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Haplotype-resolved genomes of geminivirus-resistant and geminivirus-susceptible African cassava cultivars.

Kuon JE, Qi W, Schläpfer P, Hirsch-Hoffmann M, von Bieberstein PR, Patrignani A, Poveda L, Grob S, Keller M, Shimizu-Inatsugi R, Grossniklaus U, Vanderschuren H, Gruissem W.

BMC Biol. 2019 Sep 18;17(1):75. doi: 10.1186/s12915-019-0697-6.


Symplasmic phloem unloading and radial post-phloem transport via vascular rays in tuberous roots of Manihot esculenta.

Mehdi R, Lamm CE, Bodampalli Anjanappa R, Müdsam C, Saeed M, Klima J, Kraner ME, Ludewig F, Knoblauch M, Gruissem W, Sonnewald U, Zierer W.

J Exp Bot. 2019 Oct 24;70(20):5559-5573. doi: 10.1093/jxb/erz297.


Genetic Transformation of Recalcitrant Cassava by Embryo Selection and Increased Hormone Levels.

Lentz EM, Eisner S, McCallum EJ, Schlegel K, Campos FAP, Gruissem W, Vanderschuren H.

Methods Protoc. 2018 Nov 13;1(4). pii: E42. doi: 10.3390/mps1040042.


Enhancement of vitamin B6 levels in rice expressing Arabidopsis vitamin B6 biosynthesis de novo genes.

Mangel N, Fudge JB, Li KT, Wu TY, Tohge T, Fernie AR, Szurek B, Fitzpatrick TB, Gruissem W, Vanderschuren H.

Plant J. 2019 Sep;99(6):1047-1065. doi: 10.1111/tpj.14379. Epub 2019 Jul 11.


Linking CRISPR-Cas9 interference in cassava to the evolution of editing-resistant geminiviruses.

Mehta D, Stürchler A, Anjanappa RB, Zaidi SS, Hirsch-Hoffmann M, Gruissem W, Vanderschuren H.

Genome Biol. 2019 Apr 25;20(1):80. doi: 10.1186/s13059-019-1678-3.


Diurnal changes in concerted plant protein phosphorylation and acetylation in Arabidopsis organs and seedlings.

Uhrig RG, Schläpfer P, Roschitzki B, Hirsch-Hoffmann M, Gruissem W.

Plant J. 2019 Jul;99(1):176-194. doi: 10.1111/tpj.14315. Epub 2019 May 13.


A new full-length circular DNA sequencing method for viral-sized genomes reveals that RNAi transgenic plants provoke a shift in geminivirus populations in the field.

Mehta D, Hirsch-Hoffmann M, Were M, Patrignani A, Zaidi SS, Were H, Gruissem W, Vanderschuren H.

Nucleic Acids Res. 2019 Jan 25;47(2):e9. doi: 10.1093/nar/gky914.


A tribute to Lars Hennig (1970-2018).

Mozgova I, Alexandre C, Steinbach Y, Derkacheva M, Schäfer E, Gruissem W.

J Exp Bot. 2018 Sep 24. doi: 10.1093/jxb/ery337. [Epub ahead of print] No abstract available.


Accelerated ex situ breeding of GBSS- and PTST1-edited cassava for modified starch.

Bull SE, Seung D, Chanez C, Mehta D, Kuon JE, Truernit E, Hochmuth A, Zurkirchen I, Zeeman SC, Gruissem W, Vanderschuren H.

Sci Adv. 2018 Sep 5;4(9):eaat6086. doi: 10.1126/sciadv.aat6086. eCollection 2018 Sep.


Cassava geminivirus agroclones for virus-induced gene silencing in cassava leaves and roots.

Lentz EM, Kuon JE, Alder A, Mangel N, Zainuddin IM, McCallum EJ, Anjanappa RB, Gruissem W, Vanderschuren H.

Plant Methods. 2018 Aug 27;14:73. doi: 10.1186/s13007-018-0340-5. eCollection 2018.


Targeting intracellular transport combined with efficient uptake and storage significantly increases grain iron and zinc levels in rice.

Wu TY, Gruissem W, Bhullar NK.

Plant Biotechnol J. 2019 Jan;17(1):9-20. doi: 10.1111/pbi.12943. Epub 2018 Jun 12.


Facilitated citrate-dependent iron translocation increases rice endosperm iron and zinc concentrations.

