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Items: 1 to 50 of 225

1.

Observing the Transformation of Bodily Self-consciousness in the Squeeze-machine Experiment.

Minoura M, Tani I, Ishii T, Gunji YP.

J Vis Exp. 2019 Mar 8;(145). doi: 10.3791/59263.

PMID:
30907882
2.

Ordinal Preferential Attachment: A Self-Organizing Principle Generating Dense Scale-Free Networks.

Haruna T, Gunji YP.

Sci Rep. 2019 Mar 11;9(1):4130. doi: 10.1038/s41598-019-40716-1.

3.

Broken paradox of the heap: Comment on "Does being multi-headed make you better at solving problems? A survey of Physarum-based models and computations" by Chao Gao et al.

Gunji YP, Tani I, Shirakawa T.

Phys Life Rev. 2019 Jan 28. pii: S1571-0645(19)30016-8. doi: 10.1016/j.plrev.2019.01.008. [Epub ahead of print] No abstract available.

PMID:
30713115
4.

Inverse Bayesian inference in swarming behaviour of soldier crabs.

Gunji YP, Murakami H, Tomaru T, Basios V.

Philos Trans A Math Phys Eng Sci. 2018 Nov 12;376(2135). pii: 20170370. doi: 10.1098/rsta.2017.0370.

5.

Effect of post artificial insemination treatment with two different progesterone intravaginal devices on conception and synchronization of the returning estrus in Japanese Black cows.

Yamamoto N, Nishimura R, Gunji Y, Saneshige M, Kiriki K, Hishinuma M.

J Vet Med Sci. 2018 Dec 11;80(12):1822-1828. doi: 10.1292/jvms.17-0094. Epub 2018 Oct 18.

6.

Embryogenic remodeling of global chromatin and its role on structure of corresponding lattice representation.

Gunji YP, Balaz I.

Biosystems. 2018 Nov;173:273-280. doi: 10.1016/j.biosystems.2018.09.013. Epub 2018 Sep 27.

PMID:
30268924
7.

Descending aortic banding for re-rupture of retrograde aortic dissection after emergency thoracic endovascular aortic repair.

Hattori S, Noguchi K, Gunji Y, Nagatsuka M, Yamabe T, Ogino H, Katayama I.

Gen Thorac Cardiovasc Surg. 2018 Sep 22. doi: 10.1007/s11748-018-1016-9. [Epub ahead of print]

PMID:
30244366
8.

Optimal random search using limited spatial memory.

Sakiyama T, Gunji YP.

R Soc Open Sci. 2018 Mar 7;5(3):171057. doi: 10.1098/rsos.171057. eCollection 2018 Mar.

9.

Corrigendum to "Slime mould: The fundamental mechanisms of biological cognition" [BioSystems 165 (2018) 57-70].

Vallverdú J, Castro O, Mayne R, Talanov M, Levin M, Baluška F, Gunji Y, Dussutour A, Zenil H, Adamatzky A.

Biosystems. 2018 Apr;166:66. doi: 10.1016/j.biosystems.2018.02.002. Epub 2018 Feb 24. No abstract available.

PMID:
29486901
10.

Slime mould: The fundamental mechanisms of biological cognition.

Vallverdú J, Castro O, Mayne R, Talanov M, Levin M, Baluška F, Gunji Y, Dussutour A, Zenil H, Adamatzky A.

Biosystems. 2018 Mar;165:57-70. doi: 10.1016/j.biosystems.2017.12.011. Epub 2018 Jan 8. Erratum in: Biosystems. 2018 Feb 24;:.

PMID:
29326068
11.

BNIP3 expression in bovine follicle and corpus luteum.

Nishimura R, Okuda K, Gunji Y, Khalid AM, Yamano Y, Yamashita Y, Hishinuma M.

J Vet Med Sci. 2018 Mar 2;80(2):368-374. doi: 10.1292/jvms.17-0267. Epub 2017 Dec 19.

12.

Modeling of decision-making process for moving straight using inverse Bayesian inference.

Horry Y, Yoshinari A, Nakamoto Y, Gunji YP.

Biosystems. 2018 Jan;163:70-81. doi: 10.1016/j.biosystems.2017.12.006. Epub 2017 Dec 14.

PMID:
29248539
13.

Interaction between path integration and visual orientation during the homing run of fiddler crabs.

Murakami H, Tomaru T, Gunji YP.

R Soc Open Sci. 2017 Sep 20;4(9):170954. doi: 10.1098/rsos.170954. eCollection 2017 Sep.

14.

Reduced microRNA-503 expression augments lung fibroblast VEGF production in chronic obstructive pulmonary disease.

