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Clonal Diversity, Virulence Potential and Antimicrobial Resistance of Escherichia coli Causing Community Acquired Urinary Tract Infection in Switzerland.

Nüesch-Inderbinen MT, Baschera M, Zurfluh K, Hächler H, Nüesch H, Stephan R.

Front Microbiol. 2017 Dec 1;8:2334. doi: 10.3389/fmicb.2017.02334. eCollection 2017.


Screening for fecal carriage of MCR-producing Enterobacteriaceae in healthy humans and primary care patients.

Zurfluh K, Stephan R, Widmer A, Poirel L, Nordmann P, Nüesch HJ, Hächler H, Nüesch-Inderbinen M.

Antimicrob Resist Infect Control. 2017 Mar 14;6:28. doi: 10.1186/s13756-017-0186-z. eCollection 2017.


Detection of Shigella sonnei in a respiratory specimen in a patient with subacute atypical pneumonia.

Nahid H, Staub D, Hächler H, Albrich WC.

Infection. 2017 Apr;45(2):241-244. doi: 10.1007/s15010-016-0967-y. Epub 2016 Dec 1.


Draft Genome Sequence of Escherichia coli 26R 793, a Plasmid-Free Recipient Strain Commonly Used in Conjugation Assays.

Wang J, Hurley D, McGrath K, Bai L, Hächler H, Stephan R, Fanning S.

Genome Announc. 2016 Oct 20;4(5). pii: e00707-16. doi: 10.1128/genomeA.00707-16.


Long-term shedding of CTX-M-15-producing Escherichia coli B2:ST127 by a healthy asymptomatic carrier.

Zurfluh K, Hächler H, Stephan R, Nüesch-Inderbinen M.

Int J Antimicrob Agents. 2016 Oct;48(4):466. doi: 10.1016/j.ijantimicag.2016.08.004. Epub 2016 Sep 7. No abstract available.


Horizontal Acquisition of a Multidrug-Resistance Module (R-type ASSuT) Is Responsible for the Monophasic Phenotype in a Widespread Clone of Salmonella Serovar 4,[5],12:i:.

García P, Malorny B, Rodicio MR, Stephan R, Hächler H, Guerra B, Lucarelli C.

Front Microbiol. 2016 May 10;7:680. doi: 10.3389/fmicb.2016.00680. eCollection 2016.


Shigella Antimicrobial Drug Resistance Mechanisms, 2004-2014.

Nüesch-Inderbinen M, Heini N, Zurfluh K, Althaus D, Hächler H, Stephan R.

Emerg Infect Dis. 2016 Jun;22(6):1083-5. doi: 10.3201/eid2206.152088.


Occurrence of the Plasmid-Borne mcr-1 Colistin Resistance Gene in Extended-Spectrum-β-Lactamase-Producing Enterobacteriaceae in River Water and Imported Vegetable Samples in Switzerland.

Zurfuh K, Poirel L, Nordmann P, Nüesch-Inderbinen M, Hächler H, Stephan R.

Antimicrob Agents Chemother. 2016 Mar 25;60(4):2594-5. doi: 10.1128/AAC.00066-16. Print 2016 Apr. No abstract available.


Cross-border outbreak of Salmonella enterica ssp. enterica serovar Bovismorbificans: multiple approaches for an outbreak investigation in Germany and Switzerland.

Knoblauch AM, Bratschi MW, Zuske MK, Althaus D, Stephan R, Hächler H, Baumgartner A, Prager R, Rabsch W, Altpeter E, Jost M, Mäusezahl M, Hatz C, Kiefer S.

Swiss Med Wkly. 2015 Oct 2;145:w14182. doi: 10.4414/smw.2015.14182. eCollection 2015.


Salmonella enterica Serovar Szentes, a Rare Serotype Causing a 9-Month Outbreak in 2013 and 2014 in Switzerland.

Nüesch-Inderbinen M, Cernela N, Althaus D, Hächler H, Stephan R.

Foodborne Pathog Dis. 2015 Nov;12(11):887-90. doi: 10.1089/fpd.2015.1996. Epub 2015 Aug 19.


Assessment of the Prevalence of Extended-Spectrum β-Lactamase-Producing Enterobacteriaceae in Ready-to-Eat Salads, Fresh-Cut Fruit, and Sprouts from the Swiss Market.

Nüesch-Inderbinen M, Zurfluh K, Peterhans S, Hächler H, Stephan R.

J Food Prot. 2015 Jun;78(6):1178-81. doi: 10.4315/0362-028X.JFP-15-018.


Emergence of Escherichia coli producing OXA-48 β-lactamase in the community in Switzerland.

Zurfluh K, Nüesch-Inderbinen MT, Poirel L, Nordmann P, Hächler H, Stephan R.

