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Response to letter from Dr Oliviera in relation to our publication: A study in a rat initiation-promotion bladder tumour model demonstrated no promoter/progressor potential of dapagliflozin.

Billger M, Kirk J, Chang J, Bédard A, Attalla B, Haile S, Söderberg M.

Regul Toxicol Pharmacol. 2019 Aug;106:347-348. doi: 10.1016/j.yrtph.2019.05.009. Epub 2019 May 13. No abstract available.


Efficacy of pharmacotherapy for OSA in adults: A systematic review and network meta-analysis.

Gaisl T, Haile SR, Thiel S, Osswald M, Kohler M.

Sleep Med Rev. 2019 Apr 19;46:74-86. doi: 10.1016/j.smrv.2019.04.009. [Epub ahead of print] Review.


Predicting Survival of Small Intestine Neuroendocrine Tumors: Experience From a Major Referral Center.

Kelly S, Aalberg J, Agathis A, Phillips K, Haile S, Haines K, Kang Kim M, Divino CM.

Pancreas. 2019 Apr;48(4):514-518. doi: 10.1097/MPA.0000000000001296.


Complete Genome Sequences of 12 B1 Cluster Mycobacteriophages, Gareth, JangoPhett, Kailash, MichaelPhcott, PhenghisKhan, Phleuron, Phergie, PhrankReynolds, PhrodoBaggins, Phunky, Vaticameos, and Virapocalypse.

Apellido KA, Balchander D, Erlich MC, Gocal JK, Gocal WA, Haile S, Kang AK, Koduri S, Natrajan M, Parikh AA, Tata RK, Walor TA, Wong BM, Nako S, Tran T, Islam E, Mammen MP; Drexel University SEA-PHAGES annotators 2016; Drexel University SEA-PHAGES annotators 2017; Drexel University SEA-PHAGES annotators 2018, Ball SL, Bollivar DW, Butela KA, Pope WH, McDonald MT, Tang CA, Dalia RR, Smith KPW, Little JL, Moyer AE, Gurney SMR.

Microbiol Resour Announc. 2019 Feb 21;8(8). pii: e01387-18. doi: 10.1128/MRA.01387-18. eCollection 2019 Feb.


A high-throughput protocol for isolating cell-free circulating tumor DNA from peripheral blood.

Pandoh PK, Corbett RD, McDonald H, Alcaide M, Kirk H, Trinh E, Haile S, MacLeod T, Smailus D, Bilobram S, Mungall AJ, Ma Y, Moore RA, Coope R, Zhao Y, Jones SJ, Holt RA, Karsan A, Morin RD, Marra MA.

Biotechniques. 2019 Feb;66(2):85-92. doi: 10.2144/btn-2018-0148.


A study in a rat initiation-promotion bladder tumour model demonstrated no promoter/progressor potential of dapagliflozin.

Billger M, Kirk J, Chang J, Bédard A, Attalla B, Haile S, Söderberg M.

Regul Toxicol Pharmacol. 2019 Apr;103:166-173. doi: 10.1016/j.yrtph.2019.01.031. Epub 2019 Jan 25.


Effects of short-term continuous positive airway pressure withdrawal on cerebral vascular reactivity measured by blood oxygen level-dependent magnetic resonance imaging in obstructive sleep apnoea: a randomised controlled trial.

Thiel S, Lettau F, Rejmer P, Rossi C, Haile SR, Schwarz EI, Stöberl AS, Sievi NA, Boss A, Becker AS, Winklhofer S, Stradling JR, Kohler M.

Eur Respir J. 2019 Feb 21;53(2). pii: 1801854. doi: 10.1183/13993003.01854-2018. Print 2019 Feb.


Sources of erroneous sequences and artifact chimeric reads in next generation sequencing of genomic DNA from formalin-fixed paraffin-embedded samples.

Haile S, Corbett RD, Bilobram S, Bye MH, Kirk H, Pandoh P, Trinh E, MacLeod T, McDonald H, Bala M, Miller D, Novik K, Coope RJ, Moore RA, Zhao Y, Mungall AJ, Ma Y, Holt RA, Jones SJ, Marra MA.

Nucleic Acids Res. 2019 Jan 25;47(2):e12. doi: 10.1093/nar/gky1142.


