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[Effects of Genipin on the expression of uncoupling protein 1 in brown adipose and white adipose tissues in mice].

Shen NN, Gong DZ, Zou FK, Yan Y, Guan LL, Zou Y.

Zhongguo Ying Yong Sheng Li Xue Za Zhi. 2019 Jan;35(1):74-78. doi: 10.12047/j.cjap.5749.2019.018. Chinese.


Altered mucosa-associated microbiota in the ileum and colon of neonatal calves in response to delayed first colostrum feeding.

Ma T, O'Hara E, Song Y, Fischer AJ, He Z, Steele MA, Guan LL.

J Dairy Sci. 2019 Aug;102(8):7073-7086. doi: 10.3168/jds.2018-16130. Epub 2019 Jun 13.


Host genetics influence the rumen microbiota and heritable rumen microbial features associate with feed efficiency in cattle.

Li F, Li C, Chen Y, Liu J, Zhang C, Irving B, Fitzsimmons C, Plastow G, Guan LL.

Microbiome. 2019 Jun 13;7(1):92. doi: 10.1186/s40168-019-0699-1.


Saccharomyces cerevisiae boulardii CNCM I-1079 affects health, growth, and fecal microbiota in milk-fed veal calves.

Villot C, Ma T, Renaud DL, Ghaffari MH, Gibson DJ, Skidmore A, Chevaux E, Guan LL, Steele MA.

J Dairy Sci. 2019 Aug;102(8):7011-7025. doi: 10.3168/jds.2018-16149. Epub 2019 May 31.


Invited review: Advances and challenges in application of feedomics to improve dairy cow production and health.

Sun HZ, Plastow G, Guan LL.

J Dairy Sci. 2019 Jul;102(7):5853-5870. doi: 10.3168/jds.2018-16126. Epub 2019 Apr 25.


Assessment of rumen bacteria in dairy cows with varied milk protein yield.

Xue MY, Sun HZ, Wu XH, Guan LL, Liu JX.

J Dairy Sci. 2019 Jun;102(6):5031-5041. doi: 10.3168/jds.2018-15974. Epub 2019 Apr 10.


Short communication: Relationship of blood DNA methylation rate and milk performance in dairy cows.

Wang L, Sun HZ, Guan LL, Liu JX.

J Dairy Sci. 2019 Jun;102(6):5208-5211. doi: 10.3168/jds.2018-15869. Epub 2019 Apr 10.


Improved taxonomic assignment of rumen bacterial 16S rRNA sequences using a revised SILVA taxonomic framework.

Henderson G, Yilmaz P, Kumar S, Forster RJ, Kelly WJ, Leahy SC, Guan LL, Janssen PH.

PeerJ. 2019 Mar 5;7:e6496. doi: 10.7717/peerj.6496. eCollection 2019.


Effect of extended colostrum feeding on plasma glucagon-like peptide-1 concentration in newborn calves.

Inabu Y, Pyo J, Pletts S, Guan LL, Steele MA, Sugino T.

J Dairy Sci. 2019 May;102(5):4619-4627. doi: 10.3168/jds.2018-15616. Epub 2019 Mar 1.


MicroRNA expression profiles across blood and different tissues in cattle.

Sun HZ, Chen Y, Guan LL.

Sci Data. 2019 Feb 12;6:190013. doi: 10.1038/sdata.2019.13.


A collection of rumen bacteriome data from 334 mid-lactation dairy cows.

Sun HZ, Xue M, Guan LL, Liu J.

Sci Data. 2019 Jan 22;6:180301. doi: 10.1038/sdata.2018.301.


Taxonomic and Functional Compositions of the Small Intestinal Microbiome in Neonatal Calves Provide a Framework for Understanding Early Life Gut Health.

Malmuthuge N, Liang G, Griebel PJ, Guan LL.

Appl Environ Microbiol. 2019 Mar 6;85(6). pii: e02534-18. doi: 10.1128/AEM.02534-18. Print 2019 Mar 15.


Dissect the mode of action of probiotics in affecting host-microbial interactions and immunity in food producing animals.

Ma T, Suzuki Y, Guan LL.

Vet Immunol Immunopathol. 2018 Nov;205:35-48. doi: 10.1016/j.vetimm.2018.10.004. Epub 2018 Oct 22. Review.


