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Swimming motility of a gut bacterial symbiont promotes resistance to intestinal expulsion and enhances inflammation.

Wiles TJ, Schlomann BH, Wall ES, Betancourt R, Parthasarathy R, Guillemin K.

PLoS Biol. 2020 Mar 20;18(3):e3000661. doi: 10.1371/journal.pbio.3000661. eCollection 2020 Mar.


Patterns of partnership: surveillance and mimicry in host-microbiota mutualisms.

Wiles TJ, Guillemin K.

Curr Opin Microbiol. 2020 Feb 12;54:87-94. doi: 10.1016/j.mib.2020.01.012. [Epub ahead of print] Review.


Editorial overview: Frontiers in microbiome studies: viewing vast vistas with roadmap in hand.

Guillemin K, Segre JA.

Curr Opin Microbiol. 2019 Aug;50:iii-iv. doi: 10.1016/j.mib.2019.11.003. No abstract available.


Packing in the Proteins.

Massaquoi MS, Guillemin K.

Dev Cell. 2019 Oct 7;51(1):1-2. doi: 10.1016/j.devcel.2019.09.013.


Sublethal antibiotics collapse gut bacterial populations by enhancing aggregation and expulsion.

Schlomann BH, Wiles TJ, Wall ES, Guillemin K, Parthasarathy R.

Proc Natl Acad Sci U S A. 2019 Oct 22;116(43):21392-21400. doi: 10.1073/pnas.1907567116. Epub 2019 Oct 7.


Helicobacter pylori senses bleach (HOCl) as a chemoattractant using a cytosolic chemoreceptor.

Perkins A, Tudorica DA, Amieva MR, Remington SJ, Guillemin K.

PLoS Biol. 2019 Aug 29;17(8):e3000395. doi: 10.1371/journal.pbio.3000395. eCollection 2019 Aug.


Bacteria evoke alarm behaviour in zebrafish.

Chia JSM, Wall ES, Wee CL, Rowland TAJ, Cheng RK, Cheow K, Guillemin K, Jesuthasan S.

Nat Commun. 2019 Aug 23;10(1):3831. doi: 10.1038/s41467-019-11608-9.


Agent-Based Modeling Demonstrates How Local Chemotactic Behavior Can Shape Biofilm Architecture.

Sweeney EG, Nishida A, Weston A, Bañuelos MS, Potter K, Conery J, Guillemin K.

mSphere. 2019 May 29;4(3). pii: e00285-19. doi: 10.1128/mSphere.00285-19.


Multidisciplinarity in Microbiome Research: A Challenge and Opportunity to Rethink Causation, Variability, and Scale.

Amato KR, Maurice CF, Guillemin K, Giles-Vernick T.

Bioessays. 2019 Oct;41(10):e1900007. doi: 10.1002/bies.201900007. Epub 2019 May 17. Review.


Evolutionary "Experiments" in Symbiosis: The Study of Model Animals Provides Insights into the Mechanisms Underlying the Diversity of Host-Microbe Interactions.

Bosch TCG, Guillemin K, McFall-Ngai M.

Bioessays. 2019 Oct;41(10):e1800256. doi: 10.1002/bies.201800256. Epub 2019 May 17. Review.


The Other Side of the Coin: What Beneficial Microbes Can Teach Us about Pathogenic Potential.

Wiles TJ, Guillemin K.

J Mol Biol. 2019 Jul 26;431(16):2946-2956. doi: 10.1016/j.jmb.2019.05.001. Epub 2019 May 9. Review.


Ontogeny of alkaline phosphatase activity in infant intestines and breast milk.

Yang Y, Rader E, Peters-Carr M, Bent RC, Smilowitz JT, Guillemin K, Rader B.

BMC Pediatr. 2019 Jan 3;19(1):2. doi: 10.1186/s12887-018-1379-1.


Reports from a Healthy Community: The 7th Conference on Beneficial Microbes.

Mandel MJ, Broderick NA, Martens EC, Guillemin K.

Appl Environ Microbiol. 2018 Dec 21. pii: AEM.02562-18. doi: 10.1128/AEM.02562-18. [Epub ahead of print] Review.