Response to the Letter to the Editor Submitted by Dr. JoAnn C. L. Schuh.

Woicke J, Haile S, Mysore J, Peden M, Lejeune T, Sanderson TP, Brodie T.

Toxicol Pathol. 2018 Aug;46(6):721. doi: 10.1177/0192623318794180. No abstract available.


Suppression of atom motion and metal deposition in mixed ionic electronic conductors.

Qiu P, Agne MT, Liu Y, Zhu Y, Chen H, Mao T, Yang J, Zhang W, Haile SM, Zeier WG, Janek J, Uher C, Shi X, Chen L, Snyder GJ.

Nat Commun. 2018 Jul 25;9(1):2910. doi: 10.1038/s41467-018-05248-8.


Vitamin D status contributes to the antimicrobial activity of macrophages against Mycobacterium leprae.

Kim EW, Teles RMB, Haile S, Liu PT, Modlin RL.

PLoS Negl Trop Dis. 2018 Jul 2;12(7):e0006608. doi: 10.1371/journal.pntd.0006608. eCollection 2018 Jul.


Clinical and radiographic course of early undifferentiated arthritis under treatment is not dependent on the number of joints with erosions at diagnosis: results from the Swiss prospective observational cohort.

Mueller RB, Kaegi T, Haile SR, Schulze-Koops H, Schiff M, von Kempis J.

RMD Open. 2018 Jun 6;4(1):e000673. doi: 10.1136/rmdopen-2018-000673. eCollection 2018.


BMI-mortality association: shape independent of smoking status but different for chronic lung disease and lung cancer.

Faeh D, Kaufmann M, Haile SR, Bopp M.

Int J Chron Obstruct Pulmon Dis. 2018 Jun 6;13:1851-1855. doi: 10.2147/COPD.S157629. eCollection 2018.


Out-of-Plane Ionic Conductivity Measurement Configuration for High-Throughput Experiments.

Huang R, Kucharczyk CJ, Liang Y, Zhang X, Takeuchi I, Haile SM.

ACS Comb Sci. 2018 Jul 9;20(7):443-450. doi: 10.1021/acscombsci.8b00037. Epub 2018 Jun 12.


Pulmonary involvement in Fabry disease: effect of plasma globotriaosylsphingosine and time to initiation of enzyme replacement therapy.

Franzen D, Haile SR, Kasper DC, Mechtler TP, Flammer AJ, Krayenbühl PA, Nowak A.

BMJ Open Respir Res. 2018 Apr 21;5(1):e000277. doi: 10.1136/bmjresp-2018-000277. eCollection 2018.


Potent antitumor efficacy of anti-GD2 CAR T cells in H3-K27M+ diffuse midline gliomas.

Mount CW, Majzner RG, Sundaresh S, Arnold EP, Kadapakkam M, Haile S, Labanieh L, Hulleman E, Woo PJ, Rietberg SP, Vogel H, Monje M, Mackall CL.

Nat Med. 2018 May;24(5):572-579. doi: 10.1038/s41591-018-0006-x. Epub 2018 Apr 16.


High-Throughput Flow Cytometric Method for the Simultaneous Measurement of CAR-T Cell Characterization and Cytotoxicity against Solid Tumor Cell Lines.

Martinez EM, Klebanoff SD, Secrest S, Romain G, Haile ST, Emtage PCR, Gilbert AE.

SLAS Discov. 2018 Aug;23(7):603-612. doi: 10.1177/2472555218768745. Epub 2018 Apr 10.


Physical activity and sedentary behavior in preschoolers: a longitudinal assessment of trajectories and determinants.

Schmutz EA, Haile SR, Leeger-Aschmann CS, Kakebeeke TH, Zysset AE, Messerli-Bürgy N, Stülb K, Arhab A, Meyer AH, Munsch S, Puder JJ, Jenni OG, Kriemler S.

Int J Behav Nutr Phys Act. 2018 Apr 4;15(1):35. doi: 10.1186/s12966-018-0670-8.


Large-scale external validation and comparison of prognostic models: an application to chronic obstructive pulmonary disease.