Antimicrob Resist Infect Control. 2015 Mar 26;4:9. doi: 10.1186/s13756-015-0051-x. eCollection 2015.


Replicon typing of plasmids carrying blaCTX-M-15 among Enterobacteriaceae isolated at the environment, livestock and human interface.

Zurfluh K, Glier M, Hächler H, Stephan R.

Sci Total Environ. 2015 Jul 15;521-522:75-8. doi: 10.1016/j.scitotenv.2015.03.079. Epub 2015 Mar 28.


Extended-spectrum-β-lactamase-producing Enterobacteriaceae isolated from vegetables imported from the Dominican Republic, India, Thailand, and Vietnam.

Zurfluh K, Nüesch-Inderbinen M, Morach M, Zihler Berner A, Hächler H, Stephan R.

Appl Environ Microbiol. 2015 May 1;81(9):3115-20. doi: 10.1128/AEM.00258-15. Epub 2015 Feb 27.


Characterization of the genetic environment of bla ESBL genes, integrons and toxin-antitoxin systems identified on large transferrable plasmids in multi-drug resistant Escherichia coli.

Wang J, Stephan R, Zurfluh K, Hächler H, Fanning S.

Front Microbiol. 2015 Jan 6;5:716. doi: 10.3389/fmicb.2014.00716. eCollection 2014.


Repeated isolation of Salmonella enterica Goverdhan, a very rare serovar, from Danish poultry surveillance samples.

Pedersen K, Sørensen G, Szabo I, Hächler H, Le Hello S.

Vet Microbiol. 2014 Dec 5;174(3-4):596-599. doi: 10.1016/j.vetmic.2014.09.024. Epub 2014 Oct 7.


Replicon typing of plasmids carrying bla CTX-M-1 in Enterobacteriaceae of animal, environmental and human origin.

Zurfluh K, Jakobi G, Stephan R, Hächler H, Nüesch-Inderbinen M.

Front Microbiol. 2014 Oct 30;5:555. doi: 10.3389/fmicb.2014.00555. eCollection 2014.


Nucleotide sequences of 16 transmissible plasmids identified in nine multidrug-resistant Escherichia coli isolates expressing an ESBL phenotype isolated from food-producing animals and healthy humans.

Wang J, Stephan R, Power K, Yan Q, Hächler H, Fanning S.

J Antimicrob Chemother. 2014 Oct;69(10):2658-68. doi: 10.1093/jac/dku206. Epub 2014 Jun 11.


Quinolone resistance mechanisms among extended-spectrum beta-lactamase (ESBL) producing Escherichia coli isolated from rivers and lakes in Switzerland.

Zurfluh K, Abgottspon H, Hächler H, Nüesch-Inderbinen M, Stephan R.

PLoS One. 2014 Apr 22;9(4):e95864. doi: 10.1371/journal.pone.0095864. eCollection 2014.


Quinolone resistance mechanisms in Salmonella enterica serovars Hadar, Kentucky, Virchow, Schwarzengrund, and 4,5,12:i:-, isolated from humans in Switzerland, and identification of a novel qnrD variant, qnrD2, in S. Hadar.

Abgottspon H, Zurfluh K, Nüesch-Inderbinen M, Hächler H, Stephan R.

Antimicrob Agents Chemother. 2014 Jun;58(6):3560-3. doi: 10.1128/AAC.02404-14. Epub 2014 Apr 14.


Extended-spectrum β-lactamase (ESBL)-producing Enterobacteriaceae: a threat from the kitchen.

Tschudin-Sutter S, Frei R, Stephan R, Hächler H, Nogarth D, Widmer AF.

Infect Control Hosp Epidemiol. 2014 May;35(5):581-4. doi: 10.1086/675831.


Presence of AmpC beta-lactamases, CSA-1, CSA-2, CMA-1, and CMA-2 conferring an unusual resistance phenotype in Cronobacter sakazakii and Cronobacter malonaticus.

Müller A, Hächler H, Stephan R, Lehner A.

Microb Drug Resist. 2014 Aug;20(4):275-80. doi: 10.1089/mdr.2013.0188. Epub 2014 Feb 25.


Hemolytic uremic syndrome in a 65-Year-old male linked to a very unusual type of stx2e- and eae-harboring O51:H49 shiga toxin-producing Escherichia coli.

Fasel D, Mellmann A, Cernela N, Hächler H, Fruth A, Khanna N, Egli A, Beckmann C, Hirsch HH, Goldenberger D, Stephan R.

J Clin Microbiol. 2014 Apr;52(4):1301-3. doi: 10.1128/JCM.03459-13. Epub 2014 Feb 5.


Enterobacteriaceae with extended-spectrum- and pAmpC-type β-lactamase-encoding genes isolated from freshwater fish from two lakes in Switzerland.

