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Items: 1 to 50 of 292

1.

Antifungal susceptibility, genotyping, resistance mechanism, and clinical profile of Candida tropicalis blood isolates.

Arastehfar A, Daneshnia F, Hafez A, Khodavaisy S, Najafzadeh MJ, Charsizadeh A, Zarrinfar H, Salehi M, Shahrabadi ZZ, Sasani E, Zomorodian K, Pan W, Hagen F, Ilkit M, Kostrzewa M, Boekhout T.

Med Mycol. 2019 Dec 12. pii: myz124. doi: 10.1093/mmy/myz124. [Epub ahead of print]

PMID:
31828316
2.

Genotypic diversity in clinical and environmental isolates of Cryptococcus neoformans from India using multilocus microsatellite and multilocus sequence typing.

Prakash A, Sundar G, Sharma B, Hagen F, Meis JF, Chowdhary A.

Mycoses. 2019 Dec 9. doi: 10.1111/myc.13041. [Epub ahead of print]

PMID:
31820495
3.

The Fungal PCR Initiative's evaluation of in-house and commercial Pneumocystis jirovecii qPCR assays: Toward a standard for a diagnostics assay.

Gits-Muselli M, White PL, Mengoli C, Chen S, Crowley B, Dingemans G, Fréalle E, L Gorton R, Guiver M, Hagen F, Halliday C, Johnson G, Lagrou K, Lengerova M, Melchers WJG, Novak-Frazer L, Rautemaa-Richardson R, Scherer E, Steinmann J, Cruciani M, Barnes R, Donnelly JP, Loeffler J, Bretagne S, Alanio A.

Med Mycol. 2019 Nov 23. pii: myz115. doi: 10.1093/mmy/myz115. [Epub ahead of print]

PMID:
31758173
4.

The High-Quality Complete Genome Sequence of the Opportunistic Fungal Pathogen Candida vulturna CBS 14366T.

Navarro-Muñoz JC, de Jong AW, Gerrits van den Ende B, Haas PJ, Then ER, Mohd Tap R, Collemare J, Hagen F.

Mycopathologia. 2019 Dec;184(6):731-734. doi: 10.1007/s11046-019-00404-0. Epub 2019 Nov 16.

PMID:
31734799
5.

Corrigendum: Molecular characterization and antifungal susceptibility testing of Candida nivariensis from blood samples - an Iranian multicentre study and a review of the literature.

Arastehfar A, Daneshnia F, Salehi MR, Zarrinfar H, Khodavaisy S, Haas PJ, Roudbary M, Najafzadeh MJ, Zomorodian K, Charsizadeh A, Brouwer C, Pan W, Hagen F, Boekhout T.

J Med Microbiol. 2019 Nov;68(11):1695. doi: 10.1099/jmm.0.001075. No abstract available.

PMID:
31685093
6.

The mitochondrial intergenic regions nad1-cob and cob-rps3 as molecular identification tools for pathogenic members of the genus Cryptococcus.

Kortsinoglou AM, Korovesi AG, Theelen B, Hagen F, Boekhout T, Kouvelis VN.

FEMS Yeast Res. 2019 Dec 1;19(8). pii: foz077. doi: 10.1093/femsyr/foz077.

PMID:
31665278
7.

Case report: chronic relapsing cryptococcal meningitis in a patient with low mannose-binding lectin and a low naïve CD4 cell count.

Wagemakers A, Ang CW, Hagen F, Bot JCJ, Bomers MK, Visser MC, van Dijk K.

BMC Infect Dis. 2019 Oct 15;19(1):846. doi: 10.1186/s12879-019-4515-0.

8.

Clinical insights and epidemiology of central nervous system infection due to Cryptococcus neoformans/gattii species complexes: A prospective study from South India.

Lahiri S, Manjunath N, Bhat M, Hagen F, Bahubali VH, Palaniappan M, Maji S, Chandrashekar N.

Med Mycol. 2019 Oct 3. pii: myz097. doi: 10.1093/mmy/myz097. [Epub ahead of print]

PMID:
31578566
9.

cyp51A Mutations, Extrolite Profiles, and Antifungal Susceptibility in Clinical and Environmental Isolates of the Aspergillus viridinutans Species Complex.