Ikari J, Nelson AJ, Obaid J, Giron-Martinez A, Ikari K, Makino F, Iwasawa S, Gunji Y, Farid M, Wang X, Basma H, Demeo D, Feghali-Bostwick C, Holz O, Rabe K, Liu X, Rennard SI.

PLoS One. 2017 Sep 7;12(9):e0184039. doi: 10.1371/journal.pone.0184039. eCollection 2017.

15.

East-West paths to unconventional computing.

Adamatzky A, Akl S, Burgin M, Calude CS, Costa JF, Dehshibi MM, Gunji YP, Konkoli Z, MacLennan B, Marchal B, Margenstern M, Martínez GJ, Mayne R, Morita K, Schumann A, Sergeyev YD, Sirakoulis GC, Stepney S, Svozil K, Zenil H.

Prog Biophys Mol Biol. 2017 Dec;131:469-493. doi: 10.1016/j.pbiomolbio.2017.08.004. Epub 2017 Aug 14. Review.

PMID:
28818636
16.

Free will in Bayesian and inverse Bayesian inference-driven endo-consciousness.

Gunji YP, Minoura M, Kojima K, Horry Y.

Prog Biophys Mol Biol. 2017 Dec;131:312-324. doi: 10.1016/j.pbiomolbio.2017.06.018. Epub 2017 Jun 27. Review.

PMID:
28663080
17.

Relationships Between Adipokine Profiles, Physique Index, and Severity of Bronchiolitis in Infancy.

Kawamata R, Gunji Y, Ozaki A, Wakabayashi K, Miyajimaa Y, Monden Y, Numazaki K, Takahashi K.

Fetal Pediatr Pathol. 2017 Oct;36(5):347-356. doi: 10.1080/15513815.2017.1332121. Epub 2017 Jun 23.

PMID:
28644757
18.

Emergence of a coherent and cohesive swarm based on mutual anticipation.

Murakami H, Niizato T, Gunji YP.

Sci Rep. 2017 Apr 13;7:46447. doi: 10.1038/srep46447.

19.

Inverse Bayesian inference as a key of consciousness featuring a macroscopic quantum logical structure.

Gunji YP, Shinohara S, Haruna T, Basios V.

Biosystems. 2017 Feb;152:44-65. doi: 10.1016/j.biosystems.2016.12.003. Epub 2016 Dec 29.

PMID:
28041845
20.

Molecular crowding improves bead-based padlock rolling circle amplification.

Sasaki N, Gunji Y, Kase C, Sato K.

Anal Biochem. 2017 Feb 15;519:15-18. doi: 10.1016/j.ab.2016.12.002. Epub 2016 Dec 7.

PMID:
27940012
21.

Emergent weak home-range behaviour without spatial memory.

Sakiyama T, Gunji YP.

R Soc Open Sci. 2016 Jun 29;3(6):160214. doi: 10.1098/rsos.160214. eCollection 2016 Jun.

22.

Effects of Food Texture on Three-Dimensional Loads on Implants During Mastication Based on In Vivo Measurements.

Yoda N, Ogawa T, Gunji Y, Vanegas JR, Kawata T, Sasaki K.

Implant Dent. 2016 Aug;25(4):515-9. doi: 10.1097/ID.0000000000000443.

PMID:
27356200
23.

The Kanizsa triangle illusion in foraging ants.

Sakiyama T, Gunji YP.

Biosystems. 2016 Apr-May;142-143:9-14. doi: 10.1016/j.biosystems.2016.02.003. Epub 2016 Feb 27.

PMID:
26930477
24.

Rotating panoramic view: interaction between visual and olfactory cues in ants.

Minoura M, Sonoda K, Sakiyama T, Gunji YP.

R Soc Open Sci. 2016 Jan 27;3(1):150426. doi: 10.1098/rsos.150426. eCollection 2016 Jan.

25.

Quantum cognition based on an ambiguous representation derived from a rough set approximation.

Gunji YP, Sonoda K, Basios V.

Biosystems. 2016 Mar;141:55-66. doi: 10.1016/j.biosystems.2015.12.003. Epub 2016 Feb 6.

PMID:
26861118
26.

Molecular genetic and cytogenetic analysis of a primary cutaneous CD8-positive aggressive epidermotropic cytotoxic T-cell lymphoma.

Kato K, Oh Y, Takita J, Gunji Y, Kobayashi C, Yoshimi A, Nakao T, Noma M, Koike K, Morimoto A, Iijima S, Hojo H, Tsuchida M.

Int J Hematol. 2016 Feb;103(2):196-201. doi: 10.1007/s12185-015-1895-9. Epub 2015 Dec 16.

PMID:
26676804
27.

Individual classification of ADHD children by right prefrontal hemodynamic responses during a go/no-go task as assessed by fNIRS.