Abgottspon H, Nüesch-Inderbinen MT, Zurfluh K, Althaus D, Hächler H, Stephan R.

Antimicrob Agents Chemother. 2014;58(4):2482-4. doi: 10.1128/AAC.02689-13. Epub 2014 Jan 21. No abstract available.


Characteristics of extended-spectrum cephalosporin-resistant Escherichia coli isolated from Swiss and imported poultry meat.

Abgottspon H, Stephan R, Bagutti C, Brodmann P, Hächler H, Zurfluh K.

J Food Prot. 2014 Jan;77(1):112-5. doi: 10.4315/0362-028X.JFP-13-120.


Diarrheagenic enteroaggregative Escherichia coli causing urinary tract infection and bacteremia leading to sepsis.

Herzog K, Engeler Dusel J, Hugentobler M, Beutin L, Sägesser G, Stephan R, Hächler H, Nüesch-Inderbinen M.

Infection. 2014 Apr;42(2):441-4. doi: 10.1007/s15010-013-0569-x. Epub 2013 Dec 10.


No evidence so far for the dissemination of carbapenemase-producing Enterobactericeae in the community in Switzerland.

Nüesch-Inderbinen M, Zurfluh K, Hächler H, Stephan R.

Antimicrob Resist Infect Control. 2013 Sep 4;2:23. doi: 10.1186/2047-2994-2-23. eCollection 2013.


Characteristics of enteroaggregative Escherichia coli isolated from healthy carriers and from patients with diarrhoea.

Nüesch-Inderbinen MT, Hofer E, Hächler H, Beutin L, Stephan R.

J Med Microbiol. 2013 Dec;62(Pt 12):1828-34. doi: 10.1099/jmm.0.065177-0. Epub 2013 Sep 5.


ESBL-producing Enterobacteriaceae: occurrence, risk factors for fecal carriage and strain traits in the Swiss slaughter cattle population younger than 2 years sampled at abattoir level.

Reist M, Geser N, Hächler H, Schärrer S, Stephan R.

PLoS One. 2013 Aug 20;8(8):e71725. doi: 10.1371/journal.pone.0071725. eCollection 2013.


Molecular characterization of bla ESBL-harboring conjugative plasmids identified in multi-drug resistant Escherichia coli isolated from food-producing animals and healthy humans.

Wang J, Stephan R, Karczmarczyk M, Yan Q, Hächler H, Fanning S.

Front Microbiol. 2013 Jul 11;4:188. doi: 10.3389/fmicb.2013.00188. eCollection 2013.


Lack of evidence so far for carbapenemase-producing Enterobacteriaceae in food-producing animals in Switzerland.

Stephan R, Sarno E, Hofer E, Nüesch-Inderbinen MT, Hächler H.

Schweiz Arch Tierheilkd. 2013 Jul;155(7):417-9. doi: 10.1024/0036-7281/a000484. No abstract available.


Outbreak of listerosis due to imported cooked ham, Switzerland 2011.

Hächler H, Marti G, Giannini P, Lehner A, Jost M, Beck J, Weiss F, Bally B, Jermini M, Stephan R, Baumgartner A.

Euro Surveill. 2013 May 2;18(18):20469.


Studying the fate of non-volatile organic compounds in a commercial plasma air purifier.

Schmid S, Seiler C, Gerecke AC, Hächler H, Hilbi H, Frey J, Weidmann S, Meier L, Berchtold C, Zenobi R.

J Hazard Mater. 2013 Jul 15;256-257:76-83. doi: 10.1016/j.jhazmat.2013.04.021. Epub 2013 Apr 22.


Characterization of Salmonella enterica subsp. enterica serovar 4,[5],12:i:- clones isolated from human and other sources in Switzerland between 2007 and 2011.

Gallati C, Stephan R, Hächler H, Malorny B, Schroeter A, Nüesch-Inderbinen M.

Foodborne Pathog Dis. 2013 Jun;10(6):549-54. doi: 10.1089/fpd.2012.1407. Epub 2013 Apr 24.


Cross-sectional study on fecal carriage of Enterobacteriaceae with resistance to extended-spectrum cephalosporins in primary care patients.

Nüesch-Inderbinen MT, Abgottspon H, Zurfluh K, Nüesch HJ, Stephan R, Hächler H.

Microb Drug Resist. 2013 Oct;19(5):362-9. doi: 10.1089/mdr.2013.0013. Epub 2013 Apr 23.


Antimicrobial resistance patterns and genotypes of Salmonella enterica serovar Hadar strains associated with human infections in Switzerland, 2005-2010.

Cernela N, Nüesch-Inderbinen M, Hächler H, Stephan R.

Epidemiol Infect. 2014 Jan;142(1):84-9. doi: 10.1017/S095026881300054X. Epub 2013 Apr 16.


