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Items: 1 to 50 of 80

1.

Assessing lesion malignancy by scanning small-angle X-ray scattering of breast tissue with microcalcifications.

Arboleda C, Lütz-Bueno V, Wang Z, Villanueva-Perez P, Guizar-Sicairos M, Liebi M, Varga Z, Stampanoni MFM.

Phys Med Biol. 2019 Jun 24. doi: 10.1088/1361-6560/ab2c36. [Epub ahead of print]

PMID:
31234149
2.

Ab initio nonrigid X-ray nanotomography.

Odstrcil M, Holler M, Raabe J, Sepe A, Sheng X, Vignolini S, Schroer CG, Guizar-Sicairos M.

Nat Commun. 2019 Jun 13;10(1):2600. doi: 10.1038/s41467-019-10670-7.

3.

Towards optimized illumination for high-resolution ptychography.

Odstrčil M, Lebugle M, Guizar-Sicairos M, David C, Holler M.

Opt Express. 2019 May 13;27(10):14981-14997. doi: 10.1364/OE.27.014981.

PMID:
31163938
4.

Gridrec-MS: an algorithm for multi-slice tomography.

Tsai EHR, Marone F, Guizar-Sicairos M.

Opt Lett. 2019 May 1;44(9):2181-2184. doi: 10.1364/OL.44.002181.

PMID:
31042178
5.

High-speed tensor tomography: iterative reconstruction tensor tomography (IRTT) algorithm.

Gao Z, Guizar-Sicairos M, Lutz-Bueno V, Schröter A, Liebi M, Rudin M, Georgiadis M.

Acta Crystallogr A Found Adv. 2019 Mar 1;75(Pt 2):223-238. doi: 10.1107/S2053273318017394. Epub 2019 Feb 6.

6.

X-ray Fourier ptychography.

Wakonig K, Diaz A, Bonnin A, Stampanoni M, Bergamaschi A, Ihli J, Guizar-Sicairos M, Menzel A.

Sci Adv. 2019 Feb 1;5(2):eaav0282. doi: 10.1126/sciadv.aav0282. eCollection 2019 Feb.

7.

Correlated X-Ray 3D Ptychography and Diffraction Microscopy Visualize Links between Morphology and Crystal Structure of Lithium-Rich Cathode Materials.

Tsai EHR, Billaud J, Sanchez DF, Ihli J, Odstrčil M, Holler M, Grolimund D, Villevieille C, Guizar-Sicairos M.

iScience. 2019 Jan 25;11:356-365. doi: 10.1016/j.isci.2018.12.028. Epub 2018 Dec 31.

8.

Model-free classification of X-ray scattering signals applied to image segmentation.

Lutz-Bueno V, Arboleda C, Leu L, Blunt MJ, Busch A, Georgiadis A, Bertier P, Schmatz J, Varga Z, Villanueva-Perez P, Wang Z, Lebugle M, David C, Stampanoni M, Diaz A, Guizar-Sicairos M, Menzel A.

J Appl Crystallogr. 2018 Sep 10;51(Pt 5):1378-1386. doi: 10.1107/S1600576718011032. eCollection 2018 Oct 1.

9.

Ptychographic X-ray CT characterization of the osteocyte lacuno-canalicular network in a male rat's glucocorticoid induced osteoporosis model.

Ciani A, Toumi H, Pallu S, Tsai EHR, Diaz A, Guizar-Sicairos M, Holler M, Lespessailles E, Kewish CM.

Bone Rep. 2018 Jul 29;9:122-131. doi: 10.1016/j.bonr.2018.07.005. eCollection 2018 Dec.

10.

Quantitative region-of-interest tomography using variable field of view.

da Silva JC, Guizar-Sicairos M, Holler M, Diaz A, van Bokhoven JA, Bunk O, Menzel A.

Opt Express. 2018 Jun 25;26(13):16752-16768. doi: 10.1364/OE.26.016752.

PMID:
30119497
11.

Arbitrary-path fly-scan ptychography.

Odstrčil M, Holler M, Guizar-Sicairos M.

Opt Express. 2018 May 14;26(10):12585-12593. doi: 10.1364/OE.26.012585.

PMID:
29801297
12.

OMNY-A tOMography Nano crYo stage.

Holler M, Raabe J, Diaz A, Guizar-Sicairos M, Wepf R, Odstrcil M, Shaik FR, Panneels V, Menzel A, Sarafimov B, Maag S, Wang X, Thominet V, Walther H, Lachat T, Vitins M, Bunk O.

Rev Sci Instrum. 2018 Apr;89(4):043706. doi: 10.1063/1.5020247.

PMID:
29716370
13.

Iterative least-squares solver for generalized maximum-likelihood ptychography.

Odstrčil M, Menzel A, Guizar-Sicairos M.

