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Items: 1 to 50 of 57

1.

Emergence of a vancomycin-variable Enterococcus faecium ST1421 strain containing a deletion in vanX.

Hansen TA, Pedersen MS, Nielsen LG, Ma CMG, Søes LM, Worning P, Østergaard C, Westh H, Pinholt M, Schønning K.

J Antimicrob Chemother. 2018 Aug 2. doi: 10.1093/jac/dky308. [Epub ahead of print]

PMID:
30113682
2.

A Sporadic Four-Year Hospital Outbreak of a ST97-IVa MRSA With Half of the Patients First Identified in the Community.

Rubin IM, Hansen TA, Klingenberg AM, Petersen AM, Worning P, Westh H, Bartels MD.

Front Microbiol. 2018 Jul 10;9:1494. doi: 10.3389/fmicb.2018.01494. eCollection 2018.

3.

A near full-length open reading frame next generation sequencing assay for genotyping and identification of resistance-associated variants in hepatitis C virus.

Pedersen MS, Fahnøe U, Hansen TA, Pedersen AG, Jenssen H, Bukh J, Schønning K.

J Clin Virol. 2018 Aug;105:49-56. doi: 10.1016/j.jcv.2018.05.012. Epub 2018 Jun 1.

PMID:
29886373
4.

Whole Genome Sequencing of Danish Staphylococcus argenteus Reveals a Genetically Diverse Collection with Clear Separation from Staphylococcus aureus.

Hansen TA, Bartels MD, Høgh SV, Dons LE, Pedersen M, Jensen TG, Kemp M, Skov MN, Gumpert H, Worning P, Westh H.

Front Microbiol. 2017 Aug 9;8:1512. doi: 10.3389/fmicb.2017.01512. eCollection 2017.

5.

Acute hypoxia in a simulated high-altitude airdrop scenario due to oxygen system failure.

Ottestad W, Hansen TA, Pradhan G, Stepanek J, Høiseth LØ, Kåsin JI.

J Appl Physiol (1985). 2017 Dec 1;123(6):1443-1450. doi: 10.1152/japplphysiol.00169.2017. Epub 2017 Aug 24.

PMID:
28839003
6.

Draft genome sequence of a Kluyvera intermedia isolate from a patient with a pancreatic abscess.

Thele R, Gumpert H, Christensen LB, Worning P, Schønning K, Westh H, Hansen TA.

J Glob Antimicrob Resist. 2017 Sep;10:1-2. doi: 10.1016/j.jgar.2017.05.007. Epub 2017 May 30.

PMID:
28576740
7.

High diversity of picornaviruses in rats from different continents revealed by deep sequencing.

Hansen TA, Mollerup S, Nguyen NP, White NE, Coghlan M, Alquezar-Planas DE, Joshi T, Jensen RH, Fridholm H, Kjartansdóttir KR, Mourier T, Warnow T, Belsham GJ, Bunce M, Willerslev E, Nielsen LP, Vinner L, Hansen AJ.

Emerg Microbes Infect. 2016 Aug 17;5(8):e90. doi: 10.1038/emi.2016.90.

8.

Vancomycin gene selection in the microbiome of urban Rattus norvegicus from hospital environment.

Hansen TA, Joshi T, Larsen AR, Andersen PS, Harms K, Mollerup S, Willerslev E, Fuursted K, Nielsen LP, Hansen AJ.

Evol Med Public Health. 2016 Aug 3;2016(1):219-26. doi: 10.1093/emph/eow021. Print 2016.

9.

Identification of Known and Novel Recurrent Viral Sequences in Data from Multiple Patients and Multiple Cancers.

Friis-Nielsen J, Kjartansdóttir KR, Mollerup S, Asplund M, Mourier T, Jensen RH, Hansen TA, Rey-Iglesia A, Richter SR, Nielsen IB, Alquezar-Planas DE, Olsen PV, Vinner L, Fridholm H, Nielsen LP, Willerslev E, Sicheritz-Pontén T, Lund O, Hansen AJ, Izarzugaza JM, Brunak S.