Monden Y, Dan I, Nagashima M, Dan H, Uga M, Ikeda T, Tsuzuki D, Kyutoku Y, Gunji Y, Hirano D, Taniguchi T, Shimoizumi H, Watanabe E, Yamagata T.

Neuroimage Clin. 2015 Jul 9;9:1-12. doi: 10.1016/j.nicl.2015.06.011. eCollection 2015.

28.

Neuropharmacological effect of atomoxetine on attention network in children with attention deficit hyperactivity disorder during oddball paradigms as assessed using functional near-infrared spectroscopy.

Nagashima M, Monden Y, Dan I, Dan H, Mizutani T, Tsuzuki D, Kyutoku Y, Gunji Y, Hirano D, Taniguchi T, Shimoizumi H, Momoi MY, Yamagata T, Watanabe E.

Neurophotonics. 2014 Oct;1(2):025007. doi: 10.1117/1.NPh.1.2.025007. Epub 2014 Oct 1.

29.

Neuropharmacological effect of methylphenidate on attention network in children with attention deficit hyperactivity disorder during oddball paradigms as assessed using functional near-infrared spectroscopy.

Nagashima M, Monden Y, Dan I, Dan H, Tsuzuki D, Mizutani T, Kyutoku Y, Gunji Y, Momoi MY, Watanabe E, Yamagata T.

Neurophotonics. 2014 Jul;1(1):015001. doi: 10.1117/1.NPh.1.1.015001. Epub 2014 May 28.

30.

Inherent noise appears as a Lévy walk in fish schools.

Murakami H, Niizato T, Tomaru T, Nishiyama Y, Gunji YP.

Sci Rep. 2015 Jun 3;5:10605. doi: 10.1038/srep10605.

31.

Ongoing Processes in a Fitness Network Model under Restricted Resources.

Niizato T, Gunji YP.

PLoS One. 2015 May 18;10(5):e0127284. doi: 10.1371/journal.pone.0127284. eCollection 2015.

32.

Effect of culture conditions on microRNA expression in primary adult control and COPD lung fibroblasts in vitro.

Ikari J, Smith LM, Nelson AJ, Iwasawa S, Gunji Y, Farid M, Wang X, Basma H, Feghali-Bostwick C, Liu X, DeMeo DL, Rennard SI.

In Vitro Cell Dev Biol Anim. 2015 Apr;51(4):390-9. doi: 10.1007/s11626-014-9820-8. Epub 2015 Jan 1.

PMID:
25552310
33.

Acute neuropharmacological effects of atomoxetine on inhibitory control in ADHD children: a fNIRS study.

Nagashima M, Monden Y, Dan I, Dan H, Tsuzuki D, Mizutani T, Kyutoku Y, Gunji Y, Hirano D, Taniguchi T, Shimoizumi H, Momoi MY, Watanabe E, Yamagata T.

Neuroimage Clin. 2014 Sep 10;6:192-201. doi: 10.1016/j.nicl.2014.09.001. eCollection 2014.

34.

Biological-data-based finite-element stress analysis of mandibular bone with implant-supported overdenture.

Shigemitsu R, Yoda N, Ogawa T, Kawata T, Gunji Y, Yamakawa Y, Ikeda K, Sasaki K.

Comput Biol Med. 2014 Nov;54:44-52. doi: 10.1016/j.compbiomed.2014.08.018. Epub 2014 Aug 28.

PMID:
25212117
35.

An emergence of formal logic induced by an internal agent.

Sawa K, Gunji YP.

Biosystems. 2014 Oct;124:39-45. doi: 10.1016/j.biosystems.2014.08.005. Epub 2014 Sep 2.

PMID:
25192684
36.

Fibroblasts that resist cigarette smoke-induced senescence acquire profibrotic phenotypes.

Kanaji N, Basma H, Nelson A, Farid M, Sato T, Nakanishi M, Wang X, Michalski J, Li Y, Gunji Y, Feghali-Bostwick C, Liu X, Rennard SI.

Am J Physiol Lung Cell Mol Physiol. 2014 Sep 1;307(5):L364-73. doi: 10.1152/ajplung.00041.2014. Epub 2014 Jul 11.

37.

Punctuated equilibrium based on a locally ambiguous niche.

Gunji YP, Sakiyama T, Murakami H.

Biosystems. 2014 Sep;123:99-105. doi: 10.1016/j.biosystems.2014.05.005. Epub 2014 Jun 4.

PMID:
24905426
38.

Emergent runaway into an avoidance area in a swarm of soldier crabs.

Murakami H, Tomaru T, Nishiyama Y, Moriyama T, Niizato T, Gunji YP.

PLoS One. 2014 May 19;9(5):e97870. doi: 10.1371/journal.pone.0097870. eCollection 2014.

39.

Emergence of the scale-invariant proportion in a flock from the metric-topological interaction.

