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Items: 20


Variation in the Intensity of Selection on Codon Bias over Time Causes Contrasting Patterns of Base Composition Evolution in Drosophila.

Jackson BC, Campos JL, Haddrill PR, Charlesworth B, Zeng K.

Genome Biol Evol. 2017 Jan 1;9(1):102-123. doi: 10.1093/gbe/evw291.


The Discovery, Distribution, and Evolution of Viruses Associated with Drosophila melanogaster.

Webster CL, Waldron FM, Robertson S, Crowson D, Ferrari G, Quintana JF, Brouqui JM, Bayne EH, Longdon B, Buck AH, Lazzaro BP, Akorli J, Haddrill PR, Obbard DJ.

PLoS Biol. 2015 Jul 14;13(7):e1002210. doi: 10.1371/journal.pbio.1002210. eCollection 2015 Jul.


Strain-specific and pooled genome sequences for populations of Drosophila melanogaster from three continents.

Bergman CM, Haddrill PR.

F1000Res. 2015 Jan 29;4:31. doi: 10.12688/f1000research.6090.1. eCollection 2015.


The relation between recombination rate and patterns of molecular evolution and variation in Drosophila melanogaster.

Campos JL, Halligan DL, Haddrill PR, Charlesworth B.

Mol Biol Evol. 2014 Apr;31(4):1010-28. doi: 10.1093/molbev/msu056. Epub 2014 Jan 30.


Estimation of the spontaneous mutation rate per nucleotide site in a Drosophila melanogaster full-sib family.

Keightley PD, Ness RW, Halligan DL, Haddrill PR.

Genetics. 2014 Jan;196(1):313-20. doi: 10.1534/genetics.113.158758. Epub 2013 Nov 8.


Codon usage bias and effective population sizes on the X chromosome versus the autosomes in Drosophila melanogaster.

Campos JL, Zeng K, Parker DJ, Charlesworth B, Haddrill PR.

Mol Biol Evol. 2013 Apr;30(4):811-23. doi: 10.1093/molbev/mss222. Epub 2012 Nov 29.


Molecular evolution in nonrecombining regions of the Drosophila melanogaster genome.

Campos JL, Charlesworth B, Haddrill PR.

Genome Biol Evol. 2012;4(3):278-88. doi: 10.1093/gbe/evs010. Epub 2012 Jan 23.


Genetic diversity, population structure and Wolbachia infection status in a worldwide sample of Drosophila melanogaster and D. simulans populations.

Verspoor RL, Haddrill PR.

PLoS One. 2011;6(10):e26318. doi: 10.1371/journal.pone.0026318. Epub 2011 Oct 12.


Ancestral polymorphisms in Drosophila pseudoobscura and Drosophila miranda.

Nowell RW, Charlesworth B, Haddrill PR.

Genet Res (Camb). 2011 Aug;93(4):255-63. doi: 10.1017/S0016672311000206. Epub 2011 Jul 18.


Determinants of synonymous and nonsynonymous variability in three species of Drosophila.

Haddrill PR, Zeng K, Charlesworth B.

Mol Biol Evol. 2011 May;28(5):1731-43. doi: 10.1093/molbev/msq354. Epub 2010 Dec 29.


Estimating the parameters of selection on nonsynonymous mutations in Drosophila pseudoobscura and D. miranda.

Haddrill PR, Loewe L, Charlesworth B.

Genetics. 2010 Aug;185(4):1381-96. doi: 10.1534/genetics.110.117614. Epub 2010 Jun 1.


A multispecies approach for comparing sequence evolution of X-linked and autosomal sites in Drosophila.

Vicoso B, Haddrill PR, Charlesworth B.

Genet Res (Camb). 2008 Oct;90(5):421-31. doi: 10.1017/S0016672308009804.


Elevated levels of expression associated with regions of the Drosophila genome that lack crossing over.

Haddrill PR, Waldron FM, Charlesworth B.

Biol Lett. 2008 Dec 23;4(6):758-61. doi: 10.1098/rsbl.2008.0376.


Female multiple mating in wild and laboratory populations of the two-spot ladybird, Adalia bipunctata.

Haddrill PR, Shuker DM, Amos W, Majerus ME, Mayes S.

Mol Ecol. 2008 Jul;17(13):3189-97. doi: 10.1111/j.1365-294X.2008.03812.x. Epub 2008 May 30.


Positive and negative selection on noncoding DNA in Drosophila simulans.

Haddrill PR, Bachtrog D, Andolfatto P.

Mol Biol Evol. 2008 Sep;25(9):1825-34. doi: 10.1093/molbev/msn125. Epub 2008 May 29.


Non-neutral processes drive the nucleotide composition of non-coding sequences in Drosophila.

Haddrill PR, Charlesworth B.

Biol Lett. 2008 Aug 23;4(4):438-41. doi: 10.1098/rsbl.2008.0174.


The age and evolution of an antiviral resistance mutation in Drosophila melanogaster.

Bangham J, Obbard DJ, Kim KW, Haddrill PR, Jiggins FM.

Proc Biol Sci. 2007 Aug 22;274(1621):2027-34.


Reduced efficacy of selection in regions of the Drosophila genome that lack crossing over.

Haddrill PR, Halligan DL, Tomaras D, Charlesworth B.

Genome Biol. 2007;8(2):R18.


Patterns of intron sequence evolution in Drosophila are dependent upon length and GC content.

Haddrill PR, Charlesworth B, Halligan DL, Andolfatto P.

Genome Biol. 2005;6(8):R67. Epub 2005 Jul 27.


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