Viruses. 2016 Feb 19;8(2). pii: E53. doi: 10.3390/v8020053.

10.

Propionibacterium acnes: Disease-Causing Agent or Common Contaminant? Detection in Diverse Patient Samples by Next-Generation Sequencing.

Mollerup S, Friis-Nielsen J, Vinner L, Hansen TA, Richter SR, Fridholm H, Herrera JA, Lund O, Brunak S, Izarzugaza JM, Mourier T, Nielsen LP, Hansen AJ.

J Clin Microbiol. 2016 Apr;54(4):980-7. doi: 10.1128/JCM.02723-15. Epub 2016 Jan 27.

11.

Action slips during whole-body vibration.

Ishimatsu K, Meland A, Hansen TAS, Kåsin JI, Wagstaff AS.

Appl Ergon. 2016 Jul;55:241-247. doi: 10.1016/j.apergo.2015.10.014. Epub 2015 Nov 21.

PMID:
26611989
12.

New Type of Papillomavirus and Novel Circular Single Stranded DNA Virus Discovered in Urban Rattus norvegicus Using Circular DNA Enrichment and Metagenomics.

Hansen TA, Fridholm H, Frøslev TG, Kjartansdóttir KR, Willerslev E, Nielsen LP, Hansen AJ.

PLoS One. 2015 Nov 11;10(11):e0141952. doi: 10.1371/journal.pone.0141952. eCollection 2015.

13.

Characterizing novel endogenous retroviruses from genetic variation inferred from short sequence reads.

Mourier T, Mollerup S, Vinner L, Hansen TA, Kjartansdóttir KR, Guldberg Frøslev T, Snogdal Boutrup T, Nielsen LP, Willerslev E, Hansen AJ.

Sci Rep. 2015 Oct 23;5:15644. doi: 10.1038/srep15644.

14.

A Comprehensive Strategy for Accurate Mutation Detection of the Highly Homologous PMS2.

Li J, Dai H, Feng Y, Tang J, Chen S, Tian X, Gorman E, Schmitt ES, Hansen TA, Wang J, Plon SE, Zhang VW, Wong LJ.

J Mol Diagn. 2015 Sep;17(5):545-53. doi: 10.1016/j.jmoldx.2015.04.001.

PMID:
26320870
15.

Target-dependent enrichment of virions determines the reduction of high-throughput sequencing in virus discovery.

Jensen RH, Mollerup S, Mourier T, Hansen TA, Fridholm H, Nielsen LP, Willerslev E, Hansen AJ, Vinner L.

PLoS One. 2015 Apr 8;10(4):e0122636. doi: 10.1371/journal.pone.0122636. eCollection 2015.

16.

Traces of ATCV-1 associated with laboratory component contamination.

Kjartansdóttir KR, Friis-Nielsen J, Asplund M, Mollerup S, Mourier T, Jensen RH, Hansen TA, Rey-Iglesia A, Richter SR, Alquezar-Planas DE, Olsen PV, Vinner L, Fridholm H, Sicheritz-Pontén T, Nielsen LP, Brunak S, Willerslev E, Izarzugaza JM, Hansen AJ.

Proc Natl Acad Sci U S A. 2015 Mar 3;112(9):E925-6. doi: 10.1073/pnas.1423756112. Epub 2015 Feb 5. No abstract available.

17.

Middle-down hybrid chromatography/tandem mass spectrometry workflow for characterization of combinatorial post-translational modifications in histones.

Sidoli S, Schwämmle V, Ruminowicz C, Hansen TA, Wu X, Helin K, Jensen ON.

Proteomics. 2014 Oct;14(19):2200-11. doi: 10.1002/pmic.201400084. Epub 2014 Aug 28.

PMID:
25073878
18.

