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Items: 13

1.

Gyrase containing a single C-terminal domain catalyzes negative supercoiling of DNA by decreasing the linking number in steps of two.

Stelljes JT, Weidlich D, Gubaev A, Klostermeier D.

Nucleic Acids Res. 2018 Jul 27;46(13):6773-6784. doi: 10.1093/nar/gky470.

2.

'Slipped Sandwich' Model for Chitin and Chitosan Perception in Arabidopsis.

Gubaeva E, Gubaev A, Melcher RLJ, Cord-Landwehr S, Singh R, El Gueddari NE, Moerschbacher BM.

Mol Plant Microbe Interact. 2018 Nov;31(11):1145-1153. doi: 10.1094/MPMI-04-18-0098-R. Epub 2018 Sep 5.

PMID:
29787346
3.

Binding and Hydrolysis of a Single ATP Is Sufficient for N-Gate Closure and DNA Supercoiling by Gyrase.

Hartmann S, Gubaev A, Klostermeier D.

J Mol Biol. 2017 Nov 24;429(23):3717-3729. doi: 10.1016/j.jmb.2017.10.005. Epub 2017 Oct 12.

PMID:
29032205
4.

DNA gyrase with a single catalytic tyrosine can catalyze DNA supercoiling by a nicking-closing mechanism.

Gubaev A, Weidlich D, Klostermeier D.

Nucleic Acids Res. 2016 Dec 1;44(21):10354-10366. Epub 2016 Aug 23.

5.

Reprint of "The mechanism of negative DNA supercoiling: a cascade of DNA-induced conformational changes prepares gyrase for strand passage".

Gubaev A, Klostermeier D.

DNA Repair (Amst). 2014 Aug;20:130-141. doi: 10.1016/j.dnarep.2014.06.006. Epub 2014 Jun 25.

PMID:
24974097
6.

eIF4B, eIF4G and RNA regulate eIF4A activity in translation initiation by modulating the eIF4A conformational cycle.

Harms U, Andreou AZ, Gubaev A, Klostermeier D.

Nucleic Acids Res. 2014 Jul;42(12):7911-22. doi: 10.1093/nar/gku440. Epub 2014 May 21.

7.

The mechanism of negative DNA supercoiling: a cascade of DNA-induced conformational changes prepares gyrase for strand passage.

Gubaev A, Klostermeier D.

DNA Repair (Amst). 2014 Apr;16:23-34. doi: 10.1016/j.dnarep.2014.01.011. Epub 2014 Feb 22. Review.

PMID:
24674625
8.

Potassium ions are required for nucleotide-induced closure of gyrase N-gate.

Gubaev A, Klostermeier D.

J Biol Chem. 2012 Mar 30;287(14):10916-21. doi: 10.1074/jbc.M111.308247. Epub 2012 Feb 16.

9.

DNA-induced narrowing of the gyrase N-gate coordinates T-segment capture and strand passage.

Gubaev A, Klostermeier D.

Proc Natl Acad Sci U S A. 2011 Aug 23;108(34):14085-90. doi: 10.1073/pnas.1102100108. Epub 2011 Aug 4.

10.

eIF4G stimulates the activity of the DEAD box protein eIF4A by a conformational guidance mechanism.

Hilbert M, Kebbel F, Gubaev A, Klostermeier D.

Nucleic Acids Res. 2011 Mar;39(6):2260-70. doi: 10.1093/nar/gkq1127. Epub 2010 Nov 9.

11.

The DNA-gate of Bacillus subtilis gyrase is predominantly in the closed conformation during the DNA supercoiling reaction.

Gubaev A, Hilbert M, Klostermeier D.

Proc Natl Acad Sci U S A. 2009 Aug 11;106(32):13278-83. doi: 10.1073/pnas.0902493106. Epub 2009 Jul 29.

12.

Cooperative binding of ATP and RNA induces a closed conformation in a DEAD box RNA helicase.

Theissen B, Karow AR, Köhler J, Gubaev A, Klostermeier D.

Proc Natl Acad Sci U S A. 2008 Jan 15;105(2):548-53. doi: 10.1073/pnas.0705488105. Epub 2008 Jan 9.

13.

[The pharmacological properties of a direct-action anticoagulant from the herb Nonea poulla (L.) D. C].

Gubaev AG, Ortenberg EA, Rusakova OA, Chiriat'ev EA.

Eksp Klin Farmakol. 1996 Jan-Feb;59(1):40-2. Russian.

PMID:
8704632

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