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Items: 26

1.

Imaging Membrane Curvature inside a FcεRI-Centric Synapse in RBL-2H3 Cells Using TIRF Microscopy with Polarized Excitation.

Machado R, Bendesky J, Brown M, Spendier K, Hagen GM.

J Imaging. 2019 Jul;5(7). pii: 63. doi: 10.3390/jimaging5070063. Epub 2019 Jul 4.

2.

Publisher Correction: Super-resolution fight club: assessment of 2D and 3D single-molecule localization microscopy software.

Sage D, Pham TA, Babcock H, Lukes T, Pengo T, Chao J, Velmurugan R, Herbert A, Agrawal A, Colabrese S, Wheeler A, Archetti A, Rieger B, Ober R, Hagen GM, Sibarita JB, Ries J, Henriques R, Unser M, Holden S.

Nat Methods. 2019 Jun;16(6):561. doi: 10.1038/s41592-019-0453-4.

PMID:
31097821
3.

Super-resolution fight club: assessment of 2D and 3D single-molecule localization microscopy software.

Sage D, Pham TA, Babcock H, Lukes T, Pengo T, Chao J, Velmurugan R, Herbert A, Agrawal A, Colabrese S, Wheeler A, Archetti A, Rieger B, Ober R, Hagen GM, Sibarita JB, Ries J, Henriques R, Unser M, Holden S.

Nat Methods. 2019 May;16(5):387-395. doi: 10.1038/s41592-019-0364-4. Epub 2019 Apr 8. Erratum in: Nat Methods. 2019 Jun;16(6):561.

4.

Imaging tissues and cells beyond the diffraction limit with structured illumination microscopy and Bayesian image reconstruction.

Pospíšil J, Lukeš T, Bendesky J, Fliegel K, Spendier K, Hagen GM.

Gigascience. 2019 Jan 1;8(1). doi: 10.1093/gigascience/giy126.

5.

Quantitative super-resolution single molecule microscopy dataset of YFP-tagged growth factor receptors.

Lukeš T, Pospíšil J, Fliegel K, Lasser T, Hagen GM.

Gigascience. 2018 Mar 1;7(3):1-10. doi: 10.1093/gigascience/giy002.

6.

Giardia intestinalis mitosomes undergo synchronized fission but not fusion and are constitutively associated with the endoplasmic reticulum.

Voleman L, Najdrová V, Ástvaldsson Á, Tůmová P, Einarsson E, Švindrych Z, Hagen GM, Tachezy J, Svärd SG, Doležal P.

BMC Biol. 2017 Apr 3;15(1):27. doi: 10.1186/s12915-017-0361-y.

7.

SIMToolbox: a MATLAB toolbox for structured illumination fluorescence microscopy.

Křížek P, Lukeš T, Ovesný M, Fliegel K, Hagen GM.

Bioinformatics. 2016 Jan 15;32(2):318-20. doi: 10.1093/bioinformatics/btv576. Epub 2015 Oct 6.

PMID:
26446133
8.

High density 3D localization microscopy using sparse support recovery.

Ovesný M, Křížek P, Švindrych Z, Hagen GM.

Opt Express. 2014 Dec 15;22(25):31263-76. doi: 10.1364/OE.22.031263.

PMID:
25607074
9.

Three-dimensional super-resolution structured illumination microscopy with maximum a posteriori probability image estimation.

Lukeš T, Křížek P, Švindrych Z, Benda J, Ovesný M, Fliegel K, Klíma M, Hagen GM.

Opt Express. 2014 Dec 1;22(24):29805-17. doi: 10.1364/OE.22.029805.

PMID:
25606910
10.

Separation of replication and transcription domains in nucleoli.

Smirnov E, Borkovec J, Kováčik L, Svidenská S, Schröfel A, Skalníková M, Švindrych Z, Křížek P, Ovesný M, Hagen GM, Juda P, Michalová K, Cardoso MC, Cmarko D, Raška I.

J Struct Biol. 2014 Dec;188(3):259-66. doi: 10.1016/j.jsb.2014.10.001. Epub 2014 Oct 17.

PMID:
25450594
11.

ThunderSTORM: a comprehensive ImageJ plug-in for PALM and STORM data analysis and super-resolution imaging.

Ovesný M, Křížek P, Borkovec J, Svindrych Z, Hagen GM.

Bioinformatics. 2014 Aug 15;30(16):2389-90. doi: 10.1093/bioinformatics/btu202. Epub 2014 Apr 25.

12.

A benchmark for comparison of cell tracking algorithms.