Guerra B, Haile SR, Lamprecht B, Ramírez AS, Martinez-Camblor P, Kaiser B, Alfageme I, Almagro P, Casanova C, Esteban-González C, Soler-Cataluña JJ, de-Torres JP, Miravitlles M, Celli BR, Marin JM, Ter Riet G, Sobradillo P, Lange P, Garcia-Aymerich J, Antó JM, Turner AM, Han MK, Langhammer A, Leivseth L, Bakke P, Johannessen A, Oga T, Cosio B, Ancochea-Bermúdez J, Echazarreta A, Roche N, Burgel PR, Sin DD, Soriano JB, Puhan MA; 3CIA collaboration.

BMC Med. 2018 Mar 2;16(1):33. doi: 10.1186/s12916-018-1013-y.


Spontaneous Findings in the Eyes of Cynomolgus Monkeys ( Macaca fascicularis) of Mauritian Origin.

Woicke J, Haile S, Mysore J, Peden WM, Lejeune T, Sanderson T, Brodie T.

Toxicol Pathol. 2018 Apr;46(3):273-282. doi: 10.1177/0192623318758619. Epub 2018 Feb 25.


Evaluation of Uracil, Sodium Ascorbate, and Rosiglitazone as Promoters of Urinary Bladder Transitional Cell Carcinomas in Male Sprague-Dawley Rats.

Tirmenstein M, Janovitz E, Dorr T, Song Y, Chen SJ, Granaldi K, Chadwick KD, Mangipudy R, Graziano M, Attalla B, Haile S, Czajkowski M, Foster JR, Bergholm AM, Billger M, Söderberg M.

Toxicol Pathol. 2018 Feb;46(2):147-157. doi: 10.1177/0192623318756004.


Correction to: Multiple Score Comparison: a network meta-analysis approach to comparison and external validation of prognostic scores.

Haile SR, Guerra B, Soriano JB, Puhan MA.

BMC Med Res Methodol. 2018 Feb 12;18(1):21. doi: 10.1186/s12874-018-0481-2.


VS2DRTI: Simulating Heat and Reactive Solute Transport in Variably Saturated Porous Media.

Healy RW, Haile SS, Parkhurst DL, Charlton SR.

Ground Water. 2018 Sep;56(5):810-815. doi: 10.1111/gwat.12640. Epub 2018 Feb 20.


Multiple Score Comparison: a network meta-analysis approach to comparison and external validation of prognostic scores.

Haile SR, Guerra B, Soriano JB, Puhan MA; 3CIA collaboration.

BMC Med Res Methodol. 2017 Dec 21;17(1):172. doi: 10.1186/s12874-017-0433-2. Erratum in: BMC Med Res Methodol. 2018 Feb 12;18(1):21.


Abaloparatide, a novel PTH receptor agonist, increased bone mass and strength in ovariectomized cynomolgus monkeys by increasing bone formation without increasing bone resorption.

Doyle N, Varela A, Haile S, Guldberg R, Kostenuik PJ, Ominsky MS, Smith SY, Hattersley G.

Osteoporos Int. 2018 Mar;29(3):685-697. doi: 10.1007/s00198-017-4323-6. Epub 2017 Dec 19.


Prognostic value of MIB-1 proliferation index in solitary fibrous tumors of the pleura implemented in a new score - a multicenter study.

Diebold M, Soltermann A, Hottinger S, Haile SR, Bubendorf L, Komminoth P, Jochum W, Grobholz R, Theegarten D, Berezowska S, Darwiche K, Oezkan F, Kohler M, Franzen DP.

Respir Res. 2017 Dec 16;18(1):210. doi: 10.1186/s12931-017-0693-8.


Chemical surface exchange of oxygen on CeO2-δ in an O2/H2O atmosphere.

Ji HI, Xu X, Haile SM.

Phys Chem Chem Phys. 2017 Nov 8;19(43):29287-29293. doi: 10.1039/c7cp05969h.


Commonly Used Patient-Reported Outcomes Do Not Improve Prediction of COPD Exacerbations: A Multicenter 4½ Year Prospective Cohort Study.

Strassmann A, Frei A, Haile SR, Ter Riet G, Puhan MA.

Chest. 2017 Dec;152(6):1179-1187. doi: 10.1016/j.chest.2017.09.003. Epub 2017 Sep 18.


Long-term follow-up of pulmonary function in Fabry disease: A bi-center observational study.

Franzen DP, Nowak A, Haile SR, Mottet D, Bonani M, Dormond O, Kohler M, Krayenbuehl PA, Barbey F.