Wu TY, Gruissem W, Bhullar NK.

Plant Sci. 2018 May;270:13-22. doi: 10.1016/j.plantsci.2018.02.002. Epub 2018 Feb 7.


Photoperiodic control of the Arabidopsis proteome reveals a translational coincidence mechanism.

Seaton DD, Graf A, Baerenfaller K, Stitt M, Millar AJ, Gruissem W.

Mol Syst Biol. 2018 Mar 1;14(3):e7962. doi: 10.15252/msb.20177962.


Vitamin B1 diversity and characterization of biosynthesis genes in cassava.

Mangel N, Fudge JB, Fitzpatrick TB, Gruissem W, Vanderschuren H.

J Exp Bot. 2017 Jun 15;68(13):3351-3363. doi: 10.1093/jxb/erx196.


Alpha-Glucan, Water Dikinase 1 Affects Starch Metabolism and Storage Root Growth in Cassava (Manihot esculenta Crantz).

Zhou W, He S, Naconsie M, Ma Q, Zeeman SC, Gruissem W, Zhang P.

Sci Rep. 2017 Aug 29;7(1):9863. doi: 10.1038/s41598-017-10594-6.


Single genetic locus improvement of iron, zinc and β-carotene content in rice grains.

Singh SP, Gruissem W, Bhullar NK.

Sci Rep. 2017 Jul 31;7(1):6883. doi: 10.1038/s41598-017-07198-5.


Genome-scale analysis of regulatory protein acetylation enzymes from photosynthetic eukaryotes.

Uhrig RG, Schläpfer P, Mehta D, Hirsch-Hoffmann M, Gruissem W.

BMC Genomics. 2017 Jul 5;18(1):514. doi: 10.1186/s12864-017-3894-0.


FLOWERING LOCUS T Triggers Early and Fertile Flowering in Glasshouse Cassava (Manihot esculenta Crantz).

Bull SE, Alder A, Barsan C, Kohler M, Hennig L, Gruissem W, Vanderschuren H.

Plants (Basel). 2017 May 27;6(2). pii: E22. doi: 10.3390/plants6020022.


Molecular insights into Cassava brown streak virus susceptibility and resistance by profiling of the early host response.

Anjanappa RB, Mehta D, Okoniewski MJ, Szabelska-Berȩsewicz A, Gruissem W, Vanderschuren H.

Mol Plant Pathol. 2018 Feb;19(2):476-489. doi: 10.1111/mpp.12565. Epub 2017 Aug 10.


Tackling agriculturally relevant diseases in the staple crop cassava (Manihot esculenta).

McCallum EJ, Anjanappa RB, Gruissem W.

Curr Opin Plant Biol. 2017 Aug;38:50-58. doi: 10.1016/j.pbi.2017.04.008. Epub 2017 May 3. Review.


Parallel analysis of Arabidopsis circadian clock mutants reveals different scales of transcriptome and proteome regulation.

Graf A, Coman D, Uhrig RG, Walsh S, Flis A, Stitt M, Gruissem W.

Open Biol. 2017 Mar;7(3). pii: 160333. doi: 10.1098/rsob.160333.


Enhanced Grain Iron Levels in Rice Expressing an IRON-REGULATED METAL TRANSPORTER, NICOTIANAMINE SYNTHASE, and FERRITIN Gene Cassette.

Boonyaves K, Wu TY, Gruissem W, Bhullar NK.

Front Plant Sci. 2017 Feb 7;8:130. doi: 10.3389/fpls.2017.00130. eCollection 2017.


Rationalising vitamin B6 biofortification in crop plants.

Fudge J, Mangel N, Gruissem W, Vanderschuren H, Fitzpatrick TB.

Curr Opin Biotechnol. 2017 Apr;44:130-137. doi: 10.1016/j.copbio.2016.12.004. Epub 2017 Jan 10. Review.


Meselect - A Rapid and Effective Method for the Separation of the Main Leaf Tissue Types.

Svozil J, Gruissem W, Baerenfaller K.

Front Plant Sci. 2016 Nov 15;7:1701. eCollection 2016.


Iron biofortification in the 21st century: setting realistic targets, overcoming obstacles, and new strategies for healthy nutrition.

Vasconcelos MW, Gruissem W, Bhullar NK.

Curr Opin Biotechnol. 2017 Apr;44:8-15. doi: 10.1016/j.copbio.2016.10.001. Epub 2016 Oct 22. Review.