Maška M, Ulman V, Svoboda D, Matula P, Matula P, Ederra C, Urbiola A, España T, Venkatesan S, Balak DM, Karas P, Bolcková T, Streitová M, Carthel C, Coraluppi S, Harder N, Rohr K, Magnusson KE, Jaldén J, Blau HM, Dzyubachyk O, Křížek P, Hagen GM, Pastor-Escuredo D, Jimenez-Carretero D, Ledesma-Carbayo MJ, Muñoz-Barrutia A, Meijering E, Kozubek M, Ortiz-de-Solorzano C.

Bioinformatics. 2014 Jun 1;30(11):1609-17. doi: 10.1093/bioinformatics/btu080. Epub 2014 Feb 12.

13.

Flexible structured illumination microscope with a programmable illumination array.

Křížek P, Raška I, Hagen GM.

Opt Express. 2012 Oct 22;20(22):24585-99. doi: 10.1364/OE.20.024585.

PMID:
23187221
14.

Minimizing detection errors in single molecule localization microscopy.

Křížek P, Raška I, Hagen GM.

Opt Express. 2011 Feb 14;19(4):3226-35. doi: 10.1364/OE.19.003226.

PMID:
21369145
15.

Replication timing of pseudo-NORs.

Smirnov E, Cmarko D, Kováčik L, Hagen GM, Popov A, Raska O, Prieto JL, Ryabchenko B, Amim F, McStay B, Raska I.

J Struct Biol. 2011 Feb;173(2):213-8. doi: 10.1016/j.jsb.2010.11.023. Epub 2010 Dec 3.

PMID:
21130882
16.

Specific visualization of glioma cells in living low-grade tumor tissue.

Kantelhardt SR, Caarls W, de Vries AH, Hagen GM, Jovin TM, Schulz-Schaeffer W, Rohde V, Giese A, Arndt-Jovin DJ.

PLoS One. 2010 Jun 30;5(6):e11323. doi: 10.1371/journal.pone.0011323.

17.

Fluorescence recovery after photobleaching and photoconversion in multiple arbitrary regions of interest using a programmable array microscope.

Hagen GM, Caarls W, Lidke KA, De Vries AH, Fritsch C, Barisas BG, Arndt-Jovin DJ, Jovin TM.

Microsc Res Tech. 2009 Jun;72(6):431-40. doi: 10.1002/jemt.20686.

18.

Constitutively-active human LH receptors are self-associated and located in rafts.

Lei Y, Hagen GM, Smith SM, Liu J, Barisas G, Roess DA.

Mol Cell Endocrinol. 2007 Jan 2;260-262:65-72. Epub 2006 Oct 11.

19.

Fluorescence photobleaching recovery using total internal reflection interference fringes.

Hagen GM, Roess DA, Barisas BG.

Anal Biochem. 2006 Sep 1;356(1):30-5. Epub 2006 Jul 12.

PMID:
16875658
20.

Compartmentalization of the Type I Fc epsilon receptor and MAFA on mast cell membranes.

Barisas BG, Smith SM, Liu J, Song J, Hagen GM, Pecht I, Roess DA.

Biophys Chem. 2007 Mar;126(1-3):209-17. Epub 2006 Jun 21.

PMID:
16797115
21.

Luteinizing hormone receptors translocate to plasma membrane microdomains after binding of human chorionic gonadotropin.

Smith SM, Lei Y, Liu J, Cahill ME, Hagen GM, Barisas BG, Roess DA.

Endocrinology. 2006 Apr;147(4):1789-95. Epub 2006 Jan 12.

PMID:
16410308
22.

High probe intensity photobleaching measurement of lateral diffusion in cell membranes.

Hagen GM, Roess DA, de León GC, Barisas BG.

J Fluoresc. 2005 Nov;15(6):873-82.

PMID:
16315103
23.

Chimeric GnRH-LH receptors and LH receptors lacking C-terminus palmitoylation sites do not localize to plasma membrane rafts.

Lei Y, Hagen GM, Smith SM, Barisas BG, Roess DA.

Biochem Biophys Res Commun. 2005 Nov 18;337(2):430-4. Epub 2005 Sep 21.

PMID:
16202972
24.

The mast cell function-associated antigen and its interactions with the type I Fcepsilon receptor.

Song J, Hagen GM, Roess DA, Pecht I, Barisas BG.

Biochemistry. 2002 Jan 22;41(3):881-9.

PMID:
11790110
25.

Molecular dynamics of point mutated I-A(k) molecules expressed on lymphocytes.

Munnelly HM, Brady CJ, Hagen GM, Horvat RD, Wade WF, Roess DA, Barisas BG.

Immunol Lett. 2001 Jul 2;77(3):187-96.

PMID:
11410253
26.

Rotational and lateral dynamics of I-A(k) molecules expressing cytoplasmic truncations.

Munnelly HM, Brady CJ, Hagen GM, Wade WF, Roess DA, Barisas BG.

Int Immunol. 2000 Sep;12(9):1319-28.

PMID:
10967027

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