Talbot JJ, Frisvad JC, Meis JF, Hagen F, Verweij PE, Hibbs DE, Lai F, Groundwater PW, Samson RA, Kidd SE, Barrs VR, Houbraken J.

Antimicrob Agents Chemother. 2019 Oct 22;63(11). pii: e00632-19. doi: 10.1128/AAC.00632-19. Print 2019 Nov.

10.

Molecular Identification, Genotypic Diversity, Antifungal Susceptibility, and Clinical Outcomes of Infections Caused by Clinically Underrated Yeasts, Candida orthopsilosis, and Candida metapsilosis: An Iranian Multicenter Study (2014-2019).

Arastehfar A, Khodavaisy S, Daneshnia F, Najafzadeh MJ, Mahmoudi S, Charsizadeh A, Salehi MR, Zarrinfar H, Raeisabadi A, Dolatabadi S, Zare Shahrabadi Z, Zomorodian K, Pan W, Hagen F, Boekhout T.

Front Cell Infect Microbiol. 2019 Jul 30;9:264. doi: 10.3389/fcimb.2019.00264. eCollection 2019.

11.

Species borderlines in Fusarium exemplified by F. circinatum/F. subglutinans.

Zhao L, de Hoog S, Hagen F, Kang Y, Al-Hatmi AMS.

Fungal Genet Biol. 2019 Nov;132:103262. doi: 10.1016/j.fgb.2019.103262. Epub 2019 Aug 12.

PMID:
31415905
12.

Polyphasic Discrimination of Trichophyton tonsurans and T. equinum from Humans and Horses.

Kandemir H, Dukik K, Hagen F, Ilkit M, Gräser Y, de Hoog GS.

Mycopathologia. 2019 Jul 5. doi: 10.1007/s11046-019-00344-9. [Epub ahead of print]

PMID:
31278475
13.

Successful Allogenic Stem Cell Transplantation in Patients with Inherited CARD9 Deficiency.

Queiroz-Telles F, Mercier T, Maertens J, Sola CBS, Bonfim C, Lortholary O, Constantino-Silva RMN, Schrijvers R, Hagen F, Meis JF, Herkert PF, Breda GL, França JB, Filho NAR, Lanternier F, Casanova JL, Puel A, Grumach AS.

J Clin Immunol. 2019 Jul;39(5):462-469. doi: 10.1007/s10875-019-00662-z. Epub 2019 Jun 20.

PMID:
31222666
14.

Macrolide-Resistant Mycoplasma genitalium in Southeastern Region of the Netherlands, 2014-2017.

Martens L, Kuster S, de Vos W, Kersten M, Berkhout H, Hagen F.

Emerg Infect Dis. 2019 Jul;25(7):1297-1303. doi: 10.3201/eid2507.181556.

15.

Attack, Defend and Persist: How the Fungal Pathogen Candida auris was Able to Emerge Globally in Healthcare Environments.

de Jong AW, Hagen F.

Mycopathologia. 2019 Jun;184(3):353-365. doi: 10.1007/s11046-019-00351-w. Epub 2019 Jun 17. Review.

PMID:
31209693
16.

Corrigendum: Comparison of 21-Plex PCR and API 20C AUX, MALDI-TOF MS, and rDNA Sequencing for a Wide Range of Clinically Isolated Yeast Species: Improved Identification by Combining 21-Plex PCR and API 20C AUX as an Alternative Strategy for Developing Countries.

Arastehfar A, Daneshnia F, Kord M, Roudbary M, Zarrinfar H, Fang W, Hashemi SJ, Najafzadeh MJ, Khodavaisy S, Pan W, Liao W, Badali H, Rezaie S, Zomorodian K, Hagen F, Boekhout T.

Front Cell Infect Microbiol. 2019 May 28;9:176. doi: 10.3389/fcimb.2019.00176. eCollection 2019.

17.

Species Distinction in the Trichophyton rubrum Complex.

Su H, Packeu A, Ahmed SA, Al-Hatmi AMS, Blechert O, İlkit M, Hagen F, Gräser Y, Liu W, Deng S, Hendrickx M, Xu J, Zhu M, de Hoog S.

J Clin Microbiol. 2019 Aug 26;57(9). pii: e00352-19. doi: 10.1128/JCM.00352-19. Print 2019 Sep.