Rice NICOTIANAMINE SYNTHASE 2 expression improves dietary iron and zinc levels in wheat.

Singh SP, Keller B, Gruissem W, Bhullar NK.

Theor Appl Genet. 2017 Feb;130(2):283-292. doi: 10.1007/s00122-016-2808-x. Epub 2016 Oct 8.


Diurnal changes in the histone H3 signature H3K9ac|H3K27ac|H3S28p are associated with diurnal gene expression in Arabidopsis.

Baerenfaller K, Shu H, Hirsch-Hoffmann M, Fütterer J, Opitz L, Rehrauer H, Hennig L, Gruissem W.

Plant Cell Environ. 2016 Nov;39(11):2557-2569. doi: 10.1111/pce.12811. Epub 2016 Sep 30.


Geographically Distinct and Domain-Specific Sequence Variations in the Alleles of Rice Blast Resistance Gene Pib.

Vasudevan K, Vera Cruz CM, Gruissem W, Bhullar NK.

Front Plant Sci. 2016 Jun 23;7:915. doi: 10.3389/fpls.2016.00915. eCollection 2016.


The Arabidopsis leaf transcriptome reveals distinct but also overlapping responses to colonization by phyllosphere commensals and pathogen infection with impact on plant health.

Vogel C, Bodenhausen N, Gruissem W, Vorholt JA.

New Phytol. 2016 Oct;212(1):192-207. doi: 10.1111/nph.14036. Epub 2016 Jun 16.


BRR2a Affects Flowering Time via FLC Splicing.

Mahrez W, Shin J, Muñoz-Viana R, Figueiredo DD, Trejo-Arellano MS, Exner V, Siretskiy A, Gruissem W, Köhler C, Hennig L.

PLoS Genet. 2016 Apr 21;12(4):e1005924. doi: 10.1371/journal.pgen.1005924. eCollection 2016 Apr.


Characterization of Brown Streak Virus-Resistant Cassava.

Anjanappa RB, Mehta D, Maruthi MN, Kanju E, Gruissem W, Vanderschuren H.

Mol Plant Microbe Interact. 2016 Jul;29(7):527-34. doi: 10.1094/MPMI-01-16-0027-R. Epub 2016 Jun 7.


H3K36ac Is an Evolutionary Conserved Plant Histone Modification That Marks Active Genes.

Mahrez W, Arellano MS, Moreno-Romero J, Nakamura M, Shu H, Nanni P, Köhler C, Gruissem W, Hennig L.

Plant Physiol. 2016 Mar;170(3):1566-77. doi: 10.1104/pp.15.01744. Epub 2016 Jan 13.


Corrigendum: Identification of novel alleles of the rice blast resistance gene Pi54.

Vasudevan K, Gruissem W, Bhullar NK.

Sci Rep. 2016 Jan 6;6:17920. doi: 10.1038/srep17920. No abstract available.


NOD promoter-controlled AtIRT1 expression functions synergistically with NAS and FERRITIN genes to increase iron in rice grains.

Boonyaves K, Gruissem W, Bhullar NK.

Plant Mol Biol. 2016 Feb;90(3):207-15. doi: 10.1007/s11103-015-0404-0. Epub 2015 Nov 11.


Identification of novel alleles of the rice blast resistance gene Pi54.

Vasudevan K, Gruissem W, Bhullar NK.

Sci Rep. 2015 Oct 26;5:15678. doi: 10.1038/srep15678. Erratum in: Sci Rep. 2016;6:17920.


Increased bioavailable vitamin B6 in field-grown transgenic cassava for dietary sufficiency.

Li KT, Moulin M, Mangel N, Albersen M, Verhoeven-Duif NM, Ma Q, Zhang P, Fitzpatrick TB, Gruissem W, Vanderschuren H.

Nat Biotechnol. 2015 Oct;33(10):1029-32. doi: 10.1038/nbt.3318. No abstract available.


Arabidopsis GERANYLGERANYL DIPHOSPHATE SYNTHASE 11 is a hub isozyme required for the production of most photosynthesis-related isoprenoids.

Ruiz-Sola MÁ, Coman D, Beck G, Barja MV, Colinas M, Graf A, Welsch R, Rütimann P, Bühlmann P, Bigler L, Gruissem W, Rodríguez-Concepción M, Vranová E.