PLoS One. 2017 Jul 25;12(7):e0180437. doi: 10.1371/journal.pone.0180437. eCollection 2017.


Increasing quality, throughput and speed of sample preparation for strand-specific messenger RNA sequencing.

Haile S, Corbett RD, MacLeod T, Bilobram S, Smailus D, Tsao P, Kirk H, McDonald H, Pandoh P, Bala M, Hirst M, Miller D, Moore RA, Mungall AJ, Schein J, Coope RJ, Ma Y, Zhao Y, Holt RA, Jones SJ, Marra MA.

BMC Genomics. 2017 Jul 5;18(1):515. doi: 10.1186/s12864-017-3900-6.


Body height and mortality - mortality follow-up of four Swiss surveys.

Rohrmann S, Haile SR, Staub K, Bopp M, Faeh D; Swiss National Cohort Study Group.

Prev Med. 2017 Aug;101:67-71. doi: 10.1016/j.ypmed.2017.05.023. Epub 2017 Jun 1.


Automated high throughput nucleic acid purification from formalin-fixed paraffin-embedded tissue samples for next generation sequence analysis.

Haile S, Pandoh P, McDonald H, Corbett RD, Tsao P, Kirk H, MacLeod T, Jones M, Bilobram S, Brooks D, Smailus D, Steidl C, Scott DW, Bala M, Hirst M, Miller D, Moore RA, Mungall AJ, Coope RJ, Ma Y, Zhao Y, Holt RA, Jones SJ, Marra MA.

PLoS One. 2017 Jun 1;12(6):e0178706. doi: 10.1371/journal.pone.0178706. eCollection 2017.


Night-to-night variability of obstructive sleep apnea.

Stöberl AS, Schwarz EI, Haile SR, Turnbull CD, Rossi VA, Stradling JR, Kohler M.

J Sleep Res. 2017 Dec;26(6):782-788. doi: 10.1111/jsr.12558. Epub 2017 May 26.


Determinants of annual change in physical activity in COPD.

Clarenbach CF, Sievi NA, Haile SR, Brack T, Brutsche MH, Frey M, Irani S, Leuppi JD, Thurnheer R, Kohler M.

Respirology. 2017 Aug;22(6):1133-1139. doi: 10.1111/resp.13035. Epub 2017 Mar 30.


Residents' Learning Curve of Lumbar Transforaminal Epidural Steroid Injections.

Joswig H, Haile SR, Hildebrandt G, Stienen MN.

J Neurol Surg A Cent Eur Neurosurg. 2017 Sep;78(5):460-466. doi: 10.1055/s-0037-1599056. Epub 2017 Mar 24.


Gas-phase vs. material-kinetic limits on the redox response of nonstoichiometric oxides.

Ji HI, Davenport TC, Ignatowich MJ, Haile SM.

Phys Chem Chem Phys. 2017 Mar 8;19(10):7420-7430. doi: 10.1039/c7cp00449d.


The HemoCue WBC DIFF system could be used for leucocyte and neutrophil counts but not for full differential counts.

Karawajczyk M, Haile S, Grabski M, Larsson A.

Acta Paediatr. 2017 Jun;106(6):974-978. doi: 10.1111/apa.13790. Epub 2017 Mar 31.


Does addition of glucocorticoids to the initial therapy influence the later course of the disease in patients with early RA? Results from the Swiss prospective observational registry (SCQM).

Mueller RB, Reshiti N, Kaegi T, Finckh A, Haile SR, Schulze-Koops H, Schiff M, Spaeth M, von Kempis J; SCQM physicians.

Clin Rheumatol. 2017 Jan;36(1):59-66. doi: 10.1007/s10067-016-3468-6. Epub 2016 Nov 12.


Extreme high temperature redox kinetics in ceria: exploration of the transition from gas-phase to material-kinetic limitations.

Ji HI, Davenport TC, Gopal CB, Haile SM.

Phys Chem Chem Phys. 2016 Aug 3;18(31):21554-61. doi: 10.1039/c6cp01935h.


Follow-up practices for high-grade extremity Osteosarcoma.

Rothermundt C, Seddon BM, Dileo P, Strauss SJ, Coleman J, Briggs TW, Haile SR, Whelan JS.