Opt Express. 2018 Feb 5;26(3):3108-3123. doi: 10.1364/OE.26.003108.

PMID:
29401843
14.

The compositional and nano-structural basis of fracture healing in healthy and osteoporotic bone.

Mathavan N, Turunen MJ, Guizar-Sicairos M, Bech M, Schaff F, Tägil M, Isaksson H.

Sci Rep. 2018 Jan 25;8(1):1591. doi: 10.1038/s41598-018-19296-z.

15.

Small-angle X-ray scattering tensor tomography: model of the three-dimensional reciprocal-space map, reconstruction algorithm and angular sampling requirements.

Liebi M, Georgiadis M, Kohlbrecher J, Holler M, Raabe J, Usov I, Menzel A, Schneider P, Bunk O, Guizar-Sicairos M.

Acta Crystallogr A Found Adv. 2018 Jan 1;74(Pt 1):12-24. doi: 10.1107/S205327331701614X. Epub 2018 Jan 1.

16.

Live cell X-ray imaging of autophagic vacuoles formation and chromatin dynamics in fission yeast.

Strelnikova N, Sauter N, Guizar-Sicairos M, Göllner M, Diaz A, Delivani P, Chacón M, Tolić IM, Zaburdaev V, Pfohl T.

Sci Rep. 2017 Oct 23;7(1):13775. doi: 10.1038/s41598-017-13175-9.

17.

High-acceptance versatile microfocus module based on elliptical Fresnel zone plates for small-angle X-ray scattering.

Lebugle M, Liebi M, Wakonig K, Guzenko VA, Holler M, Menzel A, Guizar-Sicairos M, Diaz A, David C.

Opt Express. 2017 Sep 4;25(18):21145-21158. doi: 10.1364/OE.25.021145.

PMID:
29041521
18.

Achilles tendon compositional and structural properties are altered after unloading by botox.

Khayyeri H, Blomgran P, Hammerman M, Turunen MJ, Löwgren A, Guizar-Sicairos M, Aspenberg P, Isaksson H.

Sci Rep. 2017 Oct 12;7(1):13067. doi: 10.1038/s41598-017-13107-7.

19.

A three-dimensional view of structural changes caused by deactivation of fluid catalytic cracking catalysts.

Ihli J, Jacob RR, Holler M, Guizar-Sicairos M, Diaz A, da Silva JC, Ferreira Sanchez D, Krumeich F, Grolimund D, Taddei M, Cheng W-, Shu Y, Menzel A, van Bokhoven JA.

Nat Commun. 2017 Oct 9;8(1):809. doi: 10.1038/s41467-017-00789-w.

20.

Effects of tissue fixation and dehydration on tendon collagen nanostructure.

Turunen MJ, Khayyeri H, Guizar-Sicairos M, Isaksson H.

J Struct Biol. 2017 Sep;199(3):209-215. doi: 10.1016/j.jsb.2017.07.009. Epub 2017 Jul 28.

PMID:
28760694
21.

Three-Dimensional Imaging of Biological Tissue by Cryo X-Ray Ptychography.

Shahmoradian SH, Tsai EHR, Diaz A, Guizar-Sicairos M, Raabe J, Spycher L, Britschgi M, Ruf A, Stahlberg H, Holler M.

Sci Rep. 2017 Jul 24;7(1):6291. doi: 10.1038/s41598-017-05587-4.

22.

Three-dimensional magnetization structures revealed with X-ray vector nanotomography.

Donnelly C, Guizar-Sicairos M, Scagnoli V, Gliga S, Holler M, Raabe J, Heyderman LJ.

Nature. 2017 Jul 19;547(7663):328-331. doi: 10.1038/nature23006.

PMID:
28726832
23.

Evolutionary-Optimized Photonic Network Structure in White Beetle Wing Scales.

Wilts BD, Sheng X, Holler M, Diaz A, Guizar-Sicairos M, Raabe J, Hoppe R, Liu SH, Langford R, Onelli OD, Chen D, Torquato S, Steiner U, Schroer CG, Vignolini S, Sepe A.

Adv Mater. 2018 May;30(19):e1702057. doi: 10.1002/adma.201702057. Epub 2017 Jun 22.

PMID:
28640543
24.

High-resolution non-destructive three-dimensional imaging of integrated circuits.

Holler M, Guizar-Sicairos M, Tsai EH, Dinapoli R, Müller E, Bunk O, Raabe J, Aeppli G.

Nature. 2017 Mar 15;543(7645):402-406. doi: 10.1038/nature21698.

PMID:
28300088
25.

X-ray ptychography with extended depth of field.

Tsai EH, Usov I, Diaz A, Menzel A, Guizar-Sicairos M.