Niizato T, Murakami H, Gunji YP.

Biosystems. 2014 May;119:62-8. doi: 10.1016/j.biosystems.2014.03.001. Epub 2014 Mar 28.

PMID:
24686118
40.

Kanizsa illusory contours appearing in the plasmodium pattern of Physarum polycephalum.

Tani I, Yamachiyo M, Shirakawa T, Gunji YP.

Front Cell Infect Microbiol. 2014 Feb 28;4:10. doi: 10.3389/fcimb.2014.00010. eCollection 2014.

41.

Persistent fever and weight loss due to an interleukin-6-producing adrenocortical oncocytoma in a girl--review of the literature.

Kawahara Y, Morimoto A, Onoue A, Kashii Y, Fukushima N, Gunji Y.

Eur J Pediatr. 2014 Aug;173(8):1107-10. doi: 10.1007/s00431-014-2292-8. Epub 2014 Mar 8. Review.

PMID:
24610396
42.

Reprogramming of COPD lung fibroblasts through formation of induced pluripotent stem cells.

Basma H, Gunji Y, Iwasawa S, Nelson A, Farid M, Ikari J, Liu X, Wang X, Michalski J, Smith L, Iqbal J, El Behery R, West W, Yelamanchili S, Rennard D, Holz O, Mueller KC, Magnussen H, Rabe K, Castaldi PJ, Rennard SI.

Am J Physiol Lung Cell Mol Physiol. 2014 Mar 15;306(6):L552-65. doi: 10.1152/ajplung.00255.2013. Epub 2014 Jan 31.

43.

Protein kinase C (PKC) increases TACE/ADAM17 enzyme activity in porcine ovarian somatic cells, which is essential for granulosa cell luteinization and oocyte maturation.

Yamashita Y, Okamoto M, Ikeda M, Okamoto A, Sakai M, Gunji Y, Nishimura R, Hishinuma M, Shimada M.

Endocrinology. 2014 Mar;155(3):1080-90. doi: 10.1210/en.2013-1655. Epub 2014 Jan 1.

PMID:
24424050
44.

Characterization of pulmonary cysts in Birt-Hogg-Dubé syndrome: histopathological and morphometric analysis of 229 pulmonary cysts from 50 unrelated patients.

Kumasaka T, Hayashi T, Mitani K, Kataoka H, Kikkawa M, Tobino K, Kobayashi E, Gunji Y, Kunogi M, Kurihara M, Seyama K.

Histopathology. 2014 Jul;65(1):100-10. doi: 10.1111/his.12368. Epub 2014 Mar 4.

45.

The Müller-Lyer illusion in ant foraging.

Sakiyama T, Gunji YP.

PLoS One. 2013 Dec 11;8(12):e81714. doi: 10.1371/journal.pone.0081714. eCollection 2013.

46.

Awareness as observational heterarchy.

Sonoda K, Kodama K, Gunji YP.

Front Psychol. 2013 Oct 1;4:686. doi: 10.3389/fpsyg.2013.00686. eCollection 2013.

47.

Vitamin D modulates prostaglandin E2 synthesis and degradation in human lung fibroblasts.

Liu X, Nelson A, Wang X, Farid M, Gunji Y, Ikari J, Iwasawa S, Basma H, Feghali-Bostwick C, Rennard SI.

Am J Respir Cell Mol Biol. 2014 Jan;50(1):40-50. doi: 10.1165/rcmb.2013-0211OC.

PMID:
23941558
48.

Emergence of an optimal search strategy from a simple random walk.

Sakiyama T, Gunji YP.

J R Soc Interface. 2013 Jun 26;10(86):20130486. doi: 10.1098/rsif.2013.0486. Print 2013 Sep 6.

49.

Phosphodiesterase-4 inhibition augments human lung fibroblast vascular endothelial growth factor production induced by prostaglandin E2.

Ikari J, Michalski JM, Iwasawa S, Gunji Y, Nogel S, Park JH, Nelson AJ, Farid M, Wang X, Schulte N, Basma H, Toews ML, Feghali-Bostwick C, Tenor H, Liu X, Rennard SI.

Am J Respir Cell Mol Biol. 2013 Oct;49(4):571-81. doi: 10.1165/rcmb.2013-0004OC.

PMID:
23656623
50.

Smad3 mediates cigarette smoke extract (CSE) induction of VEGF release by human fetal lung fibroblasts.

Farid M, Kanaji N, Nakanishi M, Gunji Y, Michalski J, Iwasawa S, Ikari J, Wang X, Basma H, Nelson AJ, Liu X, Rennard SI.

Toxicol Lett. 2013 Jul 4;220(2):126-34. doi: 10.1016/j.toxlet.2013.04.011. Epub 2013 Apr 22.

PMID:
23618901

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