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Items: 26

1.

Proteiniphilum saccharofermentans str. M3/6T isolated from a laboratory biogas reactor is versatile in polysaccharide and oligopeptide utilization as deduced from genome-based metabolic reconstructions.

Tomazetto G, Hahnke S, Wibberg D, Pühler A, Klocke M, Schlüter A.

Biotechnol Rep (Amst). 2018 Apr 30;18:e00254. doi: 10.1016/j.btre.2018.e00254. eCollection 2018 Jun.

2.

Complete Genome Sequence of a New Ruminococcaceae Bacterium Isolated from Anaerobic Biomass Hydrolysis.

Hahnke S, Abendroth C, Langer T, Codoñer FM, Ramm P, Porcar M, Luschnig O, Klocke M.

Genome Announc. 2018 Apr 5;6(14). pii: e00030-18. doi: 10.1128/genomeA.00030-18.

3.

Proteiniborus indolifex sp. nov., isolated from a thermophilic industrial-scale biogas plant.

Hahnke S, Langer T, Klocke M.

Int J Syst Evol Microbiol. 2018 Jan 25. doi: 10.1099/ijsem.0.002591. [Epub ahead of print]

PMID:
29458500
4.

Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes.

Maus I, Bremges A, Stolze Y, Hahnke S, Cibis KG, Koeck DE, Kim YS, Kreubel J, Hassa J, Wibberg D, Weimann A, Off S, Stantscheff R, Zverlov VV, Schwarz WH, König H, Liebl W, Scherer P, McHardy AC, Sczyrba A, Klocke M, Pühler A, Schlüter A.

Biotechnol Biofuels. 2017 Nov 13;10:264. doi: 10.1186/s13068-017-0947-1. eCollection 2017.

5.

Microbial communities involved in biogas production exhibit high resilience to heat shocks.

Abendroth C, Hahnke S, Simeonov C, Klocke M, Casani-Miravalls S, Ramm P, Bürger C, Luschnig O, Porcar M.

Bioresour Technol. 2018 Feb;249:1074-1079. doi: 10.1016/j.biortech.2017.10.093. Epub 2017 Oct 31.

PMID:
29146311
6.

Expanded and updated data and a query pipeline for iBeetle-Base.

Dönitz J, Gerischer L, Hahnke S, Pfeiffer S, Bucher G.

Nucleic Acids Res. 2018 Jan 4;46(D1):D831-D835. doi: 10.1093/nar/gkx984.

7.

Complete Genome Sequence of a New Firmicutes Species Isolated from Anaerobic Biomass Hydrolysis.

Abendroth C, Hahnke S, Codoñer FM, Klocke M, Luschnig O, Porcar M.

Genome Announc. 2017 Oct 5;5(40). pii: e00686-17. doi: 10.1128/genomeA.00686-17.

8.

The completely annotated genome and comparative genomics of the Peptoniphilaceae bacterium str. ING2-D1G, a novel acidogenic bacterium isolated from a mesophilic biogas reactor.

Tomazetto G, Hahnke S, Langer T, Wibberg D, Blom J, Maus I, Pühler A, Klocke M, Schlüter A.

J Biotechnol. 2017 Sep 10;257:178-186. doi: 10.1016/j.jbiotec.2017.05.027. Epub 2017 Jun 6.

PMID:
28595834
9.

Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates.

Maus I, Koeck DE, Cibis KG, Hahnke S, Kim YS, Langer T, Kreubel J, Erhard M, Bremges A, Off S, Stolze Y, Jaenicke S, Goesmann A, Sczyrba A, Scherer P, König H, Schwarz WH, Zverlov VV, Liebl W, Pühler A, Schlüter A, Klocke M.

Biotechnol Biofuels. 2016 Aug 11;9:171. doi: 10.1186/s13068-016-0581-3. eCollection 2016.

10.

Herbinix luporum sp. nov., a thermophilic cellulose-degrading bacterium isolated from a thermophilic biogas reactor.

Koeck DE, Hahnke S, Zverlov VV.

Int J Syst Evol Microbiol. 2016 Oct;66(10):4132-4137. doi: 10.1099/ijsem.0.001324. Epub 2016 Jul 21.

PMID:
27453473
13.

Complete genome analysis of Clostridium bornimense strain M2/40(T): A new acidogenic Clostridium species isolated from a mesophilic two-phase laboratory-scale biogas reactor.

Tomazetto G, Hahnke S, Koeck DE, Wibberg D, Maus I, Pühler A, Klocke M, Schlüter A.

J Biotechnol. 2016 Aug 20;232:38-49. doi: 10.1016/j.jbiotec.2015.08.001. Epub 2015 Aug 6.

PMID:
26256097
14.

Complete genome sequence of the novel Porphyromonadaceae bacterium strain ING2-E5B isolated from a mesophilic lab-scale biogas reactor.

Hahnke S, Maus I, Wibberg D, Tomazetto G, Pühler A, Klocke M, Schlüter A.

J Biotechnol. 2015 Jan 10;193:34-6. doi: 10.1016/j.jbiotec.2014.11.010. Epub 2014 Nov 20.