Deconvolution of mixture spectra and increased throughput of peptide identification by utilization of intensified complementary ions formed in tandem mass spectrometry.

Kryuchkov F, Verano-Braga T, Hansen TA, Sprenger RR, Kjeldsen F.

J Proteome Res. 2013 Jul 5;12(7):3362-71. doi: 10.1021/pr400210m. Epub 2013 Jun 19.

PMID:
23725413
19.

Automated and high confidence protein phosphorylation site localization using complementary collision-activated dissociation and electron transfer dissociation tandem mass spectrometry.

Hansen TA, Sylvester M, Jensen ON, Kjeldsen F.

Anal Chem. 2012 Nov 20;84(22):9694-9. doi: 10.1021/ac302364r. Epub 2012 Oct 30.

PMID:
23061748
20.
21.

Arterial oxygen pressure following whole-body vibration at altitude.

Hansen TA, Kåsin JI, Edvardsen A, Christensen CC, Wagstaff AS.

Aviat Space Environ Med. 2012 Apr;83(4):431-5.

PMID:
22462372
22.

The Stem Cell Discovery Engine: an integrated repository and analysis system for cancer stem cell comparisons.

Ho Sui SJ, Begley K, Reilly D, Chapman B, McGovern R, Rocca-Sera P, Maguire E, Altschuler GM, Hansen TA, Sompallae R, Krivtsov A, Shivdasani RA, Armstrong SA, Culhane AC, Correll M, Sansone SA, Hofmann O, Hide W.

Nucleic Acids Res. 2012 Jan;40(Database issue):D984-91. doi: 10.1093/nar/gkr1051. Epub 2011 Nov 24.

23.

Multidimensional strategy for sensitive phosphoproteomics incorporating protein prefractionation combined with SIMAC, HILIC, and TiO(2) chromatography applied to proximal EGF signaling.

Engholm-Keller K, Hansen TA, Palmisano G, Larsen MR.

J Proteome Res. 2011 Dec 2;10(12):5383-97. doi: 10.1021/pr200641x. Epub 2011 Oct 26.

PMID:
21955146
24.

Electron transfer dissociation reveals changes in the cleavage frequencies of backbone bonds distant to amide-to-ester substitutions in polypeptides.

Hansen TA, Jung HR, Kjeldsen F.

J Am Soc Mass Spectrom. 2011 Nov;22(11):1953-7. doi: 10.1007/s13361-011-0242-5. Epub 2011 Sep 15.

PMID:
21952783
25.

Meiotic recombination in human oocytes.

Cheng EY, Hunt PA, Naluai-Cecchini TA, Fligner CL, Fujimoto VY, Pasternack TL, Schwartz JM, Steinauer JE, Woodruff TJ, Cherry SM, Hansen TA, Vallente RU, Broman KW, Hassold TJ.

PLoS Genet. 2009 Sep;5(9):e1000661. doi: 10.1371/journal.pgen.1000661. Epub 2009 Sep 18.

26.

A quantitative study of the microstructure and biochemistry of the medial meniscal horn attachments.

Villegas DF, Hansen TA, Liu DF, Donahue TL.

Ann Biomed Eng. 2008 Jan;36(1):123-31. Epub 2007 Nov 13.

PMID:
17999192
27.

[Minimally invasive treatment of primary hyperparathyroidism].

Lindekleiv H, Due J, Thuy L, Hansen TA, Nilsen PA.

Tidsskr Nor Laegeforen. 2007 May 3;127(9):1204-6. Norwegian.

28.

Methanol utilizing Desulfotomaculum species utilizes hydrogen in a methanol-fed sulfate-reducing bioreactor.

Balk M, Weijma J, Goorissen HP, Ronteltap M, Hansen TA, Stams AJ.

Appl Microbiol Biotechnol. 2007 Jan;73(5):1203-11. Epub 2006 Oct 7.

PMID:
17028873
29.

Methanol utilization in defined mixed cultures of thermophilic anaerobes in the presence of sulfate.