18.

Nonrandom Distribution of Azole Resistance across the Global Population of Aspergillus fumigatus.

Sewell TR, Zhu J, Rhodes J, Hagen F, Meis JF, Fisher MC, Jombart T.

mBio. 2019 May 21;10(3). pii: e00392-19. doi: 10.1128/mBio.00392-19.

19.

Incidence and spectrum of yeast species isolated from the oral cavity of Iranian patients suffering from hematological malignancies.

Arastehfar A, Daneshnia F, Farahyar S, Fang W, Salimi M, Salehi M, Hagen F, Weihua P, Roudbary M, Boekhout T.

J Oral Microbiol. 2019 Apr 12;11(1):1601061. doi: 10.1080/20002297.2019.1601061. eCollection 2019.

20.

One year prospective survey of azole resistance in Aspergillus fumigatus at a French cystic fibrosis reference centre: prevalence and mechanisms of resistance.

Lavergne RA, Morio F, Danner-Boucher I, Horeau-Langlard D, David V, Hagen F, Meis JF, Le Pape P.

J Antimicrob Chemother. 2019 Jul 1;74(7):1884-1889. doi: 10.1093/jac/dkz144.

PMID:
31038164
21.

Genotypes and population genetics of cryptococcus neoformans and cryptococcus gattii species complexes in Europe and the mediterranean area.

Cogliati M, Desnos-Ollivier M, McCormick-Smith I, Rickerts V, Ferreira-Paim K, Meyer W, Boekhout T, Hagen F, Theelen B, Inácio J, Alonso B, Colom MF, Trilles L, Montagna MT, De Donno A, Susever S, Ergin C, Velegraki A, Ellabib MS, Nardoni S, Macci C, Trovato L, Dipineto L, Akcaglar S, Mlinaric-Missoni E, Bertout S, Vencá ACF, Sampaio AC, Criseo G, Ranque S, Çerikçioğlu N, Marchese A, Vezzulli L, Ilkit M, Pasquale V, Polacheck I, Lockhart SR.

Fungal Genet Biol. 2019 Aug;129:16-29. doi: 10.1016/j.fgb.2019.04.001. Epub 2019 Apr 3.

PMID:
30953839
22.

Low Level of Antifungal Resistance in Iranian Isolates of Candida glabrata Recovered from Blood Samples in a Multicenter Study from 2015 to 2018 and Potential Prognostic Values of Genotyping and Sequencing of PDR1.

Arastehfar A, Daneshnia F, Zomorodian K, Najafzadeh MJ, Khodavaisy S, Zarrinfar H, Hagen F, Zare Shahrabadi Z, Lackner M, Mirhendi H, Salehi M, Roudbary M, Pan W, Kostrzewa M, Boekhout T.

Antimicrob Agents Chemother. 2019 Jun 24;63(7). pii: e02503-18. doi: 10.1128/AAC.02503-18. Print 2019 Jul.

23.

Molecular characterization and antifungal susceptibility testing of Candida nivariensis from blood samples - an Iranian multicentre study and a review of the literature.

Arastehfar A, Daneshnia F, Salehi MR, Zarrinfar H, Khodavaisy S, Haas PJ, Roudbary M, Najafzadeh MJ, Zomorodian K, Charsizadeh A, Brouwer C, Pan W, Hagen F, Boekhout T.

J Med Microbiol. 2019 May;68(5):770-777. doi: 10.1099/jmm.0.000963. Epub 2019 Mar 29. Review. Erratum in: J Med Microbiol. 2019 Nov;68(11):1695.

PMID:
30924763
24.

Fungicide-driven alterations in azole-resistant Aspergillus fumigatus are related to vegetable crops in Colombia, South America.

Alvarez-Moreno C, Lavergne RA, Hagen F, Morio F, Meis JF, Le Pape P.

Mycologia. 2019 Mar-Apr;111(2):217-224. doi: 10.1080/00275514.2018.1557796. Epub 2019 Mar 21.

PMID:
30896313
25.

First fungemia case due to environmental yeast Wickerhamomyces myanmarensis: detection by multiplex qPCR and antifungal susceptibility.