PMID:
25444871
15.

Complete genome sequence of Peptoniphilus sp. strain ING2-D1G isolated from a mesophilic lab-scale completely stirred tank reactor utilizing maize silage in co-digestion with pig and cattle manure for biomethanation.

Tomazetto G, Hahnke S, Maus I, Wibberg D, Pühler A, Schlüter A, Klocke M.

J Biotechnol. 2014 Dec 20;192 Pt A:59-61. doi: 10.1016/j.jbiotec.2014.09.011. Epub 2014 Sep 19.

PMID:
25242663
16.

Whole genome sequence of Clostridium bornimense strain M2/40 isolated from a lab-scale mesophilic two-phase biogas reactor digesting maize silage and wheat straw.

Hahnke S, Wibberg D, Tomazetto G, Pühler A, Klocke M, Schlüter A.

J Biotechnol. 2014 Aug 20;184:199-200. doi: 10.1016/j.jbiotec.2014.05.026. Epub 2014 Jun 4.

PMID:
24905146
17.

Clostridium bornimense sp. nov., isolated from a mesophilic, two-phase, laboratory-scale biogas reactor.

Hahnke S, Striesow J, Elvert M, Mollar XP, Klocke M.

Int J Syst Evol Microbiol. 2014 Aug;64(Pt 8):2792-7. doi: 10.1099/ijs.0.059691-0. Epub 2014 May 23.

PMID:
24860110
18.

An improved medium for the anaerobic growth of Paracoccus denitrificans Pd1222.

Hahnke SM, Moosmann P, Erb TJ, Strous M.

Front Microbiol. 2014 Jan 31;5:18. doi: 10.3389/fmicb.2014.00018. eCollection 2014.

19.

Carbon source--a strong determinant of microbial community structure and performance of an anaerobic reactor.

Kundu K, Bergmann I, Hahnke S, Klocke M, Sharma S, Sreekrishnan TR.

J Biotechnol. 2013 Dec;168(4):616-24. doi: 10.1016/j.jbiotec.2013.08.023. Epub 2013 Aug 27.

PMID:
23994689
20.

Distinct seasonal growth patterns of the bacterium Planktotalea frisia in the North Sea and specific interaction with phytoplankton algae.

Hahnke S, Sperling M, Langer T, Wichels A, Gerdts G, Beardsley C, Brinkhoff T, Simon M.

FEMS Microbiol Ecol. 2013 Nov;86(2):185-99. doi: 10.1111/1574-6941.12151. Epub 2013 Jun 19.

21.

Physiological diversity of Roseobacter clade bacteria co-occurring during a phytoplankton bloom in the North Sea.

Hahnke S, Brock NL, Zell C, Simon M, Dickschat JS, Brinkhoff T.

Syst Appl Microbiol. 2013 Feb;36(1):39-48. doi: 10.1016/j.syapm.2012.09.004. Epub 2012 Dec 21.

PMID:
23265193
22.

Roseobacter clade bacteria are abundant in coastal sediments and encode a novel combination of sulfur oxidation genes.

Lenk S, Moraru C, Hahnke S, Arnds J, Richter M, Kube M, Reinhardt R, Brinkhoff T, Harder J, Amann R, Mußmann M.

ISME J. 2012 Dec;6(12):2178-87. doi: 10.1038/ismej.2012.66. Epub 2012 Jun 28.

23.

Pelagimonas varians gen. nov., sp. nov., isolated from the southern North Sea.

Hahnke S, Tindall BJ, Schumann P, Simon M, Brinkhoff T.

Int J Syst Evol Microbiol. 2013 Mar;63(Pt 3):835-43. doi: 10.1099/ijs.0.040675-0. Epub 2012 May 18.

PMID:
22611199
24.

Planktotalea frisia gen. nov., sp. nov., isolated from the southern North Sea.

Hahnke S, Tindall BJ, Schumann P, Sperling M, Brinkhoff T, Simon M.

Int J Syst Evol Microbiol. 2012 Jul;62(Pt 7):1619-24. doi: 10.1099/ijs.0.033563-0. Epub 2011 Sep 2.

PMID:
21890723
25.

Influence of light and anoxia on chemiosmotic energy conservation in Dinoroseobacter shibae.

Holert J, Hahnke S, Cypionka H.

Environ Microbiol Rep. 2011 Feb;3(1):136-141.

26.

The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea.

Wagner-Döbler I, Ballhausen B, Berger M, Brinkhoff T, Buchholz I, Bunk B, Cypionka H, Daniel R, Drepper T, Gerdts G, Hahnke S, Han C, Jahn D, Kalhoefer D, Kiss H, Klenk HP, Kyrpides N, Liebl W, Liesegang H, Meincke L, Pati A, Petersen J, Piekarski T, Pommerenke C, Pradella S, Pukall R, Rabus R, Stackebrandt E, Thole S, Thompson L, Tielen P, Tomasch J, von Jan M, Wanphrut N, Wichels A, Zech H, Simon M.

ISME J. 2010 Jan;4(1):61-77. doi: 10.1038/ismej.2009.94. Epub 2009 Sep 10.

PMID:
19741735

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