Opt Express. 2016 Dec 12;24(25):29089-29108. doi: 10.1364/OE.24.029089.

PMID:
27958573
26.

Phase retrieval by coherent modulation imaging.

Zhang F, Chen B, Morrison GR, Vila-Comamala J, Guizar-Sicairos M, Robinson IK.

Nat Commun. 2016 Nov 18;7:13367. doi: 10.1038/ncomms13367.

27.

Advanced glycation end-products: Mechanics of aged collagen from molecule to tissue.

Gautieri A, Passini FS, Silván U, Guizar-Sicairos M, Carimati G, Volpi P, Moretti M, Schoenhuber H, Redaelli A, Berli M, Snedeker JG.

Matrix Biol. 2017 May;59:95-108. doi: 10.1016/j.matbio.2016.09.001. Epub 2016 Sep 9.

PMID:
27616134
28.

Ultrastructure Organization of Human Trabeculae Assessed by 3D sSAXS and Relation to Bone Microarchitecture.

Georgiadis M, Guizar-Sicairos M, Gschwend O, Hangartner P, Bunk O, Müller R, Schneider P.

PLoS One. 2016 Aug 22;11(8):e0159838. doi: 10.1371/journal.pone.0159838. eCollection 2016.

29.

Bone mineral crystal size and organization vary across mature rat bone cortex.

Turunen MJ, Kaspersen JD, Olsson U, Guizar-Sicairos M, Bech M, Schaff F, Tägil M, Jurvelin JS, Isaksson H.

J Struct Biol. 2016 Sep;195(3):337-344. doi: 10.1016/j.jsb.2016.07.005. Epub 2016 Jul 11.

30.

X-Ray Nanoscopy of a Bulk Heterojunction.

Patil N, Skjønsfjell ET, Van den Brande N, Chavez Panduro EA, Claessens R, Guizar-Sicairos M, Van Mele B, Breiby DW.

PLoS One. 2016 Jul 1;11(7):e0158345. doi: 10.1371/journal.pone.0158345. eCollection 2016.

31.

X-ray ptychography using a distant analyzer.

Tsai EH, Diaz A, Menzel A, Guizar-Sicairos M.

Opt Express. 2016 Mar 21;24(6):6441-50. doi: 10.1364/OE.24.006441.

PMID:
27136835
32.

Signal-to-noise criterion for free-propagation imaging techniques at free-electron lasers and synchrotrons.

Villanueva-Perez P, Pedrini B, Mokso R, Guizar-Sicairos M, Arcadu F, Stampanoni M.

Opt Express. 2016 Feb 22;24(4):3189-201. doi: 10.1364/OE.24.003189.

PMID:
26906983
33.

Zernike x-ray ptychography.

Vartiainen I, Mohacsi I, Stachnik K, Guizar-Sicairos M, David C, Meents A.

Opt Lett. 2016 Feb 15;41(4):721-4. doi: 10.1364/OL.41.000721.

PMID:
26872172
34.

Internal structure of sponge glass fiber revealed by ptychographic nanotomography.

Birkbak ME, Guizar-Sicairos M, Holler M, Birkedal H.

J Struct Biol. 2016 Apr;194(1):124-8. doi: 10.1016/j.jsb.2016.02.006. Epub 2016 Feb 4.

PMID:
26853498
35.

Fabrication and characterization of high-efficiency double-sided blazed x-ray optics.

Mohacsi I, Vartiainen I, Guizar-Sicairos M, Karvinen P, Guzenko VA, Müller E, Kewish CM, Somogyi A, David C.

Opt Lett. 2016 Jan 15;41(2):281-4. doi: 10.1364/OL.41.000281.

PMID:
26766694
36.

Six-dimensional real and reciprocal space small-angle X-ray scattering tomography.

Schaff F, Bech M, Zaslansky P, Jud C, Liebi M, Guizar-Sicairos M, Pfeiffer F.

Nature. 2015 Nov 19;527(7578):353-6. doi: 10.1038/nature16060.

PMID:
26581292
37.

Nanostructure surveys of macroscopic specimens by small-angle scattering tensor tomography.

Liebi M, Georgiadis M, Menzel A, Schneider P, Kohlbrecher J, Bunk O, Guizar-Sicairos M.

Nature. 2015 Nov 19;527(7578):349-52. doi: 10.1038/nature16056.

PMID:
26581291
38.

Three-dimensional mass density mapping of cellular ultrastructure by ptychographic X-ray nanotomography.

Diaz A, Malkova B, Holler M, Guizar-Sicairos M, Lima E, Panneels V, Pigino G, Bittermann AG, Wettstein L, Tomizaki T, Bunk O, Schertler G, Ishikawa T, Wepf R, Menzel A.