Arastehfar A, Bakhtiari M, Daneshnia F, Fang W, Sadati SK, Al-Hatmi AM, Groenewald M, Sharifi-Mehr H, Liao W, Pan W, Zomorodian K, Hagen F, Boekhout T.

Future Microbiol. 2019 Mar;14:267-274. doi: 10.2217/fmb-2018-0253. Epub 2019 Mar 12.

26.

Corrigendum: Unequivocal identification of an underestimated opportunistic yeast species, Cyberlindnera fabianii, and its close relatives using a dual-function PCR and literature review of published cases.

Arastehfar A, Fang W, Al-Hatmi AMS, Afsarian MH, Daneshnia F, Bakhtiari M, Sadati SK, Badali H, Khodavaisy S, Hagen F, Liao W, Pan W, Zomorodian K, Boekhout T.

Med Mycol. 2019 Nov 1;57(8):e12. doi: 10.1093/mmy/myz025. No abstract available.

27.

Comparison of 21-Plex PCR and API 20C AUX, MALDI-TOF MS, and rDNA Sequencing for a Wide Range of Clinically Isolated Yeast Species: Improved Identification by Combining 21-Plex PCR and API 20C AUX as an Alternative Strategy for Developing Countries.

Arastehfar A, Daneshnia F, Kord M, Roudbary M, Zarrinfar H, Fang W, Hashemi SJ, Najafzadeh MJ, Khodavaisy S, Pan W, Liao W, Badali H, Rezaie S, Zomorodian K, Hagen F, Boekhout T.

Front Cell Infect Microbiol. 2019 Feb 15;9:21. doi: 10.3389/fcimb.2019.00021. eCollection 2019. Erratum in: Front Cell Infect Microbiol. 2019 May 28;9:176.

28.

Endovascular Treatment of Unruptured MCA Bifurcation Aneurysms Regardless of Aneurysm Morphology: Short- and Long-Term Follow-Up.

Hagen F, Maurer CJ, Berlis A.

AJNR Am J Neuroradiol. 2019 Mar;40(3):503-509. doi: 10.3174/ajnr.A5977. Epub 2019 Feb 14.

PMID:
30765382
29.

A novel diagnosis scoring model to predict invasive pulmonary aspergillosis in the intensive care unit.

Rozaliyani A, Sedono R, Jusuf A, Rumende CM, Aniwidyaningsih W, Burhan E, Prasenohadi P, Handayani D, Yunihastuti E, Siagian FE, Jayusman AM, Rusli A, Sungkar S, Prihartono J, Hagen F, Meis JF, Wahyuningsih R.

Saudi Med J. 2019 Feb;40(2):140-146. doi: 10.15537/smj.2019.2.22940.

30.

High-resolution fingerprinting of Candida parapsilosis isolates suggests persistence and transmission of infections among neonatal intensive care unit patients in Kuwait.

Asadzadeh M, Ahmad S, Al-Sweih N, Hagen F, Meis JF, Khan Z.

Sci Rep. 2019 Feb 4;9(1):1340. doi: 10.1038/s41598-018-37855-2.

31.

Unequivocal identification of an underestimated opportunistic yeast species, Cyberlindnera fabianii, and its close relatives using a dual-function PCR and literature review of published cases.

Arastehfar A, Fang W, Al-Hatmi AMS, Afsarian MH, Daneshnia F, Bakhtiari M, Sadati SK, Badali H, Khodavaisy S, Hagen F, Liao W, Pan W, Zomorodian K, Boekhout T.

Med Mycol. 2019 Oct 1;57(7):833-840. doi: 10.1093/mmy/myy148. Erratum in: Med Mycol. 2019 Nov 1;57(8):e12.

32.

Molecular epidemiology and in vitro antifungal susceptibility of Trichophyton schoenleinii, agent of tinea capitis favosa.

Gao Y, Zhan P, Hagen F, Menken SBJ, Sun J, Rezaei-Matehkolaei A, de Hoog S.

Mycoses. 2019 May;62(5):466-474. doi: 10.1111/myc.12889.

PMID:
30597639
33.

Novel multiplex real-time quantitative PCR detecting system approach for direct detection of Candida auris and its relatives in spiked serum samples.

Arastehfar A, Fang W, Daneshnia F, Al-Hatmi AM, Liao W, Pan W, Khan Z, Ahmad S, Rosam K, Lackner M, Lass-Flörl C, Hagen F, Boekhout T.