New Phytol. 2016 Jan;209(1):252-64. doi: 10.1111/nph.13580. Epub 2015 Jul 30.


Proteasome targeting of proteins in Arabidopsis leaf mesophyll, epidermal and vascular tissues.

Svozil J, Gruissem W, Baerenfaller K.

Front Plant Sci. 2015 May 28;6:376. doi: 10.3389/fpls.2015.00376. eCollection 2015.


Chromatin assembly factor CAF-1 represses priming of plant defence response genes.

Mozgová I, Wildhaber T, Liu Q, Abou-Mansour E, L'Haridon F, Métraux JP, Gruissem W, Hofius D, Hennig L.

Nat Plants. 2015 Sep 1;1:15127. doi: 10.1038/nplants.2015.127.


Large scale germplasm screening for identification of novel rice blast resistance sources.

Vasudevan K, Vera Cruz CM, Gruissem W, Bhullar NK.

Front Plant Sci. 2014 Oct 2;5:505. doi: 10.3389/fpls.2014.00505. eCollection 2014.


Identification and characterization of chloroplast casein kinase II from Oryza sativa (rice).

Lu Q, Ding S, Reiland S, Rödiger A, Roschitzki B, Xue P, Gruissem W, Lu C, Baginsky S.

J Exp Bot. 2015 Jan;66(1):175-87. doi: 10.1093/jxb/eru405. Epub 2014 Oct 14.


ExpressionData - A public resource of high quality curated datasets representing gene expression across anatomy, development and experimental conditions.

Zimmermann P, Bleuler S, Laule O, Martin F, Ivanov NV, Campanoni P, Oishi K, Lugon-Moulin N, Wyss M, Hruz T, Gruissem W.

BioData Min. 2014 Aug 31;7:18. doi: 10.1186/1756-0381-7-18. eCollection 2014.


The environment exerts a greater influence than the transgene on the transcriptome of field-grown wheat expressing the Pm3b allele.

Quijano CD, Brunner S, Keller B, Gruissem W, Sautter C.

Transgenic Res. 2015 Feb;24(1):87-97. doi: 10.1007/s11248-014-9821-0. Epub 2014 Aug 6.


Distinct evolutionary strategies in the GGPPS family from plants.

Coman D, Altenhoff A, Zoller S, Gruissem W, Vranová E.

Front Plant Sci. 2014 May 27;5:230. doi: 10.3389/fpls.2014.00230. eCollection 2014.


Large-Scale Proteomics of the Cassava Storage Root and Identification of a Target Gene to Reduce Postharvest Deterioration.

Vanderschuren H, Nyaboga E, Poon JS, Baerenfaller K, Grossmann J, Hirsch-Hoffmann M, Kirchgessner N, Nanni P, Gruissem W.

Plant Cell. 2014 May;26(5):1913-1924. Epub 2014 May 29.


Glucan, Water Dikinase Exerts Little Control over Starch Degradation in Arabidopsis Leaves at Night.

Skeffington AW, Graf A, Duxbury Z, Gruissem W, Smith AM.

Plant Physiol. 2014 Jun;165(2):866-879. Epub 2014 Apr 29.


A flexible protocol for targeted gene co-expression network analysis.

Coman D, Rütimann P, Gruissem W.

Methods Mol Biol. 2014;1153:285-99. doi: 10.1007/978-1-4939-0606-2_21.


Protein abundance changes and ubiquitylation targets identified after inhibition of the proteasome with syringolin A.

Svozil J, Hirsch-Hoffmann M, Dudler R, Gruissem W, Baerenfaller K.

Mol Cell Proteomics. 2014 Jun;13(6):1523-36. doi: 10.1074/mcp.M113.036269. Epub 2014 Apr 13.


Arabidopsis replacement histone variant H3.3 occupies promoters of regulated genes.

Shu H, Nakamura M, Siretskiy A, Borghi L, Moraes I, Wildhaber T, Gruissem W, Hennig L.

Genome Biol. 2014 Mar 21;15(4):R62. doi: 10.1186/gb-2014-15-4-r62.


Arabidopsis RETINOBLASTOMA-RELATED and Polycomb group proteins: cooperation during plant cell differentiation and development.

Kuwabara A, Gruissem W.

J Exp Bot. 2014 Jun;65(10):2667-76. doi: 10.1093/jxb/eru069. Epub 2014 Mar 17. Review.


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