Evolving in a Microbial Soup: You Are What They Eat.

Massaquoi MS, Guillemin K.

Dev Cell. 2018 Dec 17;47(6):682-683. doi: 10.1016/j.devcel.2018.11.045.


Experimental bacterial adaptation to the zebrafish gut reveals a primary role for immigration.

Robinson CD, Klein HS, Murphy KD, Parthasarathy R, Guillemin K, Bohannan BJM.

PLoS Biol. 2018 Dec 10;16(12):e2006893. doi: 10.1371/journal.pbio.2006893. eCollection 2018 Dec.


Bacterial Cohesion Predicts Spatial Distribution in the Larval Zebrafish Intestine.

Schlomann BH, Wiles TJ, Wall ES, Guillemin K, Parthasarathy R.

Biophys J. 2018 Dec 4;115(11):2271-2277. doi: 10.1016/j.bpj.2018.10.017. Epub 2018 Oct 30.


A bacterial immunomodulatory protein with lipocalin-like domains facilitates host-bacteria mutualism in larval zebrafish.

Rolig AS, Sweeney EG, Kaye LE, DeSantis MD, Perkins A, Banse AV, Hamilton MK, Guillemin K.

Elife. 2018 Nov 6;7. pii: e37172. doi: 10.7554/eLife.37172.


Modernized Tools for Streamlined Genetic Manipulation and Comparative Study of Wild and Diverse Proteobacterial Lineages.

Wiles TJ, Wall ES, Schlomann BH, Hay EA, Parthasarathy R, Guillemin K.

mBio. 2018 Oct 9;9(5). pii: e01877-18. doi: 10.1128/mBio.01877-18.


Structures of the ligand-binding domain of Helicobacter pylori chemoreceptor TlpA.

Sweeney EG, Perkins A, Kallio K, James Remington S, Guillemin K.

Protein Sci. 2018 Nov;27(11):1961-1968. doi: 10.1002/pro.3503.


Market Integration Predicts Human Gut Microbiome Attributes across a Gradient of Economic Development.

Stagaman K, Cepon-Robins TJ, Liebert MA, Gildner TE, Urlacher SS, Madimenos FC, Guillemin K, Snodgrass JJ, Sugiyama LS, Bohannan BJM.

mSystems. 2018 Feb 27;3(1). pii: e00122-17. doi: 10.1128/mSystems.00122-17. eCollection 2018 Jan-Feb.


Microbiota promote secretory cell determination in the intestinal epithelium by modulating host Notch signaling.

Troll JV, Hamilton MK, Abel ML, Ganz J, Bates JM, Stephens WZ, Melancon E, van der Vaart M, Meijer AH, Distel M, Eisen JS, Guillemin K.

Development. 2018 Feb 23;145(4). pii: dev155317. doi: 10.1242/dev.155317.


The bacterial virulence factor CagA induces microbial dysbiosis that contributes to excessive epithelial cell proliferation in the Drosophila gut.

Jones TA, Hernandez DZ, Wong ZC, Wandler AM, Guillemin K.

PLoS Pathog. 2017 Oct 19;13(10):e1006631. doi: 10.1371/journal.ppat.1006631. eCollection 2017 Oct.


Transmission of a common intestinal neoplasm in zebrafish by cohabitation.

Burns AR, Watral V, Sichel S, Spagnoli S, Banse AV, Mittge E, Sharpton TJ, Guillemin K, Kent ML.

J Fish Dis. 2018 Apr;41(4):569-579. doi: 10.1111/jfd.12743. Epub 2017 Oct 11.


Interhost dispersal alters microbiome assembly and can overwhelm host innate immunity in an experimental zebrafish model.

Burns AR, Miller E, Agarwal M, Rolig AS, Milligan-Myhre K, Seredick S, Guillemin K, Bohannan BJM.

Proc Natl Acad Sci U S A. 2017 Oct 17;114(42):11181-11186. doi: 10.1073/pnas.1702511114. Epub 2017 Oct 2.


The scales of the zebrafish: host-microbiota interactions from proteins to populations.

Burns AR, Guillemin K.