Future Microbiol. 2019 Jan;14:33-45. doi: 10.2217/fmb-2018-0227. Epub 2018 Dec 12.

34.

Eighty Years of Mycopathologia: A Retrospective Analysis of Progress Made in Understanding Human and Animal Fungal Pathogens.

Chaturvedi V, Bouchara JP, Hagen F, Alastruey-Izquierdo A, Badali H, Bocca AL, Cano-Lira JF, Cao C, Chaturvedi S, Chotirmall SH, van Diepeningen AD, Gangneux JP, Guinea J, de Hoog S, Ilkit M, Kano R, Liu W, Martinez-Rossi NM, de Souza Carvalho Melhem M, Ono MA, Ran Y, Ranque S, de Almeida Soares CM, Sugita T, Thomas PA, Vecchiarelli A, Wengenack NL, Woo PCY, Xu J, Zancope-Oliveira RM.

Mycopathologia. 2018 Dec;183(6):859-877. doi: 10.1007/s11046-018-0306-1. Epub 2018 Nov 30.

PMID:
30506286
35.

Prevalence and diversity of filamentous fungi in the airways of cystic fibrosis patients - A Dutch, multicentre study.

Engel TGP, Slabbers L, de Jong C, Melchers WJG, Hagen F, Verweij PE, Merkus P, Meis JF; Dutch Cystic Fibrosis Fungal Collection Consortium.

J Cyst Fibros. 2019 Mar;18(2):221-226. doi: 10.1016/j.jcf.2018.11.012. Epub 2018 Dec 1.

PMID:
30514613
36.

Case report: A fatal case of cryptococcosis in an immunocompetent patient due to Cryptococcus deuterogattii (AFLP6/VGII).

Bauer M, Wickenhauser C, Haak A, Pazaitis N, Siebolts U, Mawrin C, Strauss C, Rickerts V, Stoevesandt D, Cornely OA, Meis JF, Hagen F.

JMM Case Rep. 2018 Oct 23;5(10):e005168. doi: 10.1099/jmmcr.0.005168. eCollection 2018 Oct.

37.

Invasive Infections Due to Trichosporon: Species Distribution, Genotyping, and Antifungal Susceptibilities from a Multicenter Study in China.

Guo LN, Yu SY, Hsueh PR, Al-Hatmi AMS, Meis JF, Hagen F, Xiao M, Wang H, Barresi C, Zhou ML, de Hoog GS, Xu YC.

J Clin Microbiol. 2019 Jan 30;57(2). pii: e01505-18. doi: 10.1128/JCM.01505-18. Print 2019 Feb.

38.

Genotyping of Aspergillus fumigatus in Formalin-Fixed Paraffin-Embedded Tissues and Serum Samples From Patients With Invasive Aspergillosis.

de Groot T, Hagen F, Vreuls W, Verweij PE, Chowdhary A, Meis JF.

Front Cell Infect Microbiol. 2018 Oct 23;8:377. doi: 10.3389/fcimb.2018.00377. eCollection 2018.

39.

YEAST PANEL multiplex PCR for identification of clinically important yeast species: stepwise diagnostic strategy, useful for developing countries.

Arastehfar A, Fang W, Pan W, Lackner M, Liao W, Badiee P, Zomorodian K, Badali H, Hagen F, Lass-Flörl C, Boekhout T.

Diagn Microbiol Infect Dis. 2019 Feb;93(2):112-119. doi: 10.1016/j.diagmicrobio.2018.09.007. Epub 2018 Sep 21.

40.

Genotypic diversity and antifungal susceptibility of Cryptococcus neoformans isolates from paediatric patients in China.

Hong N, Chen M, Xu N, Al-Hatmi AMS, Zhang C, Pan WH, Hagen F, Boekhout T, Xu J, Zou XB, Liao WQ.

Mycoses. 2019 Feb;62(2):171-180. doi: 10.1111/myc.12863. Epub 2018 Nov 13.

PMID:
30341799
41.

Molecular epidemiology of environmental Cryptococcus species isolates based on amplified fragment length polymorphism.