Landscape of multi-tissue global gene expression reveals the regulatory signatures of feed efficiency in beef cattle.

Sun HZ, Zhao K, Zhou M, Chen Y, Guan LL.

Bioinformatics. 2019 May 15;35(10):1712-1719. doi: 10.1093/bioinformatics/bty883.


Colostrum feeding shapes the hindgut microbiota of dairy calves during the first 12 h of life.

Song Y, Malmuthuge N, Li F, Guan LL.

FEMS Microbiol Ecol. 2019 Jan 1;95(1). doi: 10.1093/femsec/fiy203.


Effect of a butyrate-fortified milk replacer on gastrointestinal microbiota and products of fermentation in artificially reared dairy calves at weaning.

O'Hara E, Kelly A, McCabe MS, Kenny DA, Guan LL, Waters SM.

Sci Rep. 2018 Oct 8;8(1):14901. doi: 10.1038/s41598-018-33122-6.


Genome wide transcriptome analysis provides bases on colonic mucosal immune system development affected by colostrum feeding strategies in neonatal calves.

He Z, Fischer A, Song Y, Steele M, Guan LL.

BMC Genomics. 2018 Aug 28;19(1):635. doi: 10.1186/s12864-018-5017-y.


Review: Biological determinants of between-animal variation in feed efficiency of growing beef cattle.

Cantalapiedra-Hijar G, Abo-Ismail M, Carstens GE, Guan LL, Hegarty R, Kenny DA, McGee M, Plastow G, Relling A, Ortigues-Marty I.

Animal. 2018 Dec;12(s2):s321-s335. doi: 10.1017/S1751731118001489. Epub 2018 Aug 24. Review.


Assessment of Rumen Microbiota from a Large Dairy Cattle Cohort Reveals the Pan and Core Bacteriomes Contributing to Varied Phenotypes.

Xue M, Sun H, Wu X, Guan LL, Liu J.

Appl Environ Microbiol. 2018 Sep 17;84(19). pii: e00970-18. doi: 10.1128/AEM.00970-18. Print 2018 Oct 1.


Persistence of Cellulolytic Bacteria Fibrobacter and Treponema After Short-Term Corn Stover-Based Dietary Intervention Reveals the Potential to Improve Rumen Fibrolytic Function.

Xie X, Yang C, Guan LL, Wang J, Xue M, Liu JX.

Front Microbiol. 2018 Jun 26;9:1363. doi: 10.3389/fmicb.2018.01363. eCollection 2018.


Serum metabolome profiling revealed potential biomarkers for milk protein yield in dairy cows.

Wu X, Sun H, Xue M, Wang D, Guan LL, Liu J.

J Proteomics. 2018 Jul 30;184:54-61. doi: 10.1016/j.jprot.2018.06.005. Epub 2018 Jun 18.


Short communication: The effect of delayed colostrum feeding on plasma concentrations of glucagon-like peptide 1 and 2 in newborn calves.

Inabu Y, Fischer A, Song Y, Guan LL, Oba M, Steele MA, Sugino T.

J Dairy Sci. 2018 Jul;101(7):6627-6631. doi: 10.3168/jds.2018-14412. Epub 2018 Apr 19.


Alfalfa Intervention Alters Rumen Microbial Community Development in Hu Lambs During Early Life.

Yang B, Le J, Wu P, Liu J, Guan LL, Wang J.

Front Microbiol. 2018 Mar 27;9:574. doi: 10.3389/fmicb.2018.00574. eCollection 2018.


Arteriovenous blood metabolomics: An efficient method to determine the key metabolic pathway for milk synthesis in the intra-mammary gland.

Wang B, Sun H, Wu X, Jiang L, Guan LL, Liu J.

Sci Rep. 2018 Apr 4;8(1):5598. doi: 10.1038/s41598-018-23953-8.


Assessment of microbiome changes after rumen transfaunation: implications on improving feed efficiency in beef cattle.

Zhou M, Peng YJ, Chen Y, Klinger CM, Oba M, Liu JX, Guan LL.

Microbiome. 2018 Mar 27;6(1):62. doi: 10.1186/s40168-018-0447-y.


