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Items: 20

1.

Drift and Directional Selection Are the Evolutionary Forces Driving Gene Expression Divergence in Eye and Brain Tissue of Heliconius Butterflies.

Catalán A, Briscoe AD, Höhna S.

Genetics. 2019 Oct;213(2):581-594. doi: 10.1534/genetics.119.302493. Epub 2019 Aug 29.

2.
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Early Arrival and Climatically-Linked Geographic Expansion of New World Monkeys from Tiny African Ancestors.

Silvestro D, Tejedor MF, Serrano-Serrano ML, Loiseau O, Rossier V, Rolland J, Zizka A, Höhna S, Antonelli A, Salamin N.

Syst Biol. 2019 Jan 1;68(1):78-92. doi: 10.1093/sysbio/syy046.

4.

Testing the Role of the Red Queen and Court Jester as Drivers of the Macroevolution of Apollo Butterflies.

Condamine FL, Rolland J, Höhna S, Sperling FAH, Sanmartín I.

Syst Biol. 2018 Nov 1;67(6):940-964. doi: 10.1093/sysbio/syy009.

PMID:
29438538
5.

New evidence for the recent divergence of Devil's Hole pupfish and the plausibility of elevated mutation rates in endangered taxa.

Martin CH, Höhna S.

Mol Ecol. 2018 Feb;27(4):831-838. doi: 10.1111/mec.14404. Epub 2017 Nov 28.

PMID:
29148600
6.

P3: Phylogenetic Posterior Prediction in RevBayes.

Höhna S, Coghill LM, Mount GG, Thomson RC, Brown JM.

Mol Biol Evol. 2018 Apr 1;35(4):1028-1034. doi: 10.1093/molbev/msx286. Erratum in: Mol Biol Evol. 2018 Jul 1;35(7):1821.

PMID:
29136211
7.

Cladogenetic and Anagenetic Models of Chromosome Number Evolution: A Bayesian Model Averaging Approach.

Freyman WA, Höhna S.

Syst Biol. 2018 Mar 1;67(2):195-215. doi: 10.1093/sysbio/syx065.

PMID:
28945917
8.

The complex effects of demographic history on the estimation of substitution rate: concatenated gene analysis results in no more than twofold overestimation.

Martin CH, Höhna S, Crawford JE, Turner BJ, Richards EJ, Simons LH.

Proc Biol Sci. 2017 Aug 16;284(1860). pii: 20170537. doi: 10.1098/rspb.2017.0537. No abstract available.

9.

Phylogenetic Inference Using RevBayes.

Höhna S, Landis MJ, Heath TA.

Curr Protoc Bioinformatics. 2017 May 2;57:6.16.1-6.16.34. doi: 10.1002/cpbi.22.

PMID:
28463399
10.

Critically evaluating the theory and performance of Bayesian analysis of macroevolutionary mixtures.

Moore BR, Höhna S, May MR, Rannala B, Huelsenbeck JP.

Proc Natl Acad Sci U S A. 2016 Aug 23;113(34):9569-74. doi: 10.1073/pnas.1518659113. Epub 2016 Aug 10.

11.

RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language.

Höhna S, Landis MJ, Heath TA, Boussau B, Lartillot N, Moore BR, Huelsenbeck JP, Ronquist F.

Syst Biol. 2016 Jul;65(4):726-36. doi: 10.1093/sysbio/syw021. Epub 2016 May 28.

12.

TESS: an R package for efficiently simulating phylogenetic trees and performing Bayesian inference of lineage diversification rates.

Höhna S, May MR, Moore BR.

Bioinformatics. 2016 Mar 1;32(5):789-91. doi: 10.1093/bioinformatics/btv651. Epub 2015 Nov 4.

PMID:
26543171
13.

The time-dependent reconstructed evolutionary process with a key-role for mass-extinction events.

Höhna S.

J Theor Biol. 2015 Sep 7;380:321-31. doi: 10.1016/j.jtbi.2015.06.005. Epub 2015 Jun 12.

PMID:
26073724
14.

Probabilistic graphical model representation in phylogenetics.

Höhna S, Heath TA, Boussau B, Landis MJ, Ronquist F, Huelsenbeck JP.

Syst Biol. 2014 Sep;63(5):753-71. doi: 10.1093/sysbio/syu039. Epub 2014 Jun 20.

15.

Likelihood inference of non-constant diversification rates with incomplete taxon sampling.

Höhna S.

PLoS One. 2014 Jan 6;9(1):e84184. doi: 10.1371/journal.pone.0084184. eCollection 2014.

16.

Fast simulation of reconstructed phylogenies under global time-dependent birth-death processes.

Höhna S.

Bioinformatics. 2013 Jun 1;29(11):1367-74. doi: 10.1093/bioinformatics/btt153. Epub 2013 Mar 29.

PMID:
23543414
17.

MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.

Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP.

Syst Biol. 2012 May;61(3):539-42. doi: 10.1093/sysbio/sys029. Epub 2012 Feb 22.

18.

Non-monophyly and intricate morphological evolution within the avian family Cettiidae revealed by multilocus analysis of a taxonomically densely sampled dataset.

Alström P, Höhna S, Gelang M, Ericson PG, Olsson U.

BMC Evol Biol. 2011 Dec 5;11:352. doi: 10.1186/1471-2148-11-352.

19.

Guided tree topology proposals for Bayesian phylogenetic inference.

Höhna S, Drummond AJ.

Syst Biol. 2012 Jan;61(1):1-11. doi: 10.1093/sysbio/syr074. Epub 2011 Aug 9.

PMID:
21828081
20.

Inferring speciation and extinction rates under different sampling schemes.

Höhna S, Stadler T, Ronquist F, Britton T.

Mol Biol Evol. 2011 Sep;28(9):2577-89. doi: 10.1093/molbev/msr095. Epub 2011 Apr 11.

PMID:
21482666

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