Curr Opin Microbiol. 2017 Aug;38:137-141. doi: 10.1016/j.mib.2017.05.011. Epub 2017 Jun 12. Review.


Host Genotype and Microbiota Contribute Asymmetrically to Transcriptional Variation in the Threespine Stickleback Gut.

Small CM, Milligan-Myhre K, Bassham S, Guillemin K, Cresko WA.

Genome Biol Evol. 2017 Mar 1;9(3):504-520. doi: 10.1093/gbe/evx014.


The role of adaptive immunity as an ecological filter on the gut microbiota in zebrafish.

Stagaman K, Burns AR, Guillemin K, Bohannan BJ.

ISME J. 2017 Jul;11(7):1630-1639. doi: 10.1038/ismej.2017.28. Epub 2017 Mar 17.


The enteric nervous system promotes intestinal health by constraining microbiota composition.

Rolig AS, Mittge EK, Ganz J, Troll JV, Melancon E, Wiles TJ, Alligood K, Stephens WZ, Eisen JS, Guillemin K.

PLoS Biol. 2017 Feb 16;15(2):e2000689. doi: 10.1371/journal.pbio.2000689. eCollection 2017 Feb.


Best practices for germ-free derivation and gnotobiotic zebrafish husbandry.

Melancon E, Gomez De La Torre Canny S, Sichel S, Kelly M, Wiles TJ, Rawls JF, Eisen JS, Guillemin K.

Methods Cell Biol. 2017;138:61-100. doi: 10.1016/bs.mcb.2016.11.005. Review.


Multiple Acid Sensors Control Helicobacter pylori Colonization of the Stomach.

Huang JY, Goers Sweeney E, Guillemin K, Amieva MR.

PLoS Pathog. 2017 Jan 19;13(1):e1006118. doi: 10.1371/journal.ppat.1006118. eCollection 2017 Jan.


A conserved bacterial protein induces pancreatic beta cell expansion during zebrafish development.

Hill JH, Franzosa EA, Huttenhower C, Guillemin K.

Elife. 2016 Dec 13;5. pii: e20145. doi: 10.7554/eLife.20145.


Host Gut Motility Promotes Competitive Exclusion within a Model Intestinal Microbiota.

Wiles TJ, Jemielita M, Baker RP, Schlomann BH, Logan SL, Ganz J, Melancon E, Eisen JS, Guillemin K, Parthasarathy R.

PLoS Biol. 2016 Jul 26;14(7):e1002517. doi: 10.1371/journal.pbio.1002517. eCollection 2016 Jul.


H. pylori's BabA Embraces Change.

Sweeney EG, Guillemin K.

Cell Host Microbe. 2016 Jan 13;19(1):5-7. doi: 10.1016/j.chom.2015.12.013.


Innate immune responses to gut microbiota differ between oceanic and freshwater threespine stickleback populations.

Milligan-Myhre K, Small CM, Mittge EK, Agarwal M, Currey M, Cresko WA, Guillemin K.

Dis Model Mech. 2016 Feb;9(2):187-98. doi: 10.1242/dmm.021881. Epub 2015 Dec 17.


Individual Members of the Microbiota Disproportionately Modulate Host Innate Immune Responses.

Rolig AS, Parthasarathy R, Burns AR, Bohannan BJ, Guillemin K.

Cell Host Microbe. 2015 Nov 11;18(5):613-20. doi: 10.1016/j.chom.2015.10.009.


Identification of Population Bottlenecks and Colonization Factors during Assembly of Bacterial Communities within the Zebrafish Intestine.

Stephens WZ, Wiles TJ, Martinez ES, Jemielita M, Burns AR, Parthasarathy R, Bohannan BJ, Guillemin K.

mBio. 2015 Oct 27;6(6):e01163-15. doi: 10.1128/mBio.01163-15.


Ontogenetic Differences in Dietary Fat Influence Microbiota Assembly in the Zebrafish Gut.

Wong S, Stephens WZ, Burns AR, Stagaman K, David LA, Bohannan BJ, Guillemin K, Rawls JF.

mBio. 2015 Sep 29;6(5):e00687-15. doi: 10.1128/mBio.00687-15.