Air-Dried Brown Seaweed, Ascophyllum nodosum, Alters the Rumen Microbiome in a Manner That Changes Rumen Fermentation Profiles and Lowers the Prevalence of Foodborne Pathogens.

Zhou M, Hünerberg M, Chen Y, Reuter T, McAllister TA, Evans F, Critchley AT, Guan LL.

mSphere. 2018 Jan 31;3(1). pii: e00017-18. doi: 10.1128/mSphere.00017-18. eCollection 2018 Jan-Feb.


Effect of delaying colostrum feeding on passive transfer and intestinal bacterial colonization in neonatal male Holstein calves.

Fischer AJ, Song Y, He Z, Haines DM, Guan LL, Steele MA.

J Dairy Sci. 2018 Apr;101(4):3099-3109. doi: 10.3168/jds.2017-13397. Epub 2018 Feb 4.


Symposium review: Mining metagenomic and metatranscriptomic data for clues about microbial metabolic functions in ruminants.

Li F, Neves ALA, Ghoshal B, Guan LL.

J Dairy Sci. 2018 Jun;101(6):5605-5618. doi: 10.3168/jds.2017-13356. Epub 2017 Dec 21. Review.


Enhancing the Resolution of Rumen Microbial Classification from Metatranscriptomic Data Using Kraken and Mothur.

Neves ALA, Li F, Ghoshal B, McAllister T, Guan LL.

Front Microbiol. 2017 Dec 7;8:2445. doi: 10.3389/fmicb.2017.02445. eCollection 2017.


Shift of hindgut microbiota and microbial short chain fatty acids profiles in dairy calves from birth to pre-weaning.

Song Y, Malmuthuge N, Steele MA, Guan LL.

FEMS Microbiol Ecol. 2018 Mar 1;94(3). doi: 10.1093/femsec/fix179.


[Recent advance in impacts of pulmonary rehabilitation on inflammation and oxidative stress in chronic obstructive pulmonary disease].

Guo BP, Zhou LL, Guan LL.

Zhonghua Jie He He Hu Xi Za Zhi. 2017 Dec 12;40(12):936-938. doi: 10.3760/cma.j.issn.1001-0939.2017.12.014. Chinese. No abstract available.


Associations of rumen parameters with feed efficiency and sampling routine in beef cattle.

Lam S, Munro JC, Zhou M, Guan LL, Schenkel FS, Steele MA, Miller SP, Montanholi YR.

Animal. 2018 Jul;12(7):1442-1450. doi: 10.1017/S1751731117002750. Epub 2017 Nov 10.


Short communication: The effect of heat treatment of bovine colostrum on the concentration of oligosaccharides in colostrum and in the intestine of neonatal male Holstein calves.

Fischer AJ, Malmuthuge N, Guan LL, Steele MA.

J Dairy Sci. 2018 Jan;101(1):401-407. doi: 10.3168/jds.2017-13533. Epub 2017 Nov 6.


Interactions of the Hindgut Mucosa-Associated Microbiome with Its Host Regulate Shedding of Escherichia coli O157:H7 by Cattle.

Wang O, McAllister TA, Plastow G, Stanford K, Selinger B, Guan LL.

Appl Environ Microbiol. 2017 Dec 15;84(1). pii: e01738-17. doi: 10.1128/AEM.01738-17. Print 2018 Jan 1.


Rapid Communication: Evaluation of methane inhibitor 3-nitrooxypropanol and monensin in a high-grain diet using the rumen simulation technique (Rusitec).

Romero-Pérez A, Okine EK, Guan LL, Duval SM, Kindermann M, Beauchemin KA.

J Anim Sci. 2017 Sep;95(9):4072-4077. doi: 10.2527/jas2017.1896.


[Cloning and expression analysis of tocopherol cyclase gene in Carthamus tinctorius].

Guan LL, Cui Q, Han YT, Wu YY, Hu RG, Gu TY, Li HY, Li XK.

Zhongguo Zhong Yao Za Zhi. 2016 Oct;41(20):3727-3732. doi: 10.4268/cjcmm20162005. Chinese.


[Metabolic pathway of flavonoids in Blumea balsamifera].

Xia QF, Zhao Z, Liu HC, Guan LL, Pang YX.