Goorissen HP, Stams AJ, Hansen TA.

FEMS Microbiol Ecol. 2004 Sep 1;49(3):489-94. doi: 10.1016/j.femsec.2004.05.004.

30.
31.

Effects of sampling standardization on estimates of Phanerozoic marine diversification.

Alroy J, Marshall CR, Bambach RK, Bezusko K, Foote M, Fursich FT, Hansen TA, Holland SM, Ivany LC, Jablonski D, Jacobs DK, Jones DC, Kosnik MA, Lidgard S, Low S, Miller AI, Novack-Gottshall PM, Olszewski TD, Patzkowsky ME, Raup DM, Roy K, Sepkoski JJ Jr, Sommers MG, Wagner PJ, Webber A.

Proc Natl Acad Sci U S A. 2001 May 22;98(11):6261-6. Epub 2001 May 15.

32.
35.

Electron-dense granules in Desulfovibrio gigas do not consist of inorganic triphosphate but of a glucose pentakis(diphosphate).

Hensgens CM, Santos H, Zhang C, Kruizinga WH, Hansen TA.

Eur J Biochem. 1996 Dec 1;242(2):327-31.

36.

Demethylation of dimethylsulfoniopropionate to 3-S-methylmercaptopropionate by marine sulfate-reducing bacteria.

van der Maarel MJ, Jansen M, Haanstra R, Meijer WG, Hansen TA.

Appl Environ Microbiol. 1996 Nov;62(11):3978-84.

37.
38.

Methanogenic conversion of 3-s-methylmercaptopropionate to 3-mercaptopropionate.

van der Maarel M, Jansen M, Hansen TA.

Appl Environ Microbiol. 1995 Jan;61(1):48-51.

39.

Metabolism of sulfate-reducing prokaryotes.

Hansen TA.

Antonie Van Leeuwenhoek. 1994;66(1-3):165-85. Review.

PMID:
7747930
40.

Purification and characterization of an oxygen-labile, NAD-dependent alcohol dehydrogenase from Desulfovibrio gigas.

Hensgens CM, Vonck J, Van Beeumen J, van Bruggen EF, Hansen TA.

J Bacteriol. 1993 May;175(10):2859-63.

41.

Involvement of an Intracellular Oligogalacturonate Hydrolase in Metabolism of Pectin by Clostridium thermosaccharolyticum.

Van Rijssel M, Smidt MP, Van Kouwen G, Hansen TA.

Appl Environ Microbiol. 1993 Mar;59(3):837-42.

43.

Betaine fermentation and oxidation by marine desulfuromonas strains.

Heijthuijsen JH, Hansen TA.

Appl Environ Microbiol. 1989 Apr;55(4):965-9.

44.

A tsunami deposit at the cretaceous-tertiary boundary in Texas.

Bourgeois J, Hansen TA, Wiberg PL, Kauffman EG.

Science. 1988 Jul 29;241(4865):567-70.

PMID:
17774578
45.

Physiology of sulphate-reducing bacteria.

Hansen TA.

Microbiol Sci. 1988 Mar;5(3):81-4. Review. No abstract available. Erratum in: Microbiol Sci 1988 Jun;5(6):191.

PMID:
3079223
46.

[The Board of Child Welfare--friend or foe?].

Hansen TA, Jespersen EF.

Tidsskr Nor Laegeforen. 1985 Dec 10;105(34-36):2492-4. Norwegian. No abstract available.

PMID:
4089851
47.
48.

Studies of lung fluid balance in newborn lambs.

Bland RD, Hansen TA, Hazinski TA, Haberkern CM, Bressack MA.

Ann N Y Acad Sci. 1982;384:126-45. No abstract available.

PMID:
6953816
49.

Fossil molluscan larvae: a new biostratigraphic tool.

Hansen TA.

Science. 1981 Nov 20;214(4523):915-6.

PMID:
17782448
50.

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