J Struct Biol. 2015 Dec;192(3):461-469. doi: 10.1016/j.jsb.2015.10.008. Epub 2015 Oct 22. Erratum in: J Struct Biol. 2016 Jan;193(1):83.

39.

Characterization of x-ray phase vortices by ptychographic coherent diffractive imaging.

Vila-Comamala J, Sakdinawat A, Guizar-Sicairos M.

Opt Lett. 2014 Sep 15;39(18):5281-4. doi: 10.1364/OL.39.005281.

PMID:
26466251
40.

Improving organic tandem solar cells based on water-processed nanoparticles by quantitative 3D nanoimaging.

Pedersen EB, Angmo D, Dam HF, Thydén KT, Andersen TR, Skjønsfjell ET, Krebs FC, Holler M, Diaz A, Guizar-Sicairos M, Breiby DW, Andreasen JW.

Nanoscale. 2015 Aug 28;7(32):13765-74. doi: 10.1039/c5nr02824h. Epub 2015 Jul 29.

PMID:
26220159
41.

Assessment of the 3 D Pore Structure and Individual Components of Preshaped Catalyst Bodies by X-Ray Imaging.

da Silva JC, Mader K, Holler M, Haberthür D, Diaz A, Guizar-Sicairos M, Cheng WC, Shu Y, Raabe J, Menzel A, van Bokhoven JA.

ChemCatChem. 2015 Feb;7(3):413-416. Epub 2014 Dec 17.

42.

Critical appraisal of tubular putative eumetazoans from the Ediacaran Weng'an Doushantuo biota.

Cunningham JA, Vargas K, Pengju L, Belivanova V, Marone F, Martínez-Pérez C, Guizar-Sicairos M, Holler M, Bengtson S, Donoghue PC.

Proc Biol Sci. 2015 Aug 7;282(1812):20151169. doi: 10.1098/rspb.2015.1169.

43.

Element-specific X-ray phase tomography of 3D structures at the nanoscale.

Donnelly C, Guizar-Sicairos M, Scagnoli V, Holler M, Huthwelker T, Menzel A, Vartiainen I, Müller E, Kirk E, Gliga S, Raabe J, Heyderman LJ.

Phys Rev Lett. 2015 Mar 20;114(11):115501. Epub 2015 Mar 16.

PMID:
25839287
44.

High resolution double-sided diffractive optics for hard X-ray microscopy.

Mohacsi I, Vartiainen I, Guizar-Sicairos M, Karvinen P, Guzenko VA, Müller E, Färm E, Ritala M, Kewish CM, Somogyi A, David C.

Opt Express. 2015 Jan 26;23(2):776-86. doi: 10.1364/OE.23.000776.

PMID:
25835837
45.

Mass density and water content of saturated never-dried calcium silicate hydrates.

da Silva JC, Trtik P, Diaz A, Holler M, Guizar-Sicairos M, Raabe J, Bunk O, Menzel A.

Langmuir. 2015 Apr 7;31(13):3779-83. doi: 10.1021/la504478j. Epub 2015 Mar 26.

46.

Ptychographic X-ray nanotomography quantifies mineral distributions in human dentine.

Zanette I, Enders B, Dierolf M, Thibault P, Gradl R, Diaz A, Guizar-Sicairos M, Menzel A, Pfeiffer F, Zaslansky P.

Sci Rep. 2015 Mar 20;5:9210. doi: 10.1038/srep09210.

47.

Coherent imaging at the diffraction limit. Erratum.

Thibault P, Guizar-Sicairos M, Menzel A.

J Synchrotron Radiat. 2015 Mar;22(2):469. doi: 10.1107/S1600577515001575. Epub 2015 Feb 27. No abstract available.

48.

Advanced glycation end-products reduce collagen molecular sliding to affect collagen fibril damage mechanisms but not stiffness.

Fessel G, Li Y, Diederich V, Guizar-Sicairos M, Schneider P, Sell DR, Monnier VM, Snedeker JG.

PLoS One. 2014 Nov 3;9(11):e110948. doi: 10.1371/journal.pone.0110948. eCollection 2014.

49.

3D scanning SAXS: a novel method for the assessment of bone ultrastructure orientation.

Georgiadis M, Guizar-Sicairos M, Zwahlen A, Trüssel AJ, Bunk O, Müller R, Schneider P.

Bone. 2015 Feb;71:42-52. doi: 10.1016/j.bone.2014.10.002. Epub 2014 Oct 13.

PMID:
25306893
50.

Coherent imaging at the diffraction limit.

Thibault P, Guizar-Sicairos M, Menzel A.

J Synchrotron Radiat. 2014 Sep;21(Pt 5):1011-8. doi: 10.1107/S1600577514015343. Epub 2014 Aug 27. Erratum in: J Synchrotron Radiat. 2015 Mar;22(Pt 2):469.

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