Pakshir K, Fakhim H, Vaezi A, Meis JF, Mahmoodi M, Zomorodian K, Javidnia J, Ansari S, Hagen F, Badali H.

J Mycol Med. 2018 Dec;28(4):599-605. doi: 10.1016/j.mycmed.2018.09.005. Epub 2018 Oct 12.

PMID:
30322827
42.

Comparative genotyping and phenotyping of Aspergillus fumigatus isolates from humans, dogs and the environment.

Valdes ID, van den Berg J, Haagsman A, Escobar N, Meis JF, Hagen F, Haas PJ, Houbraken J, Wösten HAB, de Cock H.

BMC Microbiol. 2018 Sep 17;18(1):118. doi: 10.1186/s12866-018-1244-2.

43.

Itraconazole, Voriconazole, and Posaconazole CLSI MIC Distributions for Wild-Type and Azole-Resistant Aspergillus fumigatus Isolates.

Buil JB, Hagen F, Chowdhary A, Verweij PE, Meis JF.

J Fungi (Basel). 2018 Aug 29;4(3). pii: E103. doi: 10.3390/jof4030103.

44.

Global guidelines and initiatives from the European Confederation of Medical Mycology to improve patient care and research worldwide: New leadership is about working together.

Hoenigl M, Gangneux JP, Segal E, Alanio A, Chakrabarti A, Chen SC, Govender N, Hagen F, Klimko N, Meis JF, Pasqualotto AC, Seidel D, Walsh TJ, Lagrou K, Lass-Flörl C, Cornely OA; European Confederation of Medical Mycology (ECMM).

Mycoses. 2018 Nov;61(11):885-894. doi: 10.1111/myc.12836. Epub 2018 Aug 28.

PMID:
30086186
45.

Epidemiology and aetiologies of cryptococcal meningitis in Africa, 1950-2017: protocol for a systematic review.

Nyazika TK, Tatuene JK, Kenfak-Foguena A, Verweij PE, Meis JF, Robertson VJ, Hagen F.

BMJ Open. 2018 Jul 30;8(7):e020654. doi: 10.1136/bmjopen-2017-020654.

46.

Internal validation of GPS MONODOSE CanAur dtec-qPCR kit following the UNE/EN ISO/IEC 17025:2005 for detection of the emerging yeast Candida auris.

Martínez-Murcia A, Navarro A, Bru G, Chowdhary A, Hagen F, Meis JF.

Mycoses. 2018 Nov;61(11):877-884. doi: 10.1111/myc.12834. Epub 2018 Aug 20.

PMID:
30059175
47.

Global Molecular Diversity of the Halotolerant Fungus Hortaea werneckii.

Marchetta A, Gerrits van den Ende B, Al-Hatmi AMS, Hagen F, Zalar P, Sudhadham M, Gunde-Cimerman N, Urzì C, de Hoog S, De Leo F.

Life (Basel). 2018 Jul 23;8(3). pii: E31. doi: 10.3390/life8030031.

48.

Low-Cost Tetraplex PCR for the Global Spreading Multi-Drug Resistant Fungus, Candida auris and Its Phylogenetic Relatives.

Arastehfar A, Fang W, Badali H, Vaezi A, Jiang W, Liao W, Pan W, Hagen F, Boekhout T.

Front Microbiol. 2018 May 29;9:1119. doi: 10.3389/fmicb.2018.01119. eCollection 2018.

49.

Microsatellite genotyping of clinical Candida parapsilosis isolates.

Badali H, Rezaie S, Meis JF, Agha Kuchak Afshari S, Modiri M, Hagen F, Moazeni M, Mohammadi R, Khodavaisy S.

Curr Med Mycol. 2017 Dec;3(4):15-20. doi: 10.29252/cmm.3.4.15.

50.

Airway persistence by the emerging multi-azole-resistant Rasamsonia argillacea complex in cystic fibrosis.

Abdolrasouli A, Bercusson AC, Rhodes JL, Hagen F, Buil JB, Tang AYY, de Boer LL, Shah A, Milburn AJ, Elborn JS, Jones AL, Meis JF, Fisher MC, Schelenz S, Simmonds NJ, Armstrong-James D.

Mycoses. 2018 Sep;61(9):665-673. doi: 10.1111/myc.12789. Epub 2018 Jun 20.

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