The composition of the zebrafish intestinal microbial community varies across development.

Stephens WZ, Burns AR, Stagaman K, Wong S, Rawls JF, Guillemin K, Bohannan BJ.

ISME J. 2016 Mar;10(3):644-54. doi: 10.1038/ismej.2015.140. Epub 2015 Sep 4.


Contribution of neutral processes to the assembly of gut microbial communities in the zebrafish over host development.

Burns AR, Stephens WZ, Stagaman K, Wong S, Rawls JF, Guillemin K, Bohannan BJ.

ISME J. 2016 Mar;10(3):655-64. doi: 10.1038/ismej.2015.142. Epub 2015 Aug 21.


Chemodetection and Destruction of Host Urea Allows Helicobacter pylori to Locate the Epithelium.

Huang JY, Sweeney EG, Sigal M, Zhang HC, Remington SJ, Cantrell MA, Kuo CJ, Guillemin K, Amieva MR.

Cell Host Microbe. 2015 Aug 12;18(2):147-56. doi: 10.1016/j.chom.2015.07.002.


Chemorepulsion from the Quorum Signal Autoinducer-2 Promotes Helicobacter pylori Biofilm Dispersal.

Anderson JK, Huang JY, Wreden C, Sweeney EG, Goers J, Remington SJ, Guillemin K.

mBio. 2015 Jul 7;6(4):e00379. doi: 10.1128/mBio.00379-15.


Immigrants in immunology: the benefits of lax borders.

Stagaman K, Martinez ES, Guillemin K.

Trends Immunol. 2015 May;36(5):286-9. doi: 10.1016/ Epub 2015 Apr 9. Review.


Spatial and temporal features of the growth of a bacterial species colonizing the zebrafish gut.

Jemielita M, Taormina MJ, Burns AR, Hampton JS, Rolig AS, Guillemin K, Parthasarathy R.

mBio. 2014 Dec 16;5(6). pii: e01751-14. doi: 10.1128/mBio.01751-14.


Intestinal alkaline phosphatase deficiency leads to lipopolysaccharide desensitization and faster weight gain.

Yang Y, Millán JL, Mecsas J, Guillemin K.

Infect Immun. 2015 Jan;83(1):247-58. doi: 10.1128/IAI.02520-14. Epub 2014 Oct 27.


Tending a complex microbiota requires major immune complexity.

Stagaman K, Guillemin K, Milligan-Myhre K.

Mol Ecol. 2014 Oct;23(19):4679-81. doi: 10.1111/mec.12895.


A twist in the tail.

Guillemin K, Rolig AS.

Elife. 2014 Mar 4;3:e02386. doi: 10.7554/eLife.02386.


Draft Genome Sequence of Aeromonas veronii Hm21, a Symbiotic Isolate from the Medicinal Leech Digestive Tract.

Bomar L, Stephens WZ, Nelson MC, Velle K, Guillemin K, Graf J.

Genome Announc. 2013 Oct 3;1(5). pii: e00800-13. doi: 10.1128/genomeA.00800-13.


A retrospective study of the prevalence and classification of intestinal neoplasia in zebrafish (Danio rerio).

Paquette CE, Kent ML, Buchner C, Tanguay RL, Guillemin K, Mason TJ, Peterson TS.

Zebrafish. 2013 Jun;10(2):228-36. doi: 10.1089/zeb.2012.0828. Epub 2013 Apr 1.


H. pylori virulence factor CagA increases intestinal cell proliferation by Wnt pathway activation in a transgenic zebrafish model.

Neal JT, Peterson TS, Kent ML, Guillemin K.

Dis Model Mech. 2013 May;6(3):802-10. doi: 10.1242/dmm.011163. Epub 2013 Mar 1.


Transgenic expression of the Helicobacter pylori virulence factor CagA promotes apoptosis or tumorigenesis through JNK activation in Drosophila.

Wandler AM, Guillemin K.

PLoS Pathog. 2012;8(10):e1002939. doi: 10.1371/journal.ppat.1002939. Epub 2012 Oct 18.

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