BMC Cancer. 2016 May 6;16:301. doi: 10.1186/s12885-016-2333-y.


Targeting Androgen Receptor Activation Function-1 with EPI to Overcome Resistance Mechanisms in Castration-Resistant Prostate Cancer.

Yang YC, Banuelos CA, Mawji NR, Wang J, Kato M, Haile S, McEwan IJ, Plymate S, Sadar MD.

Clin Cancer Res. 2016 Sep 1;22(17):4466-77. doi: 10.1158/1078-0432.CCR-15-2901. Epub 2016 May 2.


Introducing Interlaminar Full-Endoscopic Lumbar Diskectomy: A Critical Analysis of Complications, Recurrence Rates, and Outcome in View of Two Spinal Surgeons' Learning Curves.

Joswig H, Richter H, Haile SR, Hildebrandt G, Fournier JY.

J Neurol Surg A Cent Eur Neurosurg. 2016 Sep;77(5):406-15. doi: 10.1055/s-0035-1570343. Epub 2016 Apr 11.


Erectile function following brachytherapy, external beam radiotherapy, or radical prostatectomy in prostate cancer patients.

Putora PM, Engeler D, Haile SR, Graf N, Buchauer K, Schmid HP, Plasswilm L.

Strahlenther Onkol. 2016 Mar;192(3):182-9. doi: 10.1007/s00066-015-0928-x. Epub 2015 Dec 28.


Structural, Mechanistic, and Antigenic Characterization of the Human Astrovirus Capsid.

York RL, Yousefi PA, Bogdanoff W, Haile S, Tripathi S, DuBois RM.

J Virol. 2015 Dec 9;90(5):2254-63. doi: 10.1128/JVI.02666-15.


Relationship of Serum Vitamin D Concentrations and Allostatic Load as a Measure of Cumulative Biological Risk among the US Population: A Cross-Sectional Study.

Frei R, Haile SR, Mutsch M, Rohrmann S.

PLoS One. 2015 Oct 9;10(10):e0139217. doi: 10.1371/journal.pone.0139217. eCollection 2015.


A basic model for training of microscopic and endoscopic transsphenoidal pituitary surgery: the Egghead.

Engel DC, Ferrari A, Tasman AJ, Schmid R, Schindel R, Haile SR, Mariani L, Fournier JY.

Acta Neurochir (Wien). 2015 Oct;157(10):1771-7; discussion 1777. doi: 10.1007/s00701-015-2544-z. Epub 2015 Aug 21.


Dynamic Nuclear Polarization NMR of Low-γ Nuclei: Structural Insights into Hydrated Yttrium-Doped BaZrO3.

Blanc F, Sperrin L, Lee D, Dervişoğlu R, Yamazaki Y, Haile SM, De Paëpe G, Grey CP.

J Phys Chem Lett. 2014 Jul 17;5(14):2431-6. doi: 10.1021/jz5007669. Epub 2014 Jun 30.


The novel β2-selective proteasome inhibitor LU-102 synergizes with bortezomib and carfilzomib to overcome proteasome inhibitor resistance of myeloma cells.

Kraus M, Bader J, Geurink PP, Weyburne ES, Mirabella AC, Silzle T, Shabaneh TB, van der Linden WA, de Bruin G, Haile SR, van Rooden E, Appenzeller C, Li N, Kisselev AF, Overkleeft H, Driessen C.

Haematologica. 2015 Oct;100(10):1350-60. doi: 10.3324/haematol.2014.109421. Epub 2015 Jun 11.


No benefit for regional control and survival by planned neck dissection in primary irradiated oropharyngeal cancer irrespective of p16 expression.

Maquieira R, Haerle SK, Huber GF, Soltermann A, Haile SR, Stoeckli SJ, Broglie MA.

Eur Arch Otorhinolaryngol. 2016 Jul;273(7):1841-8. doi: 10.1007/s00405-015-3675-9. Epub 2015 Jun 10.


Is intravesical stent position a predictor of associated morbidity?

Abt D, Mordasini L, Warzinek E, Schmid HP, Haile SR, Engeler DS, Müllhaupt G.

Korean J Urol. 2015 May;56(5):370-8. doi: 10.4111/kju.2015.56.5.370. Epub 2015 Apr 24.

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