Search for magnetic monopoles in polar volcanic rocks.

Bendtz K, Milstead D, Hächler HP, Hirt AM, Mermod P, Michael P, Sloan T, Tegner C, Thorarinsson SB.

Phys Rev Lett. 2013 Mar 22;110(12):121803. Epub 2013 Mar 22.


Characteristics of extended-spectrum β-lactamase- and carbapenemase-producing Enterobacteriaceae Isolates from rivers and lakes in Switzerland.

Zurfluh K, Hächler H, Nüesch-Inderbinen M, Stephan R.

Appl Environ Microbiol. 2013 May;79(9):3021-6. doi: 10.1128/AEM.00054-13. Epub 2013 Mar 1.


Higher-generation cephalosporin-resistant Escherichia coli in feral birds in Switzerland.

Zurfluh K, Nüesch-Inderbinen M, Stephan R, Hächler H.

Int J Antimicrob Agents. 2013 Mar;41(3):296-7. doi: 10.1016/j.ijantimicag.2012.11.005. Epub 2013 Jan 8. No abstract available.


Characterisation of CTX-M-117, a Pro174Gln variant of CTX-M-15 extended-spectrum β-lactamase, from a bovine Escherichia coli isolate.

Hächler H, Kotsakis SD, Tzouvelekis LS, Geser N, Lehner A, Miriagou V, Stephan R.

Int J Antimicrob Agents. 2013 Jan;41(1):94-5. doi: 10.1016/j.ijantimicag.2012.09.011. Epub 2012 Nov 3. No abstract available.


Epidemic of salmonellosis in passerine birds in Switzerland with spillover to domestic cats.

Giovannini S, Pewsner M, Hüssy D, Hächler H, Ryser Degiorgis MP, von Hirschheydt J, Origgi FC.

Vet Pathol. 2013 Jul;50(4):597-606. doi: 10.1177/0300985812465328. Epub 2012 Nov 2.


Discovery of extended-spectrum beta-lactamase producing Escherichia coli among hunted deer, chamois and ibex.

Stephan R, Hächler H.

Schweiz Arch Tierheilkd. 2012 Nov;154(11):475-8. doi: 10.1024/0036-7281/a000390.


Neonatal hemolytic uremic syndrome after mother-to-child transmission of a low-pathogenic stx2b harboring shiga toxin-producing Escherichia coli.

Stritt A, Tschumi S, Kottanattu L, Bucher BS, Steinmann M, von Steiger N, Stephan R, Hächler H, Simonetti GD.

Clin Infect Dis. 2013 Jan;56(1):114-6. doi: 10.1093/cid/cis851. Epub 2012 Oct 5.


Complete nucleotide sequence of pVQS1 containing a quinolone resistance determinant from Salmonella enterica serovar Virchow associated with foreign travel.

Karczmarczyk M, Stephan R, Hächler H, Fanning S.

J Antimicrob Chemother. 2012 Aug;67(8):1861-4. doi: 10.1093/jac/dks158. Epub 2012 May 2.


Molecular identification of extended-spectrum-β-lactamase genes from Enterobacteriaceae isolated from healthy human carriers in Switzerland.

Geser N, Stephan R, Korczak BM, Beutin L, Hächler H.

Antimicrob Agents Chemother. 2012 Mar;56(3):1609-12. doi: 10.1128/AAC.05539-11. Epub 2011 Dec 12.


Yersinia enterocolitica strains associated with human infections in Switzerland 2001-2010.

Fredriksson-Ahomaa M, Cernela N, Hächler H, Stephan R.

Eur J Clin Microbiol Infect Dis. 2012 Jul;31(7):1543-50. doi: 10.1007/s10096-011-1476-7. Epub 2011 Nov 10.


Genotypes and antibiotic resistances of Campylobacter jejuni and Campylobacter coli isolates from domestic and travel-associated human cases.

Niederer L, Kuhnert P, Egger R, Büttner S, Hächler H, Korczak BM.

Appl Environ Microbiol. 2012 Jan;78(1):288-91. doi: 10.1128/AEM.06194-11. Epub 2011 Oct 21.


Rapid species specific identification and subtyping of Yersinia enterocolitica by MALDI-TOF mass spectrometry.

Stephan R, Cernela N, Ziegler D, Pflüger V, Tonolla M, Ravasi D, Fredriksson-Ahomaa M, Hächler H.

J Microbiol Methods. 2011 Nov;87(2):150-3. doi: 10.1016/j.mimet.2011.08.016. Epub 2011 Sep 3.


Salmonella enterica serotype Virchow associated with human infections in Switzerland: 2004-2009.

Bonalli M, Stephan R, Käppeli U, Cernela N, Adank L, Hächler H.

BMC Infect Dis. 2011 Feb 23;11:49. doi: 10.1186/1471-2334-11-49.

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