Zhongguo Zhong Yao Za Zhi. 2016 Oct;41(19):3630-3636. doi: 10.4268/cjcmm20161922. Chinese.


Shifts in Host Mucosal Innate Immune Function Are Associated with Ruminal Microbial Succession in Supplemental Feeding and Grazing Goats at Different Ages.

Jiao J, Zhou C, Guan LL, McSweeney CS, Tang S, Wang M, Tan Z.

Front Microbiol. 2017 Aug 30;8:1655. doi: 10.3389/fmicb.2017.01655. eCollection 2017.


Fish oil mitigates myosteatosis and improves chemotherapy efficacy in a preclinical model of colon cancer.

Almasud AA, Giles KH, Miklavcic JJ, Martins KJB, Baracos VE, Putman CT, Guan LL, Mazurak VC.

PLoS One. 2017 Aug 23;12(8):e0183576. doi: 10.1371/journal.pone.0183576. eCollection 2017.


Host mechanisms involved in cattle Escherichia coli O157 shedding: a fundamental understanding for reducing foodborne pathogen in food animal production.

Wang O, McAllister TA, Plastow G, Stanford K, Selinger B, Guan LL.

Sci Rep. 2017 Aug 9;7(1):7630. doi: 10.1038/s41598-017-06737-4.


Comparative transcriptomic analysis of porcine peripheral blood reveals differentially expressed genes from the cytokine-cytokine receptor interaction pathway related to health status.

Ye MH, Bao H, Meng Y, Guan LL, Stothard P, Plastow G.

Genome. 2017 Dec;60(12):1021-1028. doi: 10.1139/gen-2017-0074. Epub 2017 Aug 1.


Host Immune Selection of Rumen Bacteria through Salivary Secretory IgA.

Fouhse JM, Smiegielski L, Tuplin M, Guan LL, Willing BP.

Front Microbiol. 2017 May 12;8:848. doi: 10.3389/fmicb.2017.00848. eCollection 2017.


Sequential Feeding of Lipid Supplement Enriches Beef Adipose Tissues with 18:3n-3 Biohydrogenation Intermediates.

Vahmani P, Aalhus JL, Rolland DC, McAllister TA, Prieto N, Block HC, Proctor SD, Guan LL, Dugan MER.

Lipids. 2017 Jul;52(7):641-649. doi: 10.1007/s11745-017-4259-9. Epub 2017 May 25.


From pre- to postweaning: Transformation of the young calf's gastrointestinal tract.

Meale SJ, Chaucheyras-Durand F, Berends H, Guan LL, Steele MA.

J Dairy Sci. 2017 Jul;100(7):5984-5995. doi: 10.3168/jds.2016-12474. Epub 2017 May 17.


Understanding the gut microbiome of dairy calves: Opportunities to improve early-life gut health.

Malmuthuge N, Guan LL.

J Dairy Sci. 2017 Jul;100(7):5996-6005. doi: 10.3168/jds.2016-12239. Epub 2017 May 10.


Effects of feeding steers extruded flaxseed on its own before hay or mixed with hay on animal performance, carcass quality, and meat and hamburger fatty acid composition.

Vahmani P, Rolland DC, McAllister TA, Block HC, Proctor SD, Guan LL, Prieto N, López-Campos Ó, Aalhus JL, Dugan MER.

Meat Sci. 2017 Sep;131:9-17. doi: 10.1016/j.meatsci.2017.04.008. Epub 2017 Apr 19.


Genetic architecture of gene expression underlying variation in host response to porcine reproductive and respiratory syndrome virus infection.

Kommadath A, Bao H, Choi I, Reecy JM, Koltes JE, Fritz-Waters E, Eisley CJ, Grant JR, Rowland RR, Tuggle CK, Dekkers JC, Lunney JK, Guan LL, Stothard P, Plastow GS.

Sci Rep. 2017 Apr 10;7:46203. doi: 10.1038/srep46203.


Factors influencing ruminal bacterial community diversity and composition and microbial fibrolytic enzyme abundance in lactating dairy cows with a focus on the role of active dry yeast.

AlZahal O, Li F, Guan LL, Walker ND, McBride BW.

J Dairy Sci. 2017 Jun;100(6):4377-4393. doi: 10.3168/jds.2016-11473. Epub 2017 Apr 5.

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