1371/journal.pcbi.1003447. eCollection 2014 Jan.


Regulatory modules controlling maize inflorescence architecture.

Eveland AL, Goldshmidt A, Pautler M, Morohashi K, Liseron-Monfils C, Lewis MW, Kumari S, Hiraga S, Yang F, Unger-Wallace E, Olson A, Hake S, Vollbrecht E, Grotewold E, Ware D, Jackson D.

Genome Res. 2014 Mar;24(3):431-43. doi: 10.1101/gr.166397.113. Epub 2013 Dec 4.


Unequal redundancy in maize knotted1 homeobox genes.

Bolduc N, Tyers RG, Freeling M, Hake S.

Plant Physiol. 2014 Jan;164(1):229-38. doi: 10.1104/pp.113.228791. Epub 2013 Nov 11.


Opposing effects of pro- and anti-inflammatory cytokine gene polymorphisms on the risk for breast cancer in western Indian women: a pilot study.

Joshi NN, Bhat S, Hake S, Kale M, Kannan S.

Int J Immunogenet. 2014 Jun;41(3):242-9. doi: 10.1111/iji.12098. Epub 2013 Oct 25.


Histone h3 glutathionylation in proliferating mammalian cells destabilizes nucleosomal structure.

García-Giménez JL, Òlaso G, Hake SB, Bönisch C, Wiedemann SM, Markovic J, Dasí F, Gimeno A, Pérez-Quilis C, Palacios O, Capdevila M, Viña J, Pallardó FV.

Antioxid Redox Signal. 2013 Oct 20;19(12):1305-20. doi: 10.1089/ars.2012.5021. Epub 2013 May 21.


H3K56me3 is a novel, conserved heterochromatic mark that largely but not completely overlaps with H3K9me3 in both regulation and localization.

Jack AP, Bussemer S, Hahn M, Pünzeler S, Snyder M, Wells M, Csankovszki G, Solovei I, Schotta G, Hake SB.

PLoS One. 2013;8(2):e51765. doi: 10.1371/journal.pone.0051765. Epub 2013 Feb 22.


The Liguleless narrow mutation affects proximal-distal signaling and leaf growth.

Moon J, Candela H, Hake S.

Development. 2013 Jan 15;140(2):405-12. doi: 10.1242/dev.085787.


How to pattern a leaf.

Bolduc N, O'Connor D, Moon J, Lewis M, Hake S.

Cold Spring Harb Symp Quant Biol. 2012;77:47-51. doi: 10.1101/sqb.2012.77.014613. Epub 2012 Nov 21.


Histone H2A variants in nucleosomes and chromatin: more or less stable?

Bönisch C, Hake SB.

Nucleic Acids Res. 2012 Nov;40(21):10719-41. doi: 10.1093/nar/gks865. Epub 2012 Sep 21. Review.


Unraveling the KNOTTED1 regulatory network in maize meristems.

Bolduc N, Yilmaz A, Mejia-Guerra MK, Morohashi K, O'Connor D, Grotewold E, Hake S.

Genes Dev. 2012 Aug 1;26(15):1685-90. doi: 10.1101/gad.193433.112.


A unified phylogeny-based nomenclature for histone variants.

Talbert PB, Ahmad K, Almouzni G, Ausió J, Berger F, Bhalla PL, Bonner WM, Cande WZ, Chadwick BP, Chan SW, Cross GA, Cui L, Dimitrov SI, Doenecke D, Eirin-López JM, Gorovsky MA, Hake SB, Hamkalo BA, Holec S, Jacobsen SE, Kamieniarz K, Khochbin S, Ladurner AG, Landsman D, Latham JA, Loppin B, Malik HS, Marzluff WF, Pehrson JR, Postberg J, Schneider R, Singh MB, Smith MM, Thompson E, Torres-Padilla ME, Tremethick DJ, Turner BM, Waterborg JH, Wollmann H, Yelagandula R, Zhu B, Henikoff S.

Epigenetics Chromatin. 2012 Jun 21;5:7. doi: 10.1186/1756-8935-5-7.

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