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treeio: an R package for phylogenetic tree input and output with richly annotated and associated data.

Wang LG, Lam TT, Xu S, Dai Z, Zhou L, Feng T, Guo P, Dunn CW, Jones BR, Bradley T, Zhu H, Guan Y, Jiang Y, Yu G.

Mol Biol Evol. 2019 Oct 21. pii: msz240. doi: 10.1093/molbev/msz240. [Epub ahead of print]


Revealing dynamic impacts of socioeconomic factors on air pollution changes in Guangdong Province, China.

Xu X, Huang G, Liu L, Guan Y, Zhai M, Li Y.

Sci Total Environ. 2019 Sep 1;699:134178. doi: 10.1016/j.scitotenv.2019.134178. [Epub ahead of print]


Causality of Biodiversity Loss: Climate, Vegetation, and Urbanization in China and America.

Cai D, Fraedrich K, Guan Y, Guo S, Zhang C, Carvalho LMV, Zhu X.

Sensors (Basel). 2019 Oct 17;19(20). pii: E4499. doi: 10.3390/s19204499.


Investigating the synergetic dispersing effect of hydrolyzed biomacromolecule Cellulase and SDS on CuPc pigment.

Zhao Y, Wang R, Fang K, Tan Y, Chen S, Guan Y, Hao L.

Colloids Surf B Biointerfaces. 2019 Oct 10;184:110568. doi: 10.1016/j.colsurfb.2019.110568. [Epub ahead of print]


Induced Intermediate Mesoderm Combined with Decellularized Kidney Scaffolds for Functional Engineering Kidney.

Zhang J, Li K, Kong F, Sun C, Zhang D, Yu X, Wang X, Li X, Liu T, Shao G, Guan Y, Zhao S.

Tissue Eng Regen Med. 2019 Jun 22;16(5):501-512. doi: 10.1007/s13770-019-00197-9. eCollection 2019 Oct.


Identification of lncRNA NEAT1/miR-21/RRM2 axis as a novel biomarker in breast cancer.

Quan D, Chen K, Zhang J, Guan Y, Yang D, Wu H, Wu S, Lv L.

J Cell Physiol. 2019 Oct 17. doi: 10.1002/jcp.29225. [Epub ahead of print]


Silica Removal Using Magnetic Iron-Aluminum (Fe-Al) Hybrid Nanomaterials: Measurements, Adsorption Mechanisms, and Implications for Silica Scaling in Reverse Osmosis.

Guan YF, Marcos-Hernández M, Lu X, Cheng W, Yu HQ, Elimelech M, Villagrán D.

Environ Sci Technol. 2019 Oct 17. doi: 10.1021/acs.est.9b02883. [Epub ahead of print]


LncRNA SOX2OT Mediates Mitochondrial Dysfunction in Septic Cardiomyopathy.

Chen M, Guan Y, Li A, Zhao YZ, Zhang L, Zhang L, Gong Y.

DNA Cell Biol. 2019 Oct 16. doi: 10.1089/dna.2019.4839. [Epub ahead of print]


On the Impact of Singularities in the Two State Adiabatic to Diabatic State Transformation: A Global Treatment.

Wang Y, Guan Y, Yarkony DR.

J Phys Chem A. 2019 Oct 16. doi: 10.1021/acs.jpca.9b08519. [Epub ahead of print]


Prophylactic antibiotics may be unnecessary in gastric endoscopic submucosal dissection due to the low incidence of bacteremia.

Liu Y, Chen Y, Shu X, Zhu Y, Li G, Hong J, Song C, Guan Y, Zhou X.

Surg Endosc. 2019 Oct 15. doi: 10.1007/s00464-019-07143-9. [Epub ahead of print]


From parasitic disease control to global health: new orientation of the National Institute of Parasitic Diseases, China CDC.

Chen J, Ding W, Li Z, Dan Zhou D, Yang P, Wang RB, Zheng B, Sheng HF, Guan YY, Xiao N, Li SZ, Zhou XN.

Acta Trop. 2019 Oct 12:105219. doi: 10.1016/j.actatropica.2019.105219. [Epub ahead of print] Review.


Danshenol A Alleviates Hypertension-Induced Cardiac Remodeling by Ameliorating Mitochondrial Dysfunction and Suppressing Reactive Oxygen Species Production.

Chen K, Guan Y, Ma Y, Quan D, Zhang J, Wu S, Liu X, Lv L, Zhang G.

Oxid Med Cell Longev. 2019 Sep 11;2019:2580409. doi: 10.1155/2019/2580409. eCollection 2019.


Dynamics of Synovial Fluid Aggregation under Shear.

Cook SG, Guan Y, Pacifici NJ, Brown CN, Czako E, Samak M, Bonassar LJ, Gourdon D.

Langmuir. 2019 Oct 13. doi: 10.1021/acs.langmuir.9b02028. [Epub ahead of print]


Efficacy and Safety of 12-week Interferon-based Danoprevir Regimen in Patients with Genotype 1 Chronic Hepatitis C.

Wei L, Shang J, Ma Y, Xu X, Huang Y, Guan Y, Duan Z, Zhang W, Gao Z, Zhang M, Li J, Jia J, Yang Y, Wen X, Wang M, Jia Z, Ning B, Chen Y, Qi Y, Du J, Jiang J, Tong L, Xie Y, Wu JJ.

J Clin Transl Hepatol. 2019 Sep 28;7(3):221-225. doi: 10.14218/JCTH.2019.00018. Epub 2019 Jul 22.


Efficacy and Safety of All-oral, 12-week Ravidasvir Plus Ritonavir-boosted Danoprevir and Ribavirin in Treatment-naïve Noncirrhotic HCV Genotype 1 Patients: Results from a Phase 2/3 Clinical Trial in China.

Xu X, Feng B, Guan Y, Zheng S, Sheng J, Yang X, Ma Y, Huang Y, Kang Y, Wen X, Li J, Tan Y, He Q, Xie Q, Wang M, An P, Gong G, Liu H, Ning Q, Hua R, Ning B, Xie W, Zhang J, Huang W, Yang Y, Lin M, Zhao Y, Yu Y, Jia J, Yang D, Chen L, Ye Y, Nan Y, Gong Z, Zhang Q, Hu P, Wang F, Li Y, Li D, Jia Z, Hou J, Chen C, Wu JJ, Wei L.

J Clin Transl Hepatol. 2019 Sep 28;7(3):213-220. doi: 10.14218/JCTH.2019.00033. Epub 2019 Sep 30.


Fast Model-Fitting of Bayesian Variable Selection Regression Using the Iterative Complex Factorization Algorithm.

Zhou Q, Guan Y.

Bayesian Anal. 2019 Jun;14(2):573-594. doi: 10.1214/18-BA1120. Epub 2018 Aug 29.


[Establishment of skin and joint micro-dialysis sampling method of triptolide in vivo by HPLC-MS/MS].

Guan YM, Liu J, Yu YT, Zhu WF, Chen LH, Jin C, Zang ZZ.

Zhongguo Zhong Yao Za Zhi. 2019 Aug;44(16):3576-3581. doi: 10.19540/j.cnki.cjcmm.20190305.006. Chinese.


[Pharmacokinetics of skin and blood of Tripterygium wilfordii and Paeonia lactiflora micro-emulsion gel based on micro-dialysis technology].

DU Q, Luo J, Guan YM, Xiao F, Zang ZZ, Jin C, Chen LH.

Zhongguo Zhong Yao Za Zhi. 2019 Aug;44(16):3569-3575. doi: 10.19540/j.cnki.cjcmm.20190318.503. Chinese.


Matrine inhibits the development and progression of ovarian cancer by repressing cancer associated phosphorylation signaling pathways.

Zhang X, Hou G, Liu A, Xu H, Guan Y, Wu Y, Deng J, Cao X.

Cell Death Dis. 2019 Oct 10;10(10):770. doi: 10.1038/s41419-019-2013-3.


Identification of key amino acids in the PB2 and M1 proteins of H7N9 influenza virus that affect its transmission in guinea pigs.

Kong H, Ma S, Wang J, Gu C, Wang Z, Shi J, Deng G, Guan Y, Chen H.

J Virol. 2019 Oct 9. pii: JVI.01180-19. doi: 10.1128/JVI.01180-19. [Epub ahead of print]


Do Women who Receive a Negative BRCA1/2 Risk Result Understand the Implications for Breast Cancer Risk?

Guan Y, Condit CM, Escoffery C, Bellcross CA, McBride CM.

Public Health Genomics. 2019 Oct 9:1-8. doi: 10.1159/000503129. [Epub ahead of print]


Dysbiosis of the Gut Microbiome is associated with Tumor Biomarkers in Lung Cancer.

Liu F, Li J, Guan Y, Lou Y, Chen H, Xu M, Deng D, Chen J, Ni B, Zhao L, Li H, Sang H, Cai X.

Int J Biol Sci. 2019 Sep 7;15(11):2381-2392. doi: 10.7150/ijbs.35980. eCollection 2019.


A flame photometric detector with a silicon photodiode assembly for sulfur detection.

Ni L, Geng X, Li S, Ning H, Gao Y, Guan Y.

Talanta. 2020 Jan 15;207:120283. doi: 10.1016/j.talanta.2019.120283. Epub 2019 Aug 21.


Investigation on the Thermal Dissociation of Vinyl Nitrite with a Saddle Point Involved.

Guan Y, Lou J, Ma H, Song J.

ACS Omega. 2019 Sep 16;4(14):16052-16061. doi: 10.1021/acsomega.9b02242. eCollection 2019 Oct 1.


The cellular responses of autophagy, apoptosis, and 5-methylcytosine level in zebrafish cells upon nutrient deprivation stress.

Fan X, Hou T, Zhang S, Guan Y, Jia J, Wang Z.

Chemosphere. 2019 Sep 27;241:124989. doi: 10.1016/j.chemosphere.2019.124989. [Epub ahead of print]


Abduction range: A potential parameter for the long exercise test in hypokalemic periodic paralysis during inter-attack periods.

Zhang L, Niu J, Li Y, Guan Y, Cui L, Liu M.

Muscle Nerve. 2019 Oct 6. doi: 10.1002/mus.26721. [Epub ahead of print]


Resective surgery for drug-resistant posttraumatic epilepsy: predictors of seizure outcome.

He X, Guan Y, Zhai F, Zhou J, Li T, Luan G.

J Neurosurg. 2019 Oct 4:1-8. doi: 10.3171/2019.7.JNS191233. [Epub ahead of print]


Effect of Methyl Jasmonate on Phenolic Accumulation in Wounded Broccoli.

Guan Y, Hu W, Jiang A, Xu Y, Sa R, Feng K, Zhao M, Yu J, Ji Y, Hou M, Yang X.

Molecules. 2019 Sep 30;24(19). pii: E3537. doi: 10.3390/molecules24193537.


Polyphenols extract from lotus seedpod (Nelumbo nucifera Gaertn.): Phenolic compositions, antioxidant, and antiproliferative activities.

Shen Y, Guan Y, Song X, He J, Xie Z, Zhang Y, Zhang H, Tang D.

Food Sci Nutr. 2019 Aug 9;7(9):3062-3070. doi: 10.1002/fsn3.1165. eCollection 2019 Sep.


Computational analysis of naturally occurring resistance-associated substitutions in genes NS3, NS5A, and NS5B among 86 subtypes of hepatitis C virus worldwide.

Wu R, Geng D, Chi X, Wang X, Gao X, Xu H, Shi Y, Guan Y, Wang Y, Jin J, Ding Y, Niu J.

Infect Drug Resist. 2019 Sep 19;12:2987-3015. doi: 10.2147/IDR.S218584. eCollection 2019.


Changes in diffusion tensor imaging indices of the lumbosacral enlargement correlate with cervical spinal cord changes and clinical assessment in patients with cervical spondylotic myelopathy.

Cui L, Kong C, Chen X, Liu Y, Zhang Y, Guan Y.

Clin Neurol Neurosurg. 2019 Feb 18;186:105282. doi: 10.1016/j.clineuro.2019.02.014. [Epub ahead of print]


Pantoprazole pretreatment elevates sensitivity to vincristine in drug-resistant oral epidermoid carcinoma in vitro and in vivo.

Lu ZN, Shi ZY, Dang YF, Cheng YN, Guan YH, Hao ZJ, Tian B, He HW, Guo XL.

Biomed Pharmacother. 2019 Sep 27;120:109478. doi: 10.1016/j.biopha.2019.109478. [Epub ahead of print]


Multi-criteria decision analysis of optimal planting for enhancing phytoremediation of trace heavy metals in mining sites under interval residual contaminant concentrations.

Lu J, Lu H, Li J, Liu J, Feng S, Guan Y.

Environ Pollut. 2019 Sep 18;255(Pt 2):113255. doi: 10.1016/j.envpol.2019.113255. [Epub ahead of print]


Socioeconomic factors and regional differences of PM2.5 health risks in China.

Zhang Z, Shao C, Guan Y, Xue C.

J Environ Manage. 2019 Sep 23;251:109564. doi: 10.1016/j.jenvman.2019.109564. [Epub ahead of print]


Efficacy and Safety of Toutongning Capsule in Patients with Migraine: A Multicenter, Randomized, Double-Blind, Placebo-Controlled Trial.

Yu S, Ran Y, Wan Q, Yang X, Chen H, Wang H, Hu X, Mao S, Yu T, Luo G, Guan Y, Gao X, Li X, Zhou M, Li Y.

J Altern Complement Med. 2019 Sep 25. doi: 10.1089/acm.2018.0500. [Epub ahead of print]


Gestational B-vitamin supplementation alleviates PM2.5-induced autism-like behavior and hippocampal neurodevelopmental impairment in mice offspring.

Wang T, Zhang T, Sun L, Li W, Zhang C, Yu L, Guan Y.

Ecotoxicol Environ Saf. 2019 Dec 15;185:109686. doi: 10.1016/j.ecoenv.2019.109686. Epub 2019 Sep 20.


DACT1 Involvement in the Cytoskeletal Arrangement of Cardiomyocytes in Atrial Fibrillation by Regulating Cx43.

Hou J, Yue Y, Hu B, Xu G, Su R, Lv L, Huang J, Yao J, Guan Y, Wang K, Wu Z.

Braz J Cardiovasc Surg. 2019 Sep 23. doi: 10.21470/1678-9741-2019-0033. [Epub ahead of print]


Metabolomic profiling identifies novel biomarkers and mechanisms in human bladder cancer treated with submucosal injection of gemcitabine.

Yang C, Sun X, Wang H, Lu T, Wu K, Guan Y, Tang J, Liang J, Sun R, Guo Z, Zheng S, Wu X, Jiang H, Jiang X, Zhong B, Niu X, Sun S, Wang X, Chen M, Fu G.

Int J Mol Med. 2019 Nov;44(5):1952-1962. doi: 10.3892/ijmm.2019.4347. Epub 2019 Sep 23.


MicroRNA-375 regulates oocyte in vitro maturation by targeting ADAMTS1 and PGR in bovine cumulus cells.

Zhang J, Guan Y, Shen C, Zhang L, Wang X.

Biomed Pharmacother. 2019 Oct;118:109350. doi: 10.1016/j.biopha.2019.109350. Epub 2019 Aug 21.


Pyrolysis kinetics behavior of solid leather wastes.

Guan Y, Liu C, Peng Q, Zaman F, Zhang H, Jin Z, Wang A, Wang W, Huang Y.

Waste Manag. 2019 Dec;100:122-127. doi: 10.1016/j.wasman.2019.09.005. Epub 2019 Sep 16.


A Phenanthroline-Based Fluorescent Probe for Highly Selective Detection of Extreme Alkalinity (pH > 14) in Aqueous Solution.

Ma X, Chen S, Yu H, Guan Y, Li J, Yan X, Zhang Z.

Nanoscale Res Lett. 2019 Sep 18;14(1):318. doi: 10.1186/s11671-019-3149-x.


Multifunctional Tetracene/Pentacene Host/Guest Nanorods for Enhanced Upconversion Photodynamic Tumor Therapy.

Zhang R, Guan Y, Zhu Z, Lv H, Li F, Sun S, Li J.

ACS Appl Mater Interfaces. 2019 Oct 16;11(41):37479-37490. doi: 10.1021/acsami.9b12967. Epub 2019 Oct 1.


Increased interleukin-18 level contributes to the development and severity of ischemic stroke.

Hao Y, Ding J, Hong R, Bai S, Wang Z, Mo C, Hu Q, Li Z, Guan Y.

Aging (Albany NY). 2019 Sep 16;11(18):7457-7472. doi: 10.18632/aging.102253. Epub 2019 Sep 16.


Engineered nano-immunopotentiators efficiently promote cancer immunotherapy for inhibiting and preventing lung metastasis of melanoma.

Luo L, Iqbal MZ, Liu C, Xing J, Akakuru OU, Fang Q, Li Z, Dai Y, Li A, Guan Y, Wu A.

Biomaterials. 2019 Dec;223:119464. doi: 10.1016/j.biomaterials.2019.119464. Epub 2019 Sep 3.


Glioblastoma extracellular vesicles induce the tumour-promoting transformation of neural stem cells.

Wang J, Liu J, Sun G, Meng H, Wang J, Guan Y, Yin Y, Zhao Z, Dong X, Yin S, Li H, Cheng Y, Wu H, Wu A, Yu X, Chen L.

Cancer Lett. 2019 Dec 1;466:1-12. doi: 10.1016/j.canlet.2019.09.004. Epub 2019 Sep 12.


Safety and efficacy of coblopasvir and sofosbuvir in patients with genotypes 1, 2, 3 and 6 HCV infections without or with compensated cirrhosis.

Rao H, Song G, Li G, Yang Y, Wu X, Guan Y, Mao Q, Jiang X, Wang C, Zhang Y, Jia J, Guo X, Li C, Ning J, Qin H, Pan H, Wei L.

J Viral Hepat. 2019 Sep 13. doi: 10.1111/jvh.13208. [Epub ahead of print]


LAG-3 expression on tumor-infiltrating T cells in soft tissue sarcoma correlates with poor survival.

Que Y, Fang Z, Guan Y, Xiao W, Xu B, Zhao J, Chen H, Zhang X, Zeng M, Liang Y, Zhang X.

Cancer Biol Med. 2019 May;16(2):331-340. doi: 10.20892/j.issn.2095-3941.2018.0306.


Oligo Design with Single Primer Binding Site for High Capacity DNA-Based Data Storage.

Wang Y, Noor-A-Rahim M, Zhang J, Gunawan E, Guan YL, Poh CL.

IEEE/ACM Trans Comput Biol Bioinform. 2019 Sep 10. doi: 10.1109/TCBB.2019.2940177. [Epub ahead of print]


Long-term exposure to 4G smartphone radiofrequency electromagnetic radiation diminished male reproductive potential by directly disrupting Spock3-MMP2-BTB axis in the testes of adult rats.

Yu G, Tang Z, Chen H, Chen Z, Wang L, Cao H, Wang G, Xing J, Shen H, Cheng Q, Li D, Wang G, Xiang Y, Guan Y, Zhu Y, Liu Z, Bai Z.

Sci Total Environ. 2019 Aug 31;698:133860. doi: 10.1016/j.scitotenv.2019.133860. [Epub ahead of print]


Quantitative bioanalytical LC-MS/MS assay for S130 in rat plasma-application to a pharmacokinetic study.

Guan Y, Fu Y, Liu Y, Wang S, Zhao M, Jin Z, Jiang F, Hong L, Huang M, Li M, Zhong G.

Bioanalysis. 2019 Aug;11(16):1469-1481. doi: 10.4155/bio-2019-0101. Epub 